RNA–Protein interactions for RNA: ENST00000563112.1

CLK3-210, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-210ENST00000563112 RIIAD1A6NNX1 92 aa14.2□□□□□ -0.14
CLK3-210ENST00000563112 M0R135 149 aa14.2□□□□□ -0.14
CLK3-210ENST00000563112 GNGT2O14610 69 aa14.2□□□□□ -0.14
CLK3-210ENST00000563112 SOX14O95416 240 aa14.2□□□□□ -0.14
CLK3-210ENST00000563112 MDH2P40926 338 aaKnown RBP14.2□□□□□ -0.14
CLK3-210ENST00000563112 SLC25A1P53007 311 aa14.2□□□□□ -0.14
CLK3-210ENST00000563112 LCN2P80188 198 aa14.2□□□□□ -0.14
CLK3-210ENST00000563112 CRMP1Q14194 572 aa14.2□□□□□ -0.14
CLK3-210ENST00000563112 GK2Q14410 553 aaPredicted RBP14.2□□□□□ -0.14
CLK3-210ENST00000563112 ZNF362Q5T0B9 420 aaPredicted RBP14.2□□□□□ -0.14
CLK3-210ENST00000563112 PGAP1Q75T13 922 aa14.2□□□□□ -0.14
CLK3-210ENST00000563112 MRPL21Q7Z2W9 205 aaKnown RBP14.2□□□□□ -0.14
CLK3-210ENST00000563112 MUC20Q8N307 709 aaPredicted RBP14.2□□□□□ -0.14
CLK3-210ENST00000563112 TEX47Q8TBZ9 253 aa14.2□□□□□ -0.14
CLK3-210ENST00000563112 ZNF418Q8TF45 676 aaPredicted RBP14.2□□□□□ -0.14
CLK3-210ENST00000563112 SPRYD4Q8WW59 207 aaPredicted RBP14.2□□□□□ -0.14
CLK3-210ENST00000563112 SLCO4A1Q96BD0 722 aa14.2□□□□□ -0.14
CLK3-210ENST00000563112 ZNF799Q96GE5 643 aa14.2□□□□□ -0.14
CLK3-210ENST00000563112 CLPTM1LQ96KA5 538 aa14.2□□□□□ -0.14
CLK3-210ENST00000563112 RBM4Q9BWF3 364 aaKnown RBP14.2□□□□□ -0.14
CLK3-210ENST00000563112 CHID1Q9BWS9 393 aa14.2□□□□□ -0.14
CLK3-210ENST00000563112 C7orf69Q9H7B7 122 aa14.2□□□□□ -0.14
CLK3-210ENST00000563112 PATZ1Q9HBE1 687 aaKnown RBP14.2□□□□□ -0.14
CLK3-210ENST00000563112 GCM1Q9NP62 436 aa14.2□□□□□ -0.14
CLK3-210ENST00000563112 PNRC2Q9NPJ4 139 aaKnown RBP14.2□□□□□ -0.14
CLK3-210ENST00000563112 ARMC1Q9NVT9 282 aa14.2□□□□□ -0.14
CLK3-210ENST00000563112 LOC105371242A0A075B767 164 aa14.19□□□□□ -0.14
CLK3-210ENST00000563112 AQP12BA6NM10 295 aa14.19□□□□□ -0.14
CLK3-210ENST00000563112 TMEM178BH3BS89 294 aa14.19□□□□□ -0.14
CLK3-210ENST00000563112 ACOT8O14734 319 aa14.19□□□□□ -0.14
CLK3-210ENST00000563112 SPARCP09486 303 aa14.19□□□□□ -0.14
CLK3-210ENST00000563112 ZNF3P17036 446 aa14.19□□□□□ -0.14
CLK3-210ENST00000563112 ENTPD1P49961 510 aa14.19□□□□□ -0.14
CLK3-210ENST00000563112 MMP16P51512 607 aa14.19□□□□□ -0.14
CLK3-210ENST00000563112 ZMYND11Q15326 602 aa14.19□□□□□ -0.14
CLK3-210ENST00000563112 CD300LDQ6UXZ3 194 aa14.19□□□□□ -0.14
CLK3-210ENST00000563112 TRPM8Q7Z2W7 1104 aa14.19□□□□□ -0.14
CLK3-210ENST00000563112 DCXRQ7Z4W1 244 aa14.19□□□□□ -0.14
CLK3-210ENST00000563112 NAA40Q86UY6 237 aa14.19□□□□□ -0.14
CLK3-210ENST00000563112 AQP12AQ8IXF9 295 aa14.19□□□□□ -0.14
CLK3-210ENST00000563112 OR4Q3Q8NH05 313 aa14.19□□□□□ -0.14
CLK3-210ENST00000563112 NANPQ8TBE9 248 aa14.19□□□□□ -0.14
CLK3-210ENST00000563112 COPS4Q9BT78 406 aa14.19□□□□□ -0.14
CLK3-210ENST00000563112 TMPRSS13Q9BYE2 586 aa14.19□□□□□ -0.14
CLK3-210ENST00000563112 DDX28Q9NUL7 540 aaKnown RBP14.19□□□□□ -0.14
CLK3-210ENST00000563112 NOP16Q9Y3C1 178 aaKnown RBP14.19□□□□□ -0.14
CLK3-210ENST00000563112 COMMD3-BMI1R4GMX3 469 aa14.19□□□□□ -0.14
CLK3-210ENST00000563112 PPIAL4EA0A075B759 164 aa14.18□□□□□ -0.14
CLK3-210ENST00000563112 PPIAL4CA0A0B4J2A2 164 aa14.18□□□□□ -0.14
CLK3-210ENST00000563112 DHRS12A0PJE2 317 aa14.18□□□□□ -0.14
CLK3-210ENST00000563112 PPIAL4DF5H284 164 aa14.18□□□□□ -0.14
CLK3-210ENST00000563112 F5H5P2 479 aa14.18□□□□□ -0.14
CLK3-210ENST00000563112 H0YL77 283 aa14.18□□□□□ -0.14
CLK3-210ENST00000563112 H3BN98 237 aa14.18□□□□□ -0.14
CLK3-210ENST00000563112 ZNF593O00488 134 aaPredicted RBP14.18□□□□□ -0.14
CLK3-210ENST00000563112 GYG2O15488 501 aa14.18□□□□□ -0.14
CLK3-210ENST00000563112 MLNRO43193 412 aa14.18□□□□□ -0.14
CLK3-210ENST00000563112 GYPBP06028 91 aa14.18□□□□□ -0.14
CLK3-210ENST00000563112 PPIAL4FP0DN26 164 aa14.18□□□□□ -0.14
CLK3-210ENST00000563112 SPI1P17947 270 aa14.18□□□□□ -0.14
CLK3-210ENST00000563112 EPHA1P21709 976 aa14.18□□□□□ -0.14
CLK3-210ENST00000563112 RPS27P42677 84 aaKnown RBP14.18□□□□□ -0.14
CLK3-210ENST00000563112 RAD23AP54725 363 aa14.18□□□□□ -0.14
CLK3-210ENST00000563112 DNAL1Q4LDG9 190 aa14.18□□□□□ -0.14
CLK3-210ENST00000563112 DRAM2Q6UX65 266 aa14.18□□□□□ -0.14
CLK3-210ENST00000563112 C1QL2Q7Z5L3 287 aa14.18□□□□□ -0.14
CLK3-210ENST00000563112 MOGAT3Q86VF5 341 aa14.18□□□□□ -0.14
CLK3-210ENST00000563112 ADGRG5Q8IZF4 528 aa14.18□□□□□ -0.14
CLK3-210ENST00000563112 C1orf87Q8N0U7 546 aa14.18□□□□□ -0.14
CLK3-210ENST00000563112 ZNF511Q8NB15 262 aa14.18□□□□□ -0.14
CLK3-210ENST00000563112 OR10S1Q8NGN2 331 aa14.18□□□□□ -0.14
CLK3-210ENST00000563112 OR6K6Q8NGW6 343 aa14.18□□□□□ -0.14
CLK3-210ENST00000563112 ZNF420Q8TAQ5 688 aaPredicted RBP14.18□□□□□ -0.14
CLK3-210ENST00000563112 ZNRF4Q8WWF5 429 aa14.18□□□□□ -0.14
CLK3-210ENST00000563112 SLAMF6Q96DU3 332 aa14.18□□□□□ -0.14
CLK3-210ENST00000563112 SIGLEC11Q96RL6 698 aa14.18□□□□□ -0.14
CLK3-210ENST00000563112 FEVQ99581 238 aa14.18□□□□□ -0.14
CLK3-210ENST00000563112 NMNAT2Q9BZQ4 307 aa14.18□□□□□ -0.14
CLK3-210ENST00000563112 SLC22A4Q9H015 551 aa14.18□□□□□ -0.14
CLK3-210ENST00000563112 YY1AP1Q9H869 796 aa14.18□□□□□ -0.14
CLK3-210ENST00000563112 CENPMQ9NSP4 180 aa14.18□□□□□ -0.14
CLK3-210ENST00000563112 ARRDC5A6NEK1 342 aa14.17□□□□□ -0.14
CLK3-210ENST00000563112 AVPP01185 164 aa14.17□□□□□ -0.14
CLK3-210ENST00000563112 HLA-DPB1P04440 258 aa14.17□□□□□ -0.14
CLK3-210ENST00000563112 IRF2P14316 349 aa14.17□□□□□ -0.14
CLK3-210ENST00000563112 CPT2P23786 658 aa14.17□□□□□ -0.14
CLK3-210ENST00000563112 GRK5P34947 590 aa14.17□□□□□ -0.14
CLK3-210ENST00000563112 SLC15A1P46059 708 aa14.17□□□□□ -0.14
CLK3-210ENST00000563112 HNRNPA0Q13151 305 aaKnown RBP14.17□□□□□ -0.14
CLK3-210ENST00000563112 ZNF181Q2M3W8 571 aa14.17□□□□□ -0.14
CLK3-210ENST00000563112 ESCO2Q56NI9 601 aa14.17□□□□□ -0.14
CLK3-210ENST00000563112 TEX30Q5JUR7 227 aa14.17□□□□□ -0.14
CLK3-210ENST00000563112 LYPD4Q6UWN0 246 aa14.17□□□□□ -0.14
CLK3-210ENST00000563112 C1orf229Q6ZS94 237 aaPredicted RBP14.17□□□□□ -0.14
CLK3-210ENST00000563112 CELF2-AS1Q8N7Q2 184 aa14.17□□□□□ -0.14
CLK3-210ENST00000563112 OR11L1Q8NGX0 322 aa14.17□□□□□ -0.14
CLK3-210ENST00000563112 BCAS4Q8TDM0 211 aa14.17□□□□□ -0.14
CLK3-210ENST00000563112 CANT1Q8WVQ1 401 aa14.17□□□□□ -0.14
CLK3-210ENST00000563112 ERGIC1Q969X5 290 aa14.17□□□□□ -0.14
CLK3-210ENST00000563112 OTULINQ96BN8 352 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms