RNA–Protein interactions for RNA: ENST00000563218.5

SPG7-207, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-207ENST00000563218 NOX3Q9HBY0 568 aa11.48□□□□□ -0.57
SPG7-207ENST00000563218 CLEC2DQ9UHP7 191 aa11.48□□□□□ -0.57
SPG7-207ENST00000563218 IGLV1-36A0A0B4J1U3 117 aa11.47□□□□□ -0.57
SPG7-207ENST00000563218 CCDC160A6NGH7 325 aa11.47□□□□□ -0.57
SPG7-207ENST00000563218 J3QRE1 110 aa11.47□□□□□ -0.57
SPG7-207ENST00000563218 TCF21O43680 179 aa11.47□□□□□ -0.57
SPG7-207ENST00000563218 SELENOFO60613 162 aa11.47□□□□□ -0.57
SPG7-207ENST00000563218 KHDRBS3O75525 346 aaKnown RBP11.47□□□□□ -0.57
SPG7-207ENST00000563218 ZNF432O94892 652 aa11.47□□□□□ -0.57
SPG7-207ENST00000563218 HLA-DQA2P01906 255 aa11.47□□□□□ -0.57
SPG7-207ENST00000563218 OR2T7P0C7T2 308 aa11.47□□□□□ -0.57
SPG7-207ENST00000563218 PGA4P0DJD7 388 aa11.47□□□□□ -0.57
SPG7-207ENST00000563218 PGA3P0DJD8 388 aa11.47□□□□□ -0.57
SPG7-207ENST00000563218 NAA10P41227 235 aaPredicted RBP11.47□□□□□ -0.57
SPG7-207ENST00000563218 GP2P55259 537 aaKnown RBP11.47□□□□□ -0.57
SPG7-207ENST00000563218 RIN1Q13671 783 aa11.47□□□□□ -0.57
SPG7-207ENST00000563218 SPHARQ15513 63 aa11.47□□□□□ -0.57
SPG7-207ENST00000563218 TIGD6Q17RP2 521 aa11.47□□□□□ -0.57
SPG7-207ENST00000563218 THEM4Q5T1C6 240 aa11.47□□□□□ -0.57
SPG7-207ENST00000563218 CARD17Q5XLA6 110 aa11.47□□□□□ -0.57
SPG7-207ENST00000563218 SLC16A9Q7RTY1 509 aa11.47□□□□□ -0.57
SPG7-207ENST00000563218 LHFPL3Q86UP9 236 aa11.47□□□□□ -0.57
SPG7-207ENST00000563218 MDP1Q86V88 176 aa11.47□□□□□ -0.57
SPG7-207ENST00000563218 SLC35F2Q8IXU6 374 aa11.47□□□□□ -0.57
SPG7-207ENST00000563218 KLHL36Q8N4N3 616 aa11.47□□□□□ -0.57
SPG7-207ENST00000563218 RFLNBQ8N5W9 214 aa11.47□□□□□ -0.57
SPG7-207ENST00000563218 OR13F1Q8NGS4 319 aa11.47□□□□□ -0.57
SPG7-207ENST00000563218 OR2T27Q8NH04 317 aa11.47□□□□□ -0.57
SPG7-207ENST00000563218 MRPL48Q96GC5 212 aaKnown RBP11.47□□□□□ -0.57
SPG7-207ENST00000563218 TBX5Q99593 518 aa11.47□□□□□ -0.57
SPG7-207ENST00000563218 MRPL13Q9BYD1 178 aaKnown RBP11.47□□□□□ -0.57
SPG7-207ENST00000563218 RAB1BQ9H0U4 201 aa11.47□□□□□ -0.57
SPG7-207ENST00000563218 ERVK13-1Q9NX77 482 aa11.47□□□□□ -0.57
SPG7-207ENST00000563218 OR6C65A6NJZ3 312 aa11.46□□□□□ -0.57
SPG7-207ENST00000563218 VENTXO95231 258 aa11.46□□□□□ -0.57
SPG7-207ENST00000563218 LIMS3P0CW19 117 aa11.46□□□□□ -0.57
SPG7-207ENST00000563218 LIMS4P0CW20 117 aa11.46□□□□□ -0.57
SPG7-207ENST00000563218 HSMCR30P0CW71 290 aa11.46□□□□□ -0.57
SPG7-207ENST00000563218 CTLA4P16410 223 aa11.46□□□□□ -0.57
SPG7-207ENST00000563218 NPR2P20594 1047 aa11.46□□□□□ -0.57
SPG7-207ENST00000563218 SRP14P37108 136 aaKnown RBP11.46□□□□□ -0.57
SPG7-207ENST00000563218 CSNK1A1P48729 337 aa11.46□□□□□ -0.57
SPG7-207ENST00000563218 WNT4P56705 351 aa11.46□□□□□ -0.57
SPG7-207ENST00000563218 GLO1Q04760 184 aa11.46□□□□□ -0.57
SPG7-207ENST00000563218 FMODQ06828 376 aa11.46□□□□□ -0.57
SPG7-207ENST00000563218 SNTB2Q13425 540 aaKnown RBP11.46□□□□□ -0.57
SPG7-207ENST00000563218 GALEQ14376 348 aa11.46□□□□□ -0.57
SPG7-207ENST00000563218 C3orf36Q3SXR2 165 aa11.46□□□□□ -0.57
SPG7-207ENST00000563218 C1QTNF12Q5T7M4 302 aa11.46□□□□□ -0.57
SPG7-207ENST00000563218 LIPNQ5VXI9 398 aa11.46□□□□□ -0.57
SPG7-207ENST00000563218 TMPRSS11AQ6ZMR5 421 aa11.46□□□□□ -0.57
SPG7-207ENST00000563218 CLVS1Q8IUQ0 354 aaPredicted RBP11.46□□□□□ -0.57
SPG7-207ENST00000563218 ERI1Q8IV48 349 aaKnown RBP11.46□□□□□ -0.57
SPG7-207ENST00000563218 LINC01356Q8N9X3 169 aa11.46□□□□□ -0.57
SPG7-207ENST00000563218 ZNF511Q8NB15 262 aa11.46□□□□□ -0.57
SPG7-207ENST00000563218 OR6N1Q8NGY5 312 aa11.46□□□□□ -0.57
SPG7-207ENST00000563218 OR52N1Q8NH53 320 aa11.46□□□□□ -0.57
SPG7-207ENST00000563218 MS4A3Q96HJ5 214 aa11.46□□□□□ -0.57
SPG7-207ENST00000563218 COG8Q96MW5 612 aa11.46□□□□□ -0.57
SPG7-207ENST00000563218 OR2M2Q96R28 347 aa11.46□□□□□ -0.57
SPG7-207ENST00000563218 OR5M11Q96RB7 305 aa11.46□□□□□ -0.57
SPG7-207ENST00000563218 INTS14Q96SY0 518 aa11.46□□□□□ -0.57
SPG7-207ENST00000563218 MYCBPQ99417 103 aaPredicted RBP11.46□□□□□ -0.57
SPG7-207ENST00000563218 MNTQ99583 582 aa11.46□□□□□ -0.57
SPG7-207ENST00000563218 ALG8Q9BVK2 526 aa11.46□□□□□ -0.57
SPG7-207ENST00000563218 LINC00470Q9BZP3 86 aa11.46□□□□□ -0.57
SPG7-207ENST00000563218 NARFLQ9H6Q4 476 aa11.46□□□□□ -0.57
SPG7-207ENST00000563218 ZNF442Q9H7R0 627 aa11.46□□□□□ -0.57
SPG7-207ENST00000563218 GPR35Q9HC97 309 aa11.46□□□□□ -0.57
SPG7-207ENST00000563218 RCE1Q9Y256 329 aa11.46□□□□□ -0.57
SPG7-207ENST00000563218 COA3Q9Y2R0 106 aaPredicted RBP11.46□□□□□ -0.57
SPG7-207ENST00000563218 LSM2Q9Y333 95 aaKnown RBP11.46□□□□□ -0.57
SPG7-207ENST00000563218 CAB39Q9Y376 341 aaPredicted RBP11.46□□□□□ -0.57
SPG7-207ENST00000563218 TANC2Q9HCD6 1990 aa11.46□□□□□ -0.58
SPG7-207ENST00000563218 WNK2Q9Y3S1 2297 aa11.46□□□□□ -0.58
SPG7-207ENST00000563218 TVP23AA6NH52 213 aa11.45□□□□□ -0.58
SPG7-207ENST00000563218 ZNF670-ZNF695F2Z2N8 137 aa11.45□□□□□ -0.58
SPG7-207ENST00000563218 H3BSA7 217 aa11.45□□□□□ -0.58
SPG7-207ENST00000563218 WNT9BO14905 357 aa11.45□□□□□ -0.58
SPG7-207ENST00000563218 NOL3O60936 208 aaKnown RBP11.45□□□□□ -0.58
SPG7-207ENST00000563218 SLC43A1O75387 559 aa11.45□□□□□ -0.58
SPG7-207ENST00000563218 RGS9O75916 674 aaPredicted RBP11.45□□□□□ -0.58
SPG7-207ENST00000563218 TFP02787 698 aa11.45□□□□□ -0.58
SPG7-207ENST00000563218 CBR1P16152 277 aa11.45□□□□□ -0.58
SPG7-207ENST00000563218 HSF2Q03933 536 aa11.45□□□□□ -0.58
SPG7-207ENST00000563218 CEACAM16Q2WEN9 425 aa11.45□□□□□ -0.58
SPG7-207ENST00000563218 ARMCX4Q5H9R4 360 aa11.45□□□□□ -0.58
SPG7-207ENST00000563218 GPR107Q5VW38 600 aa11.45□□□□□ -0.58
SPG7-207ENST00000563218 LYPD4Q6UWN0 246 aa11.45□□□□□ -0.58
SPG7-207ENST00000563218 TIGD4Q8IY51 512 aa11.45□□□□□ -0.58
SPG7-207ENST00000563218 SEMA6DQ8NFY4 1073 aa11.45□□□□□ -0.58
SPG7-207ENST00000563218 OR6N2Q8NGY6 317 aa11.45□□□□□ -0.58
SPG7-207ENST00000563218 UBASH3BQ8TF42 649 aa11.45□□□□□ -0.58
SPG7-207ENST00000563218 NEU4Q8WWR8 484 aaPredicted RBP11.45□□□□□ -0.58
SPG7-207ENST00000563218 NSMAFQ92636 917 aa11.45□□□□□ -0.58
SPG7-207ENST00000563218 TMEM54Q969K7 222 aa11.45□□□□□ -0.58
SPG7-207ENST00000563218 MGLLQ99685 303 aa11.45□□□□□ -0.58
SPG7-207ENST00000563218 MRPL37Q9BZE1 423 aaKnown RBP11.45□□□□□ -0.58
SPG7-207ENST00000563218 YIPF3Q9GZM5 350 aa11.45□□□□□ -0.58
SPG7-207ENST00000563218 MARCH7Q9H992 704 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms