RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 WIPF1O43516 503 aa15.57■□□□□ 0.08
CLN6-204ENST00000564752 RAC2P15153 192 aa15.57■□□□□ 0.08
CLN6-204ENST00000564752 TNFRSF1AP19438 455 aa15.57■□□□□ 0.08
CLN6-204ENST00000564752 FPR2P25090 351 aa15.57■□□□□ 0.08
CLN6-204ENST00000564752 GGT2P36268 569 aa15.57■□□□□ 0.08
CLN6-204ENST00000564752 RBMXP38159 391 aaKnown RBP15.57■□□□□ 0.08
CLN6-204ENST00000564752 ERFP50548 548 aa15.57■□□□□ 0.08
CLN6-204ENST00000564752 ECH1Q13011 328 aa15.57■□□□□ 0.08
CLN6-204ENST00000564752 TMEM155Q4W5P6 130 aa15.57■□□□□ 0.08
CLN6-204ENST00000564752 LRRC28Q86X40 367 aaPredicted RBP15.57■□□□□ 0.08
CLN6-204ENST00000564752 C3orf56Q8N813 242 aa15.57■□□□□ 0.08
CLN6-204ENST00000564752 ZDHHC22Q8N966 263 aa15.57■□□□□ 0.08
CLN6-204ENST00000564752 OR9Q1Q8NGQ5 310 aa15.57■□□□□ 0.08
CLN6-204ENST00000564752 OR4Q3Q8NH05 313 aa15.57■□□□□ 0.08
CLN6-204ENST00000564752 DVL3Q92997 716 aaPredicted RBP15.57■□□□□ 0.08
CLN6-204ENST00000564752 MMP26Q9NRE1 261 aa15.57■□□□□ 0.08
CLN6-204ENST00000564752 IL19Q9UHD0 177 aa15.57■□□□□ 0.08
CLN6-204ENST00000564752 F5H5K5 113 aa15.56■□□□□ 0.08
CLN6-204ENST00000564752 GNGT2O14610 69 aa15.56■□□□□ 0.08
CLN6-204ENST00000564752 IFNGP01579 166 aa15.56■□□□□ 0.08
CLN6-204ENST00000564752 HOXB6P17509 224 aaKnown RBP15.56■□□□□ 0.08
CLN6-204ENST00000564752 CRMP1Q14194 572 aa15.56■□□□□ 0.08
CLN6-204ENST00000564752 FLOT2Q14254 428 aa15.56■□□□□ 0.08
CLN6-204ENST00000564752 HLXQ14774 488 aaPredicted RBP15.56■□□□□ 0.08
CLN6-204ENST00000564752 FBXW12Q6X9E4 464 aa15.56■□□□□ 0.08
CLN6-204ENST00000564752 SPATA24Q86W54 205 aa15.56■□□□□ 0.08
CLN6-204ENST00000564752 OR5AS1Q8N127 324 aa15.56■□□□□ 0.08
CLN6-204ENST00000564752 KLHL36Q8N4N3 616 aa15.56■□□□□ 0.08
CLN6-204ENST00000564752 SPICQ8N5J4 248 aa15.56■□□□□ 0.08
CLN6-204ENST00000564752 DEFB108BQ8NET1 73 aa15.56■□□□□ 0.08
CLN6-204ENST00000564752 OR51L1Q8NGJ5 315 aa15.56■□□□□ 0.08
CLN6-204ENST00000564752 TEX47Q8TBZ9 253 aa15.56■□□□□ 0.08
CLN6-204ENST00000564752 GIPC3Q8TF64 312 aa15.56■□□□□ 0.08
CLN6-204ENST00000564752 CANT1Q8WVQ1 401 aa15.56■□□□□ 0.08
CLN6-204ENST00000564752 DDOQ99489 341 aa15.56■□□□□ 0.08
CLN6-204ENST00000564752 NIPSNAP1Q9BPW8 284 aa15.56■□□□□ 0.08
CLN6-204ENST00000564752 NTN4Q9HB63 628 aa15.56■□□□□ 0.08
CLN6-204ENST00000564752 PATZ1Q9HBE1 687 aaKnown RBP15.56■□□□□ 0.08
CLN6-204ENST00000564752 ARRDC5A6NEK1 342 aa15.55■□□□□ 0.08
CLN6-204ENST00000564752 TVP23AA6NH52 213 aa15.55■□□□□ 0.08
CLN6-204ENST00000564752 RIIAD1A6NNX1 92 aa15.55■□□□□ 0.08
CLN6-204ENST00000564752 TRAPPC2LH3BP13 241 aa15.55■□□□□ 0.08
CLN6-204ENST00000564752 SURF4O15260 269 aa15.55■□□□□ 0.08
CLN6-204ENST00000564752 SPRY1O43609 319 aaPredicted RBP15.55■□□□□ 0.08
CLN6-204ENST00000564752 ACSM4P0C7M7 580 aa15.55■□□□□ 0.08
CLN6-204ENST00000564752 RPS27P42677 84 aaKnown RBP15.55■□□□□ 0.08
CLN6-204ENST00000564752 SLC6A9P48067 706 aa15.55■□□□□ 0.08
CLN6-204ENST00000564752 BTG1P62324 171 aa15.55■□□□□ 0.08
CLN6-204ENST00000564752 ZMYND11Q15326 602 aa15.55■□□□□ 0.08
CLN6-204ENST00000564752 TUSC1Q2TAM9 212 aa15.55■□□□□ 0.08
CLN6-204ENST00000564752 ZNF362Q5T0B9 420 aaPredicted RBP15.55■□□□□ 0.08
CLN6-204ENST00000564752 OR2T2Q6IF00 324 aa15.55■□□□□ 0.08
CLN6-204ENST00000564752 ITLN1Q8WWA0 313 aa15.55■□□□□ 0.08
CLN6-204ENST00000564752 C22orf15Q8WYQ4 148 aa15.55■□□□□ 0.08
CLN6-204ENST00000564752 ZMYND19Q96E35 227 aaPredicted RBP15.55■□□□□ 0.08
CLN6-204ENST00000564752 SIGLEC11Q96RL6 698 aa15.55■□□□□ 0.08
CLN6-204ENST00000564752 FEVQ99581 238 aa15.55■□□□□ 0.08
CLN6-204ENST00000564752 PNRC2Q9NPJ4 139 aaKnown RBP15.55■□□□□ 0.08
CLN6-204ENST00000564752 PPP1R3CQ9UQK1 317 aa15.55■□□□□ 0.08
CLN6-204ENST00000564752 COMMD3-BMI1R4GMX3 469 aa15.55■□□□□ 0.08
CLN6-204ENST00000564752 H3BN98 237 aa15.54■□□□□ 0.08
CLN6-204ENST00000564752 E2F6O75461 281 aa15.54■□□□□ 0.08
CLN6-204ENST00000564752 ZNF3P17036 446 aa15.54■□□□□ 0.08
CLN6-204ENST00000564752 EGR1P18146 543 aa15.54■□□□□ 0.08
CLN6-204ENST00000564752 SLC25A1P53007 311 aa15.54■□□□□ 0.08
CLN6-204ENST00000564752 UBA52P62987 128 aaKnown RBP15.54■□□□□ 0.08
CLN6-204ENST00000564752 ZNF154Q13106 437 aa15.54■□□□□ 0.08
CLN6-204ENST00000564752 KRTAP27-1Q3LI81 207 aa15.54■□□□□ 0.08
CLN6-204ENST00000564752 LYPD4Q6UWN0 246 aa15.54■□□□□ 0.08
CLN6-204ENST00000564752 CD300LDQ6UXZ3 194 aa15.54■□□□□ 0.08
CLN6-204ENST00000564752 ATG16L2Q8NAA4 619 aa15.54■□□□□ 0.08
CLN6-204ENST00000564752 OR6K6Q8NGW6 343 aa15.54■□□□□ 0.08
CLN6-204ENST00000564752 ZNRF4Q8WWF5 429 aa15.54■□□□□ 0.08
CLN6-204ENST00000564752 SLC7A6OSQ96CW6 309 aaPredicted RBP15.54■□□□□ 0.08
CLN6-204ENST00000564752 MAP6Q96JE9 813 aa15.54■□□□□ 0.08
CLN6-204ENST00000564752 ZNF582Q96NG8 517 aaPredicted RBP15.54■□□□□ 0.08
CLN6-204ENST00000564752 OR2V2Q96R30 315 aa15.54■□□□□ 0.08
CLN6-204ENST00000564752 HCAR1Q9BXC0 346 aa15.54■□□□□ 0.08
CLN6-204ENST00000564752 C1QTNF5Q9BXJ0 243 aa15.54■□□□□ 0.08
CLN6-204ENST00000564752 WDR76Q9H967 626 aa15.54■□□□□ 0.08
CLN6-204ENST00000564752 AUP1Q9Y679 476 aa15.54■□□□□ 0.08
CLN6-204ENST00000564752 F5H0A9 414 aaPredicted RBP15.53■□□□□ 0.08
CLN6-204ENST00000564752 TMEM178BH3BS89 294 aa15.53■□□□□ 0.08
CLN6-204ENST00000564752 M0R135 149 aa15.53■□□□□ 0.08
CLN6-204ENST00000564752 DNAJC8O75937 253 aaPredicted RBP15.53■□□□□ 0.08
CLN6-204ENST00000564752 LCATP04180 440 aa15.53■□□□□ 0.08
CLN6-204ENST00000564752 GYPBP06028 91 aa15.53■□□□□ 0.08
CLN6-204ENST00000564752 SPARCP09486 303 aa15.53■□□□□ 0.08
CLN6-204ENST00000564752 ZNF12P17014 697 aa15.53■□□□□ 0.08
CLN6-204ENST00000564752 SPI1P17947 270 aa15.53■□□□□ 0.08
CLN6-204ENST00000564752 FMO3P31513 532 aa15.53■□□□□ 0.08
CLN6-204ENST00000564752 TPTEP56180 551 aa15.53■□□□□ 0.08
CLN6-204ENST00000564752 SEC61A1P61619 476 aaKnown RBP15.53■□□□□ 0.08
CLN6-204ENST00000564752 MALLQ13021 153 aa15.53■□□□□ 0.08
CLN6-204ENST00000564752 RSPO1Q2MKA7 263 aaPredicted RBP15.53■□□□□ 0.08
CLN6-204ENST00000564752 COLCA1Q6ZS62 124 aa15.53■□□□□ 0.08
CLN6-204ENST00000564752 BHLHE23Q8NDY6 225 aa15.53■□□□□ 0.08
CLN6-204ENST00000564752 OR8G5Q8NG78 346 aa15.53■□□□□ 0.08
CLN6-204ENST00000564752 OR10AD1Q8NGE0 317 aa15.53■□□□□ 0.08
CLN6-204ENST00000564752 SGMS2Q8NHU3 365 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms