RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 TNFSF4P23510 183 aa11.55□□□□□ -0.56
VPS9D1-204ENST00000565023 LIPAP38571 399 aa11.55□□□□□ -0.56
VPS9D1-204ENST00000565023 DVL1P1P54792 670 aaPredicted RBP11.55□□□□□ -0.56
VPS9D1-204ENST00000565023 LMO4P61968 165 aa11.55□□□□□ -0.56
VPS9D1-204ENST00000565023 HIST1H3AP68431 136 aa11.55□□□□□ -0.56
VPS9D1-204ENST00000565023 PTGES3Q15185 160 aaKnown RBP11.55□□□□□ -0.56
VPS9D1-204ENST00000565023 HIST2H3PS2Q5TEC6 136 aa11.55□□□□□ -0.56
VPS9D1-204ENST00000565023 SLC18B1Q6NT16 456 aa11.55□□□□□ -0.56
VPS9D1-204ENST00000565023 Q6ZR03 302 aa11.55□□□□□ -0.56
VPS9D1-204ENST00000565023 HIST2H3AQ71DI3 136 aa11.55□□□□□ -0.56
VPS9D1-204ENST00000565023 CXXC5Q7LFL8 322 aaKnown RBP11.55□□□□□ -0.56
VPS9D1-204ENST00000565023 PQLC1Q8N2U9 271 aa11.55□□□□□ -0.56
VPS9D1-204ENST00000565023 BHLHE23Q8NDY6 225 aa11.55□□□□□ -0.56
VPS9D1-204ENST00000565023 ITLN1Q8WWA0 313 aa11.55□□□□□ -0.56
VPS9D1-204ENST00000565023 RAB1CQ92928 201 aa11.55□□□□□ -0.56
VPS9D1-204ENST00000565023 PTP4A1Q93096 173 aa11.55□□□□□ -0.56
VPS9D1-204ENST00000565023 TMEM186Q96B77 213 aa11.55□□□□□ -0.56
VPS9D1-204ENST00000565023 OTULINQ96BN8 352 aa11.55□□□□□ -0.56
VPS9D1-204ENST00000565023 CIB1Q99828 191 aa11.55□□□□□ -0.56
VPS9D1-204ENST00000565023 GAL3ST1Q99999 423 aa11.55□□□□□ -0.56
VPS9D1-204ENST00000565023 RBM4BQ9BQ04 359 aaKnown RBP11.55□□□□□ -0.56
VPS9D1-204ENST00000565023 HCAR1Q9BXC0 346 aa11.55□□□□□ -0.56
VPS9D1-204ENST00000565023 TEX12Q9BXU0 123 aa11.55□□□□□ -0.56
VPS9D1-204ENST00000565023 ZNF665Q9H7R5 613 aa11.55□□□□□ -0.56
VPS9D1-204ENST00000565023 HIF1ANQ9NWT6 349 aa11.55□□□□□ -0.56
VPS9D1-204ENST00000565023 MRPL22Q9NWU5 206 aaKnown RBP11.55□□□□□ -0.56
VPS9D1-204ENST00000565023 CGGBP1Q9UFW8 167 aaPredicted RBP11.55□□□□□ -0.56
VPS9D1-204ENST00000565023 KCNG2Q9UJ96 466 aa11.55□□□□□ -0.56
VPS9D1-204ENST00000565023 ZDHHC8Q9ULC8 765 aa11.55□□□□□ -0.56
VPS9D1-204ENST00000565023 N6AMT1Q9Y5N5 214 aa11.55□□□□□ -0.56
VPS9D1-204ENST00000565023 FAM183AA6NL82 134 aa11.54□□□□□ -0.56
VPS9D1-204ENST00000565023 ANKRD65E5RJM6 399 aa11.54□□□□□ -0.56
VPS9D1-204ENST00000565023 LCATP04180 440 aa11.54□□□□□ -0.56
VPS9D1-204ENST00000565023 MSMBP08118 114 aa11.54□□□□□ -0.56
VPS9D1-204ENST00000565023 CLUP10909 449 aa11.54□□□□□ -0.56
VPS9D1-204ENST00000565023 KITLGP21583 273 aa11.54□□□□□ -0.56
VPS9D1-204ENST00000565023 EPHA2P29317 976 aa11.54□□□□□ -0.56
VPS9D1-204ENST00000565023 GGT2P36268 569 aa11.54□□□□□ -0.56
VPS9D1-204ENST00000565023 RGS6P49758 472 aa11.54□□□□□ -0.56
VPS9D1-204ENST00000565023 BLVRAP53004 296 aa11.54□□□□□ -0.56
VPS9D1-204ENST00000565023 LINC01590Q5TEZ4 76 aa11.54□□□□□ -0.56
VPS9D1-204ENST00000565023 FAHD2BQ6P2I3 314 aaPredicted RBP11.54□□□□□ -0.56
VPS9D1-204ENST00000565023 NAA40Q86UY6 237 aa11.54□□□□□ -0.56
VPS9D1-204ENST00000565023 OR10AD1Q8NGE0 317 aa11.54□□□□□ -0.56
VPS9D1-204ENST00000565023 OR5L1Q8NGL2 311 aa11.54□□□□□ -0.56
VPS9D1-204ENST00000565023 OR51F2Q8NH61 342 aa11.54□□□□□ -0.56
VPS9D1-204ENST00000565023 APOBEC3DQ96AK3 386 aaPredicted RBP11.54□□□□□ -0.56
VPS9D1-204ENST00000565023 HAVCR1Q96D42 359 aa11.54□□□□□ -0.56
VPS9D1-204ENST00000565023 RAB39BQ96DA2 213 aa11.54□□□□□ -0.56
VPS9D1-204ENST00000565023 FAHD2AQ96GK7 314 aa11.54□□□□□ -0.56
VPS9D1-204ENST00000565023 COG8Q96MW5 612 aa11.54□□□□□ -0.56
VPS9D1-204ENST00000565023 DIRC2Q96SL1 478 aa11.54□□□□□ -0.56
VPS9D1-204ENST00000565023 ATF6BQ99941 703 aa11.54□□□□□ -0.56
VPS9D1-204ENST00000565023 MED20Q9H944 212 aa11.54□□□□□ -0.56
VPS9D1-204ENST00000565023 USE1Q9NZ43 259 aa11.54□□□□□ -0.56
VPS9D1-204ENST00000565023 CYB5R1Q9UHQ9 305 aa11.54□□□□□ -0.56
VPS9D1-204ENST00000565023 WNK2Q9Y3S1 2297 aa11.53□□□□□ -0.56
VPS9D1-204ENST00000565023 ZAR1LA6NP61 321 aa11.53□□□□□ -0.56
VPS9D1-204ENST00000565023 PRR23D1E9PI22 279 aaPredicted RBP11.53□□□□□ -0.56
VPS9D1-204ENST00000565023 H0YL77 283 aa11.53□□□□□ -0.56
VPS9D1-204ENST00000565023 EI24O14681 340 aa11.53□□□□□ -0.56
VPS9D1-204ENST00000565023 ALPLP05186 524 aa11.53□□□□□ -0.56
VPS9D1-204ENST00000565023 SPARCP09486 303 aa11.53□□□□□ -0.56
VPS9D1-204ENST00000565023 SBK2P0C263 348 aa11.53□□□□□ -0.56
VPS9D1-204ENST00000565023 PRR23D2P0DMB1 279 aaPredicted RBP11.53□□□□□ -0.56
VPS9D1-204ENST00000565023 PSKH1P11801 424 aa11.53□□□□□ -0.56
VPS9D1-204ENST00000565023 RAC2P15153 192 aa11.53□□□□□ -0.56
VPS9D1-204ENST00000565023 PAICSP22234 425 aaKnown RBP11.53□□□□□ -0.56
VPS9D1-204ENST00000565023 FMO3P31513 532 aa11.53□□□□□ -0.56
VPS9D1-204ENST00000565023 SLC6A9P48067 706 aa11.53□□□□□ -0.56
VPS9D1-204ENST00000565023 SLC3A1Q07837 685 aa11.53□□□□□ -0.56
VPS9D1-204ENST00000565023 CDK5R2Q13319 367 aa11.53□□□□□ -0.56
VPS9D1-204ENST00000565023 PCK2Q16822 640 aa11.53□□□□□ -0.56
VPS9D1-204ENST00000565023 SLX4IPQ5VYV7 408 aa11.53□□□□□ -0.56
VPS9D1-204ENST00000565023 PLBD1Q6P4A8 553 aa11.53□□□□□ -0.56
VPS9D1-204ENST00000565023 SPATC1Q76KD6 591 aa11.53□□□□□ -0.56
VPS9D1-204ENST00000565023 PEG10Q86TG7 708 aaKnown RBP11.53□□□□□ -0.56
VPS9D1-204ENST00000565023 ZNF511Q8NB15 262 aa11.53□□□□□ -0.56
VPS9D1-204ENST00000565023 OR6K6Q8NGW6 343 aa11.53□□□□□ -0.56
VPS9D1-204ENST00000565023 STMN2Q93045 179 aa11.53□□□□□ -0.56
VPS9D1-204ENST00000565023 C1orf159Q96HA4 380 aa11.53□□□□□ -0.56
VPS9D1-204ENST00000565023 MAP6Q96JE9 813 aa11.53□□□□□ -0.56
VPS9D1-204ENST00000565023 OR2V2Q96R30 315 aa11.53□□□□□ -0.56
VPS9D1-204ENST00000565023 GABARAPL3Q9BY60 117 aa11.53□□□□□ -0.56
VPS9D1-204ENST00000565023 TVP23BQ9NYZ1 205 aa11.53□□□□□ -0.56
VPS9D1-204ENST00000565023 ATPIF1Q9UII2 106 aa11.53□□□□□ -0.56
VPS9D1-204ENST00000565023 PRODHO43272 600 aa11.52□□□□□ -0.57
VPS9D1-204ENST00000565023 GLCEO94923 617 aa11.52□□□□□ -0.57
VPS9D1-204ENST00000565023 IGHV2-5P01817 119 aa11.52□□□□□ -0.57
VPS9D1-204ENST00000565023 CD55P08174 381 aa11.52□□□□□ -0.57
VPS9D1-204ENST00000565023 ADH4P08319 380 aa11.52□□□□□ -0.57
VPS9D1-204ENST00000565023 ACSM4P0C7M7 580 aa11.52□□□□□ -0.57
VPS9D1-204ENST00000565023 TNFRSF1AP19438 455 aa11.52□□□□□ -0.57
VPS9D1-204ENST00000565023 PCMT1P22061 227 aa11.52□□□□□ -0.57
VPS9D1-204ENST00000565023 TUBG1P23258 451 aa11.52□□□□□ -0.57
VPS9D1-204ENST00000565023 POLR2IP36954 125 aaKnown RBP11.52□□□□□ -0.57
VPS9D1-204ENST00000565023 ALDH3A2P51648 485 aa11.52□□□□□ -0.57
VPS9D1-204ENST00000565023 PRKXP51817 358 aa11.52□□□□□ -0.57
VPS9D1-204ENST00000565023 TPTEP56180 551 aa11.52□□□□□ -0.57
VPS9D1-204ENST00000565023 EFNB1P98172 346 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms