RNA–Protein interactions for RNA: ENST00000563605.1

AC009088.3-201, humanhuman

TSL 3 BASIC

Gene AC009088.3, Length 357 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009088.3-201ENST00000563605 DCAF16Q9NXF7 216 aa13.22□□□□□ -0.29
AC009088.3-201ENST00000563605 WIPI2Q9Y4P8 454 aa13.22□□□□□ -0.29
AC009088.3-201ENST00000563605 ISPDA4D126 451 aa13.21□□□□□ -0.29
AC009088.3-201ENST00000563605 G3V2T6 193 aa13.21□□□□□ -0.29
AC009088.3-201ENST00000563605 H0YL77 283 aa13.21□□□□□ -0.29
AC009088.3-201ENST00000563605 M0R135 149 aa13.21□□□□□ -0.29
AC009088.3-201ENST00000563605 ADH4P08319 380 aa13.21□□□□□ -0.29
AC009088.3-201ENST00000563605 GSTT1P30711 240 aa13.21□□□□□ -0.29
AC009088.3-201ENST00000563605 CDH15P55291 814 aa13.21□□□□□ -0.29
AC009088.3-201ENST00000563605 LMO4P61968 165 aa13.21□□□□□ -0.29
AC009088.3-201ENST00000563605 MALLQ13021 153 aa13.21□□□□□ -0.29
AC009088.3-201ENST00000563605 EIF2B1Q14232 305 aaKnown RBP13.21□□□□□ -0.29
AC009088.3-201ENST00000563605 KPNB1Q14974 876 aaKnown RBP13.21□□□□□ -0.29
AC009088.3-201ENST00000563605 CR1LQ2VPA4 569 aa13.21□□□□□ -0.29
AC009088.3-201ENST00000563605 KRTAP27-1Q3LI81 207 aa13.21□□□□□ -0.29
AC009088.3-201ENST00000563605 KLHL12Q53G59 568 aa13.21□□□□□ -0.29
AC009088.3-201ENST00000563605 AMIGO2Q86SJ2 522 aa13.21□□□□□ -0.29
AC009088.3-201ENST00000563605 OR8G5Q8NG78 346 aa13.21□□□□□ -0.29
AC009088.3-201ENST00000563605 OR10AD1Q8NGE0 317 aa13.21□□□□□ -0.29
AC009088.3-201ENST00000563605 OR6N2Q8NGY6 317 aa13.21□□□□□ -0.29
AC009088.3-201ENST00000563605 ITLN1Q8WWA0 313 aa13.21□□□□□ -0.29
AC009088.3-201ENST00000563605 LRTOMTQ8WZ04 291 aa13.21□□□□□ -0.29
AC009088.3-201ENST00000563605 SLAMF6Q96DU3 332 aa13.21□□□□□ -0.29
AC009088.3-201ENST00000563605 ZNF799Q96GE5 643 aa13.21□□□□□ -0.29
AC009088.3-201ENST00000563605 MALRD1Q5VYJ5 2156 aa13.2□□□□□ -0.3
AC009088.3-201ENST00000563605 C5orf63A6NC05 138 aa13.2□□□□□ -0.3
AC009088.3-201ENST00000563605 PRR23D1E9PI22 279 aaPredicted RBP13.2□□□□□ -0.3
AC009088.3-201ENST00000563605 J3QW42 95 aa13.2□□□□□ -0.3
AC009088.3-201ENST00000563605 HMGN1P05114 100 aa13.2□□□□□ -0.3
AC009088.3-201ENST00000563605 CD55P08174 381 aa13.2□□□□□ -0.3
AC009088.3-201ENST00000563605 SBK2P0C263 348 aa13.2□□□□□ -0.3
AC009088.3-201ENST00000563605 PRR23D2P0DMB1 279 aaPredicted RBP13.2□□□□□ -0.3
AC009088.3-201ENST00000563605 SLC2A1P11166 492 aa13.2□□□□□ -0.3
AC009088.3-201ENST00000563605 BLVRAP53004 296 aa13.2□□□□□ -0.3
AC009088.3-201ENST00000563605 ACTR3P61158 418 aa13.2□□□□□ -0.3
AC009088.3-201ENST00000563605 GK2Q14410 553 aaPredicted RBP13.2□□□□□ -0.3
AC009088.3-201ENST00000563605 LINC01590Q5TEZ4 76 aa13.2□□□□□ -0.3
AC009088.3-201ENST00000563605 FAHD1Q6P587 224 aa13.2□□□□□ -0.3
AC009088.3-201ENST00000563605 COLCA1Q6ZS62 124 aa13.2□□□□□ -0.3
AC009088.3-201ENST00000563605 DPY19L4Q7Z388 723 aa13.2□□□□□ -0.3
AC009088.3-201ENST00000563605 CPOQ8IVL8 374 aa13.2□□□□□ -0.3
AC009088.3-201ENST00000563605 C10orf67Q8IYJ2 551 aa13.2□□□□□ -0.3
AC009088.3-201ENST00000563605 OR13G1Q8NGZ3 307 aa13.2□□□□□ -0.3
AC009088.3-201ENST00000563605 PYDC1Q8WXC3 89 aa13.2□□□□□ -0.3
AC009088.3-201ENST00000563605 ZMYND19Q96E35 227 aaPredicted RBP13.2□□□□□ -0.3
AC009088.3-201ENST00000563605 OR2V2Q96R30 315 aa13.2□□□□□ -0.3
AC009088.3-201ENST00000563605 INTS14Q96SY0 518 aa13.2□□□□□ -0.3
AC009088.3-201ENST00000563605 ZNF665Q9H7R5 613 aa13.2□□□□□ -0.3
AC009088.3-201ENST00000563605 KRT84Q9NSB2 600 aa13.2□□□□□ -0.3
AC009088.3-201ENST00000563605 TMEM160Q9NX00 188 aa13.2□□□□□ -0.3
AC009088.3-201ENST00000563605 UBAP1Q9NZ09 502 aa13.2□□□□□ -0.3
AC009088.3-201ENST00000563605 B4DSR2 109 aa13.19□□□□□ -0.3
AC009088.3-201ENST00000563605 SURF4O15260 269 aa13.19□□□□□ -0.3
AC009088.3-201ENST00000563605 GLCEO94923 617 aa13.19□□□□□ -0.3
AC009088.3-201ENST00000563605 IFNA2P01563 188 aa13.19□□□□□ -0.3
AC009088.3-201ENST00000563605 HLA-DPB1P04440 258 aa13.19□□□□□ -0.3
AC009088.3-201ENST00000563605 TNFRSF1AP19438 455 aa13.19□□□□□ -0.3
AC009088.3-201ENST00000563605 DAPP51397 102 aa13.19□□□□□ -0.3
AC009088.3-201ENST00000563605 RPS7P62081 194 aaKnown RBP13.19□□□□□ -0.3
AC009088.3-201ENST00000563605 CDK5Q00535 292 aa13.19□□□□□ -0.3
AC009088.3-201ENST00000563605 SNAI3Q3KNW1 292 aa13.19□□□□□ -0.3
AC009088.3-201ENST00000563605 TEX30Q5JUR7 227 aa13.19□□□□□ -0.3
AC009088.3-201ENST00000563605 ZFP1Q6P2D0 407 aa13.19□□□□□ -0.3
AC009088.3-201ENST00000563605 PGAP1Q75T13 922 aa13.19□□□□□ -0.3
AC009088.3-201ENST00000563605 MRPL21Q7Z2W9 205 aaKnown RBP13.19□□□□□ -0.3
AC009088.3-201ENST00000563605 PEG10Q86TG7 708 aaKnown RBP13.19□□□□□ -0.3
AC009088.3-201ENST00000563605 ZNF283Q8N7M2 679 aa13.19□□□□□ -0.3
AC009088.3-201ENST00000563605 OR2AE1Q8NHA4 323 aa13.19□□□□□ -0.3
AC009088.3-201ENST00000563605 SPRYD4Q8WW59 207 aaPredicted RBP13.19□□□□□ -0.3
AC009088.3-201ENST00000563605 CENPNQ96H22 339 aaPredicted RBP13.19□□□□□ -0.3
AC009088.3-201ENST00000563605 C1orf159Q96HA4 380 aa13.19□□□□□ -0.3
AC009088.3-201ENST00000563605 GAL3ST1Q99999 423 aa13.19□□□□□ -0.3
AC009088.3-201ENST00000563605 PRRG3Q9BZD7 231 aa13.19□□□□□ -0.3
AC009088.3-201ENST00000563605 SEMA6AQ9H2E6 1030 aa13.19□□□□□ -0.3
AC009088.3-201ENST00000563605 TMEM106BQ9NUM4 274 aa13.19□□□□□ -0.3
AC009088.3-201ENST00000563605 TMEM100Q9NV29 134 aa13.19□□□□□ -0.3
AC009088.3-201ENST00000563605 TVP23BQ9NYZ1 205 aa13.19□□□□□ -0.3
AC009088.3-201ENST00000563605 LPAR3Q9UBY5 353 aa13.19□□□□□ -0.3
AC009088.3-201ENST00000563605 IL19Q9UHD0 177 aa13.19□□□□□ -0.3
AC009088.3-201ENST00000563605 TMEFF2Q9UIK5 374 aaPredicted RBP13.19□□□□□ -0.3
AC009088.3-201ENST00000563605 PPP1R3CQ9UQK1 317 aa13.19□□□□□ -0.3
AC009088.3-201ENST00000563605 F5H5P2 479 aa13.18□□□□□ -0.3
AC009088.3-201ENST00000563605 MITFO75030 526 aaPredicted RBP13.18□□□□□ -0.3
AC009088.3-201ENST00000563605 FAM157CP0CG43 387 aa13.18□□□□□ -0.3
AC009088.3-201ENST00000563605 SELEP16581 610 aa13.18□□□□□ -0.3
AC009088.3-201ENST00000563605 SRD5A1P18405 259 aa13.18□□□□□ -0.3
AC009088.3-201ENST00000563605 HNF1AP20823 631 aa13.18□□□□□ -0.3
AC009088.3-201ENST00000563605 ANOS1P23352 680 aa13.18□□□□□ -0.3
AC009088.3-201ENST00000563605 CRISP1P54107 249 aa13.18□□□□□ -0.3
AC009088.3-201ENST00000563605 SLC3A1Q07837 685 aa13.18□□□□□ -0.3
AC009088.3-201ENST00000563605 SNAPC1Q16533 368 aa13.18□□□□□ -0.3
AC009088.3-201ENST00000563605 PCK2Q16822 640 aa13.18□□□□□ -0.3
AC009088.3-201ENST00000563605 GLCCI1Q86VQ1 547 aa13.18□□□□□ -0.3
AC009088.3-201ENST00000563605 PARP8Q8N3A8 854 aa13.18□□□□□ -0.3
AC009088.3-201ENST00000563605 BBS1Q8NFJ9 593 aa13.18□□□□□ -0.3
AC009088.3-201ENST00000563605 ST7LQ8TDW4 575 aa13.18□□□□□ -0.3
AC009088.3-201ENST00000563605 KCNJ15Q99712 375 aa13.18□□□□□ -0.3
AC009088.3-201ENST00000563605 ABHD6Q9BV23 337 aa13.18□□□□□ -0.3
AC009088.3-201ENST00000563605 GABARAPL1Q9H0R8 117 aa13.18□□□□□ -0.3
AC009088.3-201ENST00000563605 SLC25A19Q9HC21 320 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms