RNA–Protein interactions for RNA: ENST00000564353.5

CLK3-215, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 2,847 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-215ENST00000564353 C13orf42A0A1B0GVH6 325 aa11.99□□□□□ -0.49
CLK3-215ENST00000564353 LINC00587B1AMM8 73 aa11.99□□□□□ -0.49
CLK3-215ENST00000564353 SRSF10O75494 262 aaKnown RBP11.99□□□□□ -0.49
CLK3-215ENST00000564353 CAPZA1P52907 286 aa11.99□□□□□ -0.49
CLK3-215ENST00000564353 BAMBIQ13145 260 aa11.99□□□□□ -0.49
CLK3-215ENST00000564353 PPP1R1AQ13522 171 aa11.99□□□□□ -0.49
CLK3-215ENST00000564353 AWAT2Q6E213 333 aa11.99□□□□□ -0.49
CLK3-215ENST00000564353 ELP2Q6IA86 826 aa11.99□□□□□ -0.49
CLK3-215ENST00000564353 OGFOD3Q6PK18 319 aa11.99□□□□□ -0.49
CLK3-215ENST00000564353 ABHD12BQ7Z5M8 362 aaPredicted RBP11.99□□□□□ -0.49
CLK3-215ENST00000564353 ANKRD37Q7Z713 158 aa11.99□□□□□ -0.49
CLK3-215ENST00000564353 ANGPTL5Q86XS5 388 aa11.99□□□□□ -0.49
CLK3-215ENST00000564353 NAXEQ8NCW5 288 aa11.99□□□□□ -0.49
CLK3-215ENST00000564353 SLC39A7Q92504 469 aa11.99□□□□□ -0.49
CLK3-215ENST00000564353 RADILQ96JH8 1075 aa11.99□□□□□ -0.49
CLK3-215ENST00000564353 KCNK17Q96T54 332 aa11.99□□□□□ -0.49
CLK3-215ENST00000564353 REG4Q9BYZ8 158 aa11.99□□□□□ -0.49
CLK3-215ENST00000564353 PBOV1Q9GZY1 135 aa11.99□□□□□ -0.49
CLK3-215ENST00000564353 CST11Q9H112 138 aa11.99□□□□□ -0.49
CLK3-215ENST00000564353 METTL7AQ9H8H3 244 aa11.99□□□□□ -0.49
CLK3-215ENST00000564353 SERINC1Q9NRX5 453 aa11.99□□□□□ -0.49
CLK3-215ENST00000564353 ZNF275Q9NSD4 429 aaPredicted RBP11.99□□□□□ -0.49
CLK3-215ENST00000564353 TMEM200CA6NKL6 621 aa11.99□□□□□ -0.49
CLK3-215ENST00000564353 TO15178 435 aa11.99□□□□□ -0.49
CLK3-215ENST00000564353 BCAT2O15382 392 aaPredicted RBP11.99□□□□□ -0.49
CLK3-215ENST00000564353 ITGB2P05107 769 aa11.99□□□□□ -0.49
CLK3-215ENST00000564353 CD34P28906 385 aa11.99□□□□□ -0.49
CLK3-215ENST00000564353 AKR1C2P52895 323 aa11.99□□□□□ -0.49
CLK3-215ENST00000564353 ATP1B3P54709 279 aa11.99□□□□□ -0.49
CLK3-215ENST00000564353 AKR1C1Q04828 323 aa11.99□□□□□ -0.49
CLK3-215ENST00000564353 FDX2Q6P4F2 183 aa11.99□□□□□ -0.49
CLK3-215ENST00000564353 UTP23Q9BRU9 249 aaKnown RBP11.99□□□□□ -0.49
CLK3-215ENST00000564353 POTEKPQ9BYX7 375 aa11.99□□□□□ -0.49
CLK3-215ENST00000564353 UCK1Q9HA47 277 aa11.99□□□□□ -0.49
CLK3-215ENST00000564353 NUP210LQ5VU65 1888 aa11.98□□□□□ -0.49
CLK3-215ENST00000564353 VSTM2BA6NLU5 285 aa11.98□□□□□ -0.49
CLK3-215ENST00000564353 NUDT21O43809 227 aaKnown RBP11.98□□□□□ -0.49
CLK3-215ENST00000564353 ZNF735P0CB33 412 aa11.98□□□□□ -0.49
CLK3-215ENST00000564353 GIMD1P0DJR0 217 aa11.98□□□□□ -0.49
CLK3-215ENST00000564353 VSIG8P0DPA2 414 aa11.98□□□□□ -0.49
CLK3-215ENST00000564353 GLB1P16278 677 aa11.98□□□□□ -0.49
CLK3-215ENST00000564353 LUMP51884 338 aaPredicted RBP11.98□□□□□ -0.49
CLK3-215ENST00000564353 GK2Q14410 553 aaPredicted RBP11.98□□□□□ -0.49
CLK3-215ENST00000564353 NKAIN1Q4KMZ8 207 aa11.98□□□□□ -0.49
CLK3-215ENST00000564353 RGS7BPQ6MZT1 257 aaPredicted RBP11.98□□□□□ -0.49
CLK3-215ENST00000564353 UNQ6126/PRO20091Q6UXV3 157 aa11.98□□□□□ -0.49
CLK3-215ENST00000564353 TMEM234Q8WY98 164 aa11.98□□□□□ -0.49
CLK3-215ENST00000564353 ROBO4Q8WZ75 1007 aa11.98□□□□□ -0.49
CLK3-215ENST00000564353 MVB12AQ96EY5 273 aa11.98□□□□□ -0.49
CLK3-215ENST00000564353 CHST11Q9NPF2 352 aa11.98□□□□□ -0.49
CLK3-215ENST00000564353 OR5H14A6NHG9 310 aa11.98□□□□□ -0.49
CLK3-215ENST00000564353 RAB27BO00194 218 aa11.98□□□□□ -0.49
CLK3-215ENST00000564353 SCRG1O75711 98 aa11.98□□□□□ -0.49
CLK3-215ENST00000564353 MPIG6BO95866 241 aa11.98□□□□□ -0.49
CLK3-215ENST00000564353 HSD11B1P28845 292 aa11.98□□□□□ -0.49
CLK3-215ENST00000564353 CD96P40200 585 aa11.98□□□□□ -0.49
CLK3-215ENST00000564353 CLRN1P58418 232 aa11.98□□□□□ -0.49
CLK3-215ENST00000564353 SCRN3Q0VDG4 424 aa11.98□□□□□ -0.49
CLK3-215ENST00000564353 RNASE10Q5GAN6 216 aaKnown RBP11.98□□□□□ -0.49
CLK3-215ENST00000564353 KLHL24Q6TFL4 600 aa11.98□□□□□ -0.49
CLK3-215ENST00000564353 TMPPEQ6ZT21 453 aa11.98□□□□□ -0.49
CLK3-215ENST00000564353 CCDC36Q8IYA8 594 aa11.98□□□□□ -0.49
CLK3-215ENST00000564353 ZNF454Q8N9F8 522 aa11.98□□□□□ -0.49
CLK3-215ENST00000564353 OR10K1Q8NGX5 313 aa11.98□□□□□ -0.49
CLK3-215ENST00000564353 MRGPRFQ96AM1 343 aa11.98□□□□□ -0.49
CLK3-215ENST00000564353 JSRP1Q96MG2 331 aaPredicted RBP11.98□□□□□ -0.49
CLK3-215ENST00000564353 OR2AT4A6NND4 320 aa11.97□□□□□ -0.49
CLK3-215ENST00000564353 GLAP06280 429 aa11.97□□□□□ -0.49
CLK3-215ENST00000564353 SELLP14151 372 aa11.97□□□□□ -0.49
CLK3-215ENST00000564353 BDKRB2P30411 391 aa11.97□□□□□ -0.49
CLK3-215ENST00000564353 NUP62P37198 522 aaPredicted RBP11.97□□□□□ -0.49
CLK3-215ENST00000564353 OR3A4PP47883 348 aa11.97□□□□□ -0.49
CLK3-215ENST00000564353 MECP2P51608 486 aaKnown RBP11.97□□□□□ -0.49
CLK3-215ENST00000564353 C17orf67Q0P5P2 114 aa11.97□□□□□ -0.49
CLK3-215ENST00000564353 TMEM81Q6P7N7 255 aa11.97□□□□□ -0.49
CLK3-215ENST00000564353 LIN37Q96GY3 246 aaPredicted RBP11.97□□□□□ -0.49
CLK3-215ENST00000564353 TMEM41AQ96HV5 264 aa11.97□□□□□ -0.49
CLK3-215ENST00000564353 NARS2Q96I59 477 aaKnown RBP11.97□□□□□ -0.49
CLK3-215ENST00000564353 FAM206AQ9NX38 181 aa11.97□□□□□ -0.49
CLK3-215ENST00000564353 B3GAT1Q9P2W7 334 aa11.97□□□□□ -0.49
CLK3-215ENST00000564353 KCNK7Q9Y2U2 307 aa11.97□□□□□ -0.49
CLK3-215ENST00000564353 MFSD2BA6NFX1 497 aa11.97□□□□□ -0.49
CLK3-215ENST00000564353 E9PLN8 166 aa11.97□□□□□ -0.49
CLK3-215ENST00000564353 ZNF41P51814 821 aaPredicted RBP11.97□□□□□ -0.49
CLK3-215ENST00000564353 GMFBP60983 142 aa11.97□□□□□ -0.49
CLK3-215ENST00000564353 TMEM176BQ3YBM2 270 aaPredicted RBP11.97□□□□□ -0.49
CLK3-215ENST00000564353 ATRAIDQ6UW56 229 aa11.97□□□□□ -0.49
CLK3-215ENST00000564353 ZNF813Q6ZN06 617 aa11.97□□□□□ -0.49
CLK3-215ENST00000564353 PRSS42Q7Z5A4 293 aa11.97□□□□□ -0.49
CLK3-215ENST00000564353 OR1S1Q8NH92 325 aa11.97□□□□□ -0.49
CLK3-215ENST00000564353 PPP1R1CQ8WVI7 109 aa11.97□□□□□ -0.49
CLK3-215ENST00000564353 ZBTB8AQ96BR9 441 aa11.97□□□□□ -0.49
CLK3-215ENST00000564353 IFT46Q9NQC8 304 aa11.97□□□□□ -0.49
CLK3-215ENST00000564353 ANKUB1A6NFN9 424 aa11.96□□□□□ -0.49
CLK3-215ENST00000564353 LIPT2A6NK58 231 aa11.96□□□□□ -0.49
CLK3-215ENST00000564353 SOCS1O15524 211 aa11.96□□□□□ -0.49
CLK3-215ENST00000564353 APOC3P02656 99 aa11.96□□□□□ -0.49
CLK3-215ENST00000564353 DAP3P51398 398 aaKnown RBP11.96□□□□□ -0.49
CLK3-215ENST00000564353 EMP2P54851 167 aa11.96□□□□□ -0.49
CLK3-215ENST00000564353 IL13RA1P78552 427 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms