RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 ULK3Q6PHR2 472 aa2.21□□□□□ -2.06
UBR1-205ENST00000564540 DUX4L9Q6RFH8 374 aaPredicted RBP2.21□□□□□ -2.06
UBR1-205ENST00000564540 COMTD1Q86VU5 262 aa2.21□□□□□ -2.06
UBR1-205ENST00000564540 CMTM1Q8IZ96 169 aa2.21□□□□□ -2.06
UBR1-205ENST00000564540 JAGN1Q8N5M9 183 aa2.21□□□□□ -2.06
UBR1-205ENST00000564540 TTC29Q8NA56 475 aaPredicted RBP2.21□□□□□ -2.06
UBR1-205ENST00000564540 GATSQ8NAP1 163 aa2.21□□□□□ -2.06
UBR1-205ENST00000564540 FBXO36Q8NEA4 188 aa2.21□□□□□ -2.06
UBR1-205ENST00000564540 OR5B3Q8NH48 314 aa2.21□□□□□ -2.06
UBR1-205ENST00000564540 LYPD6BQ8NI32 183 aa2.21□□□□□ -2.06
UBR1-205ENST00000564540 LRRC20Q8TCA0 184 aa2.21□□□□□ -2.06
UBR1-205ENST00000564540 NRBF2Q96F24 287 aa2.21□□□□□ -2.06
UBR1-205ENST00000564540 MED8Q96G25 268 aa2.21□□□□□ -2.06
UBR1-205ENST00000564540 JSRP1Q96MG2 331 aaPredicted RBP2.21□□□□□ -2.06
UBR1-205ENST00000564540 CSPG4P5Q96PW8 444 aa2.21□□□□□ -2.06
UBR1-205ENST00000564540 CHID1Q9BWS9 393 aa2.21□□□□□ -2.06
UBR1-205ENST00000564540 HINT2Q9BX68 163 aa2.21□□□□□ -2.06
UBR1-205ENST00000564540 PRRG3Q9BZD7 231 aa2.21□□□□□ -2.06
UBR1-205ENST00000564540 TM6SF2Q9BZW4 377 aa2.21□□□□□ -2.06
UBR1-205ENST00000564540 ACTR3CQ9C0K3 210 aaPredicted RBP2.21□□□□□ -2.06
UBR1-205ENST00000564540 MFFQ9GZY8 342 aa2.21□□□□□ -2.06
UBR1-205ENST00000564540 CWH43Q9H720 699 aa2.21□□□□□ -2.06
UBR1-205ENST00000564540 BEX1Q9HBH7 125 aa2.21□□□□□ -2.06
UBR1-205ENST00000564540 CNTNAP1P78357 1384 aa2.21□□□□□ -2.06
UBR1-205ENST00000564540 CENPJQ9HC77 1338 aaPredicted RBP2.2□□□□□ -2.06
UBR1-205ENST00000564540 GSTTP1A0A1W2PQM5 241 aa2.2□□□□□ -2.06
UBR1-205ENST00000564540 A0A1W2PRD5 423 aa2.2□□□□□ -2.06
UBR1-205ENST00000564540 A8MUU9 505 aa2.2□□□□□ -2.06
UBR1-205ENST00000564540 ZNF207O43670 478 aaKnown RBP2.2□□□□□ -2.06
UBR1-205ENST00000564540 SOX15O60248 233 aa2.2□□□□□ -2.06
UBR1-205ENST00000564540 GMDSO60547 372 aa2.2□□□□□ -2.06
UBR1-205ENST00000564540 EEDO75530 441 aaKnown RBP2.2□□□□□ -2.06
UBR1-205ENST00000564540 CCNKO75909 580 aa2.2□□□□□ -2.06
UBR1-205ENST00000564540 GABARAPO95166 117 aa2.2□□□□□ -2.06
UBR1-205ENST00000564540 PMCHP20382 165 aa2.2□□□□□ -2.06
UBR1-205ENST00000564540 GABRR2P28476 465 aa2.2□□□□□ -2.06
UBR1-205ENST00000564540 ANP32AP39687 249 aaKnown RBP2.2□□□□□ -2.06
UBR1-205ENST00000564540 KRTAP12-4P60329 112 aa2.2□□□□□ -2.06
UBR1-205ENST00000564540 PON3Q15166 354 aa2.2□□□□□ -2.06
UBR1-205ENST00000564540 SYCP1Q15431 976 aa2.2□□□□□ -2.06
UBR1-205ENST00000564540 TSC22D1Q15714 1073 aa2.2□□□□□ -2.06
UBR1-205ENST00000564540 GABRA6Q16445 453 aa2.2□□□□□ -2.06
UBR1-205ENST00000564540 POU2AF1Q16633 256 aa2.2□□□□□ -2.06
UBR1-205ENST00000564540 ANKRD26P1Q6NSI1 321 aa2.2□□□□□ -2.06
UBR1-205ENST00000564540 TTC23LQ6PF05 361 aa2.2□□□□□ -2.06
UBR1-205ENST00000564540 COPS6Q7L5N1 327 aa2.2□□□□□ -2.06
UBR1-205ENST00000564540 ST13P4Q8IZP2 240 aaPredicted RBP2.2□□□□□ -2.06
UBR1-205ENST00000564540 TRAM1L1Q8N609 369 aa2.2□□□□□ -2.06
UBR1-205ENST00000564540 INO80EQ8NBZ0 244 aaPredicted RBP2.2□□□□□ -2.06
UBR1-205ENST00000564540 SUN5Q8TC36 379 aa2.2□□□□□ -2.06
UBR1-205ENST00000564540 SLC7A13Q8TCU3 470 aa2.2□□□□□ -2.06
UBR1-205ENST00000564540 STMN2Q93045 179 aa2.2□□□□□ -2.06
UBR1-205ENST00000564540 HSFY1Q96LI6 401 aa2.2□□□□□ -2.06
UBR1-205ENST00000564540 SORT1Q99523 831 aa2.2□□□□□ -2.06
UBR1-205ENST00000564540 SH3GL1Q99961 368 aa2.2□□□□□ -2.06
UBR1-205ENST00000564540 ACBD6Q9BR61 282 aa2.2□□□□□ -2.06
UBR1-205ENST00000564540 ADA2Q9NZK5 511 aa2.2□□□□□ -2.06
UBR1-205ENST00000564540 CTSFQ9UBX1 484 aa2.2□□□□□ -2.06
UBR1-205ENST00000564540 UBN2Q6ZU65 1347 aa2.19□□□□□ -2.06
UBR1-205ENST00000564540 TNS2Q63HR2 1409 aa2.19□□□□□ -2.06
UBR1-205ENST00000564540 TMEM223A0PJW6 202 aa2.19□□□□□ -2.06
UBR1-205ENST00000564540 IQCF5A8MTL0 148 aa2.19□□□□□ -2.06
UBR1-205ENST00000564540 CDC7O00311 574 aa2.19□□□□□ -2.06
UBR1-205ENST00000564540 RAD51BO15315 384 aa2.19□□□□□ -2.06
UBR1-205ENST00000564540 ERLIN2O94905 339 aa2.19□□□□□ -2.06
UBR1-205ENST00000564540 FGFR1OPO95684 399 aaKnown RBP2.19□□□□□ -2.06
UBR1-205ENST00000564540 CLIC3O95833 236 aa2.19□□□□□ -2.06
UBR1-205ENST00000564540 OXTP01178 125 aa2.19□□□□□ -2.06
UBR1-205ENST00000564540 IGKV1D-16P01601 117 aa2.19□□□□□ -2.06
UBR1-205ENST00000564540 SERPINA5P05154 406 aa2.19□□□□□ -2.06
UBR1-205ENST00000564540 CCNOP22674 350 aa2.19□□□□□ -2.06
UBR1-205ENST00000564540 FOXN2P32314 431 aa2.19□□□□□ -2.06
UBR1-205ENST00000564540 AQP2P41181 271 aa2.19□□□□□ -2.06
UBR1-205ENST00000564540 SSR4P51571 173 aa2.19□□□□□ -2.06
UBR1-205ENST00000564540 ATP6V0D1P61421 351 aa2.19□□□□□ -2.06
UBR1-205ENST00000564540 TNNC1P63316 161 aa2.19□□□□□ -2.06
UBR1-205ENST00000564540 LOXL1Q08397 574 aaPredicted RBP2.19□□□□□ -2.06
UBR1-205ENST00000564540 SIGLEC14Q08ET2 396 aa2.19□□□□□ -2.06
UBR1-205ENST00000564540 TRDNQ13061 729 aa2.19□□□□□ -2.06
UBR1-205ENST00000564540 NCF4Q15080 339 aa2.19□□□□□ -2.06
UBR1-205ENST00000564540 RPEL1Q2QD12 228 aa2.19□□□□□ -2.06
UBR1-205ENST00000564540 ERICH5Q6P6B1 374 aa2.19□□□□□ -2.06
UBR1-205ENST00000564540 SPESP1Q6UW49 350 aa2.19□□□□□ -2.06
UBR1-205ENST00000564540 NDUFAF7Q7L592 441 aa2.19□□□□□ -2.06
UBR1-205ENST00000564540 LHFPL3Q86UP9 236 aa2.19□□□□□ -2.06
UBR1-205ENST00000564540 LRP11Q86VZ4 500 aa2.19□□□□□ -2.06
UBR1-205ENST00000564540 SPATA24Q86W54 205 aa2.19□□□□□ -2.06
UBR1-205ENST00000564540 RBM45Q8IUH3 476 aaKnown RBP2.19□□□□□ -2.06
UBR1-205ENST00000564540 CD302Q8IX05 232 aa2.19□□□□□ -2.06
UBR1-205ENST00000564540 PUSL1Q8N0Z8 303 aaKnown RBP2.19□□□□□ -2.06
UBR1-205ENST00000564540 PDIK1LQ8N165 341 aa2.19□□□□□ -2.06
UBR1-205ENST00000564540 LIX1Q8N485 282 aa2.19□□□□□ -2.06
UBR1-205ENST00000564540 EID2Q8N6I1 236 aa2.19□□□□□ -2.06
UBR1-205ENST00000564540 ZNF557Q8N988 423 aaPredicted RBP2.19□□□□□ -2.06
UBR1-205ENST00000564540 OR2G2Q8NGZ5 317 aa2.19□□□□□ -2.06
UBR1-205ENST00000564540 TCP10LQ8TDR4 215 aa2.19□□□□□ -2.06
UBR1-205ENST00000564540 C9orf72Q96LT7 481 aa2.19□□□□□ -2.06
UBR1-205ENST00000564540 KCNS3Q9BQ31 491 aa2.19□□□□□ -2.06
UBR1-205ENST00000564540 LLPHQ9BRT6 129 aaKnown RBP2.19□□□□□ -2.06
UBR1-205ENST00000564540 OSBPL10Q9BXB5 764 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms