RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 NLRC3Q7RTR2 1065 aa12.59□□□□□ -0.39
SPG7-210ENST00000564409 PIGWQ7Z7B1 504 aa12.59□□□□□ -0.39
SPG7-210ENST00000564409 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.59□□□□□ -0.39
SPG7-210ENST00000564409 DEFB107AQ8IZN7 70 aa12.59□□□□□ -0.39
SPG7-210ENST00000564409 OR10AD1Q8NGE0 317 aa12.59□□□□□ -0.39
SPG7-210ENST00000564409 OR52E2Q8NGJ4 325 aa12.59□□□□□ -0.39
SPG7-210ENST00000564409 OR4C15Q8NGM1 316 aa12.59□□□□□ -0.39
SPG7-210ENST00000564409 Q8TCH9 128 aa12.59□□□□□ -0.39
SPG7-210ENST00000564409 SSBP3Q9BWW4 388 aaPredicted RBP12.59□□□□□ -0.39
SPG7-210ENST00000564409 MUC13Q9H3R2 512 aa12.59□□□□□ -0.39
SPG7-210ENST00000564409 TMEM165Q9HC07 324 aa12.59□□□□□ -0.39
SPG7-210ENST00000564409 MMP26Q9NRE1 261 aa12.59□□□□□ -0.39
SPG7-210ENST00000564409 ACTR3BQ9P1U1 418 aa12.59□□□□□ -0.39
SPG7-210ENST00000564409 BAIAP2Q9UQB8 552 aa12.59□□□□□ -0.39
SPG7-210ENST00000564409 F5H5P2 479 aa12.58□□□□□ -0.4
SPG7-210ENST00000564409 M0R135 149 aa12.58□□□□□ -0.4
SPG7-210ENST00000564409 MLNRO43193 412 aa12.58□□□□□ -0.4
SPG7-210ENST00000564409 RPS2P15880 293 aaKnown RBP12.58□□□□□ -0.4
SPG7-210ENST00000564409 CD200P41217 278 aa12.58□□□□□ -0.4
SPG7-210ENST00000564409 UBA52P62987 128 aaKnown RBP12.58□□□□□ -0.4
SPG7-210ENST00000564409 MXRA7P84157 204 aa12.58□□□□□ -0.4
SPG7-210ENST00000564409 BTNL3Q6UXE8 466 aa12.58□□□□□ -0.4
SPG7-210ENST00000564409 PGAP1Q75T13 922 aa12.58□□□□□ -0.4
SPG7-210ENST00000564409 KLBQ86Z14 1044 aa12.58□□□□□ -0.4
SPG7-210ENST00000564409 LINC00346Q8IVM7 164 aa12.58□□□□□ -0.4
SPG7-210ENST00000564409 ZDHHC22Q8N966 263 aa12.58□□□□□ -0.4
SPG7-210ENST00000564409 PLPP7Q8NBV4 271 aa12.58□□□□□ -0.4
SPG7-210ENST00000564409 BHLHE23Q8NDY6 225 aa12.58□□□□□ -0.4
SPG7-210ENST00000564409 SDR9C7Q8NEX9 313 aa12.58□□□□□ -0.4
SPG7-210ENST00000564409 OR11L1Q8NGX0 322 aa12.58□□□□□ -0.4
SPG7-210ENST00000564409 SGMS2Q8NHU3 365 aa12.58□□□□□ -0.4
SPG7-210ENST00000564409 SPRYD4Q8WW59 207 aaPredicted RBP12.58□□□□□ -0.4
SPG7-210ENST00000564409 NEIL1Q96FI4 390 aaPredicted RBP12.58□□□□□ -0.4
SPG7-210ENST00000564409 ZNF799Q96GE5 643 aa12.58□□□□□ -0.4
SPG7-210ENST00000564409 MAGIXQ9H6Y5 334 aa12.58□□□□□ -0.4
SPG7-210ENST00000564409 PNRC2Q9NPJ4 139 aaKnown RBP12.58□□□□□ -0.4
SPG7-210ENST00000564409 ARL8BQ9NVJ2 186 aa12.58□□□□□ -0.4
SPG7-210ENST00000564409 LYVE1Q9Y5Y7 322 aa12.58□□□□□ -0.4
SPG7-210ENST00000564409 TNFRSF11BO00300 401 aa12.57□□□□□ -0.4
SPG7-210ENST00000564409 BHLHE40O14503 412 aa12.57□□□□□ -0.4
SPG7-210ENST00000564409 GMDSO60547 372 aa12.57□□□□□ -0.4
SPG7-210ENST00000564409 OTX1P32242 354 aaPredicted RBP12.57□□□□□ -0.4
SPG7-210ENST00000564409 MSX2P35548 267 aaPredicted RBP12.57□□□□□ -0.4
SPG7-210ENST00000564409 MAGEA2P43356 314 aa12.57□□□□□ -0.4
SPG7-210ENST00000564409 BLVRAP53004 296 aa12.57□□□□□ -0.4
SPG7-210ENST00000564409 RAD23AP54725 363 aa12.57□□□□□ -0.4
SPG7-210ENST00000564409 SEC61A1P61619 476 aaKnown RBP12.57□□□□□ -0.4
SPG7-210ENST00000564409 GNB2P62879 340 aa12.57□□□□□ -0.4
SPG7-210ENST00000564409 PAX2Q02962 417 aa12.57□□□□□ -0.4
SPG7-210ENST00000564409 GK3PQ14409 553 aa12.57□□□□□ -0.4
SPG7-210ENST00000564409 KCNJ8Q15842 424 aa12.57□□□□□ -0.4
SPG7-210ENST00000564409 ZNF404Q494X3 552 aa12.57□□□□□ -0.4
SPG7-210ENST00000564409 SLC35F1Q5T1Q4 408 aa12.57□□□□□ -0.4
SPG7-210ENST00000564409 DRAM2Q6UX65 266 aa12.57□□□□□ -0.4
SPG7-210ENST00000564409 RASSF6Q6ZTQ3 369 aa12.57□□□□□ -0.4
SPG7-210ENST00000564409 MRPL21Q7Z2W9 205 aaKnown RBP12.57□□□□□ -0.4
SPG7-210ENST00000564409 MOGAT3Q86VF5 341 aa12.57□□□□□ -0.4
SPG7-210ENST00000564409 LNX2Q8N448 690 aa12.57□□□□□ -0.4
SPG7-210ENST00000564409 PROKR2Q8NFJ6 384 aa12.57□□□□□ -0.4
SPG7-210ENST00000564409 OR8B3Q8NGG8 313 aa12.57□□□□□ -0.4
SPG7-210ENST00000564409 ZNF420Q8TAQ5 688 aaPredicted RBP12.57□□□□□ -0.4
SPG7-210ENST00000564409 RAB40AQ8WXH6 277 aa12.57□□□□□ -0.4
SPG7-210ENST00000564409 OR8B2Q96RD0 313 aa12.57□□□□□ -0.4
SPG7-210ENST00000564409 DDOQ99489 341 aa12.57□□□□□ -0.4
SPG7-210ENST00000564409 TMEM246Q9BRR3 403 aa12.57□□□□□ -0.4
SPG7-210ENST00000564409 OPA3Q9H6K4 179 aa12.57□□□□□ -0.4
SPG7-210ENST00000564409 TRIM36Q9NQ86 728 aa12.57□□□□□ -0.4
SPG7-210ENST00000564409 MRPL22Q9NWU5 206 aaKnown RBP12.57□□□□□ -0.4
SPG7-210ENST00000564409 PPIAL4AQ9Y536 164 aa12.57□□□□□ -0.4
SPG7-210ENST00000564409 H0YL77 283 aa12.56□□□□□ -0.4
SPG7-210ENST00000564409 PHYHO14832 338 aa12.56□□□□□ -0.4
SPG7-210ENST00000564409 CCNB2O95067 398 aa12.56□□□□□ -0.4
SPG7-210ENST00000564409 CYB5R3P00387 301 aaPredicted RBP12.56□□□□□ -0.4
SPG7-210ENST00000564409 PRTN3P24158 256 aa12.56□□□□□ -0.4
SPG7-210ENST00000564409 MTNR1AP48039 350 aa12.56□□□□□ -0.4
SPG7-210ENST00000564409 MZT1Q08AG7 82 aa12.56□□□□□ -0.4
SPG7-210ENST00000564409 FOXL1Q12952 345 aa12.56□□□□□ -0.4
SPG7-210ENST00000564409 PCK2Q16822 640 aa12.56□□□□□ -0.4
SPG7-210ENST00000564409 TEX30Q5JUR7 227 aa12.56□□□□□ -0.4
SPG7-210ENST00000564409 CLEC12AQ5QGZ9 265 aa12.56□□□□□ -0.4
SPG7-210ENST00000564409 ZNF770Q6IQ21 691 aaPredicted RBP12.56□□□□□ -0.4
SPG7-210ENST00000564409 DCDC5Q6ZRR9 648 aa12.56□□□□□ -0.4
SPG7-210ENST00000564409 C9orf139Q6ZV77 190 aa12.56□□□□□ -0.4
SPG7-210ENST00000564409 SPERTQ8NA61 448 aa12.56□□□□□ -0.4
SPG7-210ENST00000564409 SLCO4A1Q96BD0 722 aa12.56□□□□□ -0.4
SPG7-210ENST00000564409 MAP6Q96JE9 813 aa12.56□□□□□ -0.4
SPG7-210ENST00000564409 BTBD10Q9BSF8 475 aa12.56□□□□□ -0.4
SPG7-210ENST00000564409 EGLN3Q9H6Z9 239 aa12.56□□□□□ -0.4
SPG7-210ENST00000564409 WDR76Q9H967 626 aa12.56□□□□□ -0.4
SPG7-210ENST00000564409 ESM1Q9NQ30 184 aa12.56□□□□□ -0.4
SPG7-210ENST00000564409 IGHV2-70DA0A0C4DH43 119 aa12.55□□□□□ -0.4
SPG7-210ENST00000564409 KIR2DS1A0A191URI9 304 aa12.55□□□□□ -0.4
SPG7-210ENST00000564409 CD300LBA8K4G0 201 aa12.55□□□□□ -0.4
SPG7-210ENST00000564409 CLDN34H7C241 214 aa12.55□□□□□ -0.4
SPG7-210ENST00000564409 PTBP3O95758 552 aaKnown RBP12.55□□□□□ -0.4
SPG7-210ENST00000564409 FMO3P31513 532 aa12.55□□□□□ -0.4
SPG7-210ENST00000564409 CD80P33681 288 aa12.55□□□□□ -0.4
SPG7-210ENST00000564409 PITPNBP48739 271 aa12.55□□□□□ -0.4
SPG7-210ENST00000564409 NPY4RP50391 375 aa12.55□□□□□ -0.4
SPG7-210ENST00000564409 SLC25A1P53007 311 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms