RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 GK2Q14410 553 aaPredicted RBP10.82□□□□□ -0.68
SF3B3-202ENST00000562722 KRT72Q14CN4 511 aa10.82□□□□□ -0.68
SF3B3-202ENST00000562722 OR8G1Q15617 311 aa10.82□□□□□ -0.68
SF3B3-202ENST00000562722 SLC36A3Q495N2 470 aa10.82□□□□□ -0.68
SF3B3-202ENST00000562722 ZNF362Q5T0B9 420 aaPredicted RBP10.82□□□□□ -0.68
SF3B3-202ENST00000562722 CGB2Q6NT52 195 aa10.82□□□□□ -0.68
SF3B3-202ENST00000562722 BRICD5Q6PL45 260 aa10.82□□□□□ -0.68
SF3B3-202ENST00000562722 SMARCD3Q6STE5 483 aa10.82□□□□□ -0.68
SF3B3-202ENST00000562722 MRPL21Q7Z2W9 205 aaKnown RBP10.82□□□□□ -0.68
SF3B3-202ENST00000562722 OR2AJ1Q8NGZ0 328 aa10.82□□□□□ -0.68
SF3B3-202ENST00000562722 OR52J3Q8NH60 311 aa10.82□□□□□ -0.68
SF3B3-202ENST00000562722 FANK1Q8TC84 345 aa10.82□□□□□ -0.68
SF3B3-202ENST00000562722 DACT3Q96B18 629 aaPredicted RBP10.82□□□□□ -0.68
SF3B3-202ENST00000562722 SLCO4A1Q96BD0 722 aa10.82□□□□□ -0.68
SF3B3-202ENST00000562722 CCT8L2Q96SF2 557 aa10.82□□□□□ -0.68
SF3B3-202ENST00000562722 ATF6BQ99941 703 aa10.82□□□□□ -0.68
SF3B3-202ENST00000562722 HOPXQ9BPY8 73 aaPredicted RBP10.82□□□□□ -0.68
SF3B3-202ENST00000562722 KCTD14Q9BQ13 255 aaPredicted RBP10.82□□□□□ -0.68
SF3B3-202ENST00000562722 NOX4Q9NPH5 578 aa10.82□□□□□ -0.68
SF3B3-202ENST00000562722 B9D1Q9UPM9 204 aa10.82□□□□□ -0.68
SF3B3-202ENST00000562722 MMP24Q9Y5R2 645 aa10.82□□□□□ -0.68
SF3B3-202ENST00000562722 IGLV1-36A0A0B4J1U3 117 aa10.81□□□□□ -0.68
SF3B3-202ENST00000562722 TRBV4-1A0A0J9YWV2 114 aa10.81□□□□□ -0.68
SF3B3-202ENST00000562722 C22orf46C9J442 243 aa10.81□□□□□ -0.68
SF3B3-202ENST00000562722 DCTN6O00399 190 aa10.81□□□□□ -0.68
SF3B3-202ENST00000562722 DIRAS1O95057 198 aa10.81□□□□□ -0.68
SF3B3-202ENST00000562722 FSTL3O95633 263 aa10.81□□□□□ -0.68
SF3B3-202ENST00000562722 TXNDC12O95881 172 aa10.81□□□□□ -0.68
SF3B3-202ENST00000562722 SFTPBP07988 381 aa10.81□□□□□ -0.68
SF3B3-202ENST00000562722 ACSM4P0C7M7 580 aa10.81□□□□□ -0.68
SF3B3-202ENST00000562722 COX4I1P13073 169 aa10.81□□□□□ -0.68
SF3B3-202ENST00000562722 RHCEP18577 417 aa10.81□□□□□ -0.68
SF3B3-202ENST00000562722 NOS3P29474 1203 aa10.81□□□□□ -0.68
SF3B3-202ENST00000562722 MDH1P40925 334 aaKnown RBP10.81□□□□□ -0.68
SF3B3-202ENST00000562722 GATA4P43694 442 aa10.81□□□□□ -0.68
SF3B3-202ENST00000562722 BPIFB3P59826 476 aa10.81□□□□□ -0.68
SF3B3-202ENST00000562722 HIST1H3AP68431 136 aa10.81□□□□□ -0.68
SF3B3-202ENST00000562722 SRSF4Q08170 494 aaKnown RBP10.81□□□□□ -0.68
SF3B3-202ENST00000562722 COX10Q12887 443 aa10.81□□□□□ -0.68
SF3B3-202ENST00000562722 ECH1Q13011 328 aa10.81□□□□□ -0.68
SF3B3-202ENST00000562722 MAB21L1Q13394 359 aa10.81□□□□□ -0.68
SF3B3-202ENST00000562722 OR8B8Q15620 311 aa10.81□□□□□ -0.68
SF3B3-202ENST00000562722 KCNJ8Q15842 424 aa10.81□□□□□ -0.68
SF3B3-202ENST00000562722 HIST2H3PS2Q5TEC6 136 aa10.81□□□□□ -0.68
SF3B3-202ENST00000562722 CD276Q5ZPR3 534 aa10.81□□□□□ -0.68
SF3B3-202ENST00000562722 SFRP4Q6FHJ7 346 aaPredicted RBP10.81□□□□□ -0.68
SF3B3-202ENST00000562722 SLC18B1Q6NT16 456 aa10.81□□□□□ -0.68
SF3B3-202ENST00000562722 CFAP77Q6ZQR2 320 aa10.81□□□□□ -0.68
SF3B3-202ENST00000562722 HIST2H3AQ71DI3 136 aa10.81□□□□□ -0.68
SF3B3-202ENST00000562722 PGAP1Q75T13 922 aa10.81□□□□□ -0.68
SF3B3-202ENST00000562722 CELF2-AS1Q8N7Q2 184 aa10.81□□□□□ -0.68
SF3B3-202ENST00000562722 Q8TCH9 128 aa10.81□□□□□ -0.68
SF3B3-202ENST00000562722 WFDC12Q8WWY7 111 aa10.81□□□□□ -0.68
SF3B3-202ENST00000562722 ERGIC1Q969X5 290 aa10.81□□□□□ -0.68
SF3B3-202ENST00000562722 NMNAT3Q96T66 252 aa10.81□□□□□ -0.68
SF3B3-202ENST00000562722 IFT27Q9BW83 186 aa10.81□□□□□ -0.68
SF3B3-202ENST00000562722 CHIAQ9BZP6 476 aa10.81□□□□□ -0.68
SF3B3-202ENST00000562722 NSRP1Q9H0G5 558 aaKnown RBP10.81□□□□□ -0.68
SF3B3-202ENST00000562722 FN3KRPQ9HA64 309 aa10.81□□□□□ -0.68
SF3B3-202ENST00000562722 RPRD1BQ9NQG5 326 aaKnown RBP10.81□□□□□ -0.68
SF3B3-202ENST00000562722 NDUFAF4Q9P032 175 aa10.81□□□□□ -0.68
SF3B3-202ENST00000562722 ERVK-18Q9QC07 812 aa10.81□□□□□ -0.68
SF3B3-202ENST00000562722 NOP16Q9Y3C1 178 aaKnown RBP10.81□□□□□ -0.68
SF3B3-202ENST00000562722 C3orf80F5H4A9 247 aa10.8□□□□□ -0.68
SF3B3-202ENST00000562722 P2RY10O00398 339 aa10.8□□□□□ -0.68
SF3B3-202ENST00000562722 NDUFAB1O14561 156 aa10.8□□□□□ -0.68
SF3B3-202ENST00000562722 GMNNO75496 209 aa10.8□□□□□ -0.68
SF3B3-202ENST00000562722 TOX4O94842 621 aa10.8□□□□□ -0.68
SF3B3-202ENST00000562722 CA6P23280 308 aa10.8□□□□□ -0.68
SF3B3-202ENST00000562722 SLC6A6P31641 620 aa10.8□□□□□ -0.68
SF3B3-202ENST00000562722 GGT2P36268 569 aa10.8□□□□□ -0.68
SF3B3-202ENST00000562722 CFHR2P36980 270 aa10.8□□□□□ -0.68
SF3B3-202ENST00000562722 CD200P41217 278 aa10.8□□□□□ -0.68
SF3B3-202ENST00000562722 NPY4RP50391 375 aa10.8□□□□□ -0.68
SF3B3-202ENST00000562722 NUDT2P50583 147 aa10.8□□□□□ -0.68
SF3B3-202ENST00000562722 TPTEP56180 551 aa10.8□□□□□ -0.68
SF3B3-202ENST00000562722 FXYD6P3P58550 94 aa10.8□□□□□ -0.68
SF3B3-202ENST00000562722 HOXA4Q00056 320 aaPredicted RBP10.8□□□□□ -0.68
SF3B3-202ENST00000562722 DBPQ10586 325 aaPredicted RBP10.8□□□□□ -0.68
SF3B3-202ENST00000562722 TRAP1Q12931 704 aaKnown RBP10.8□□□□□ -0.68
SF3B3-202ENST00000562722 SEC23BQ15437 767 aa10.8□□□□□ -0.68
SF3B3-202ENST00000562722 MPPED2Q15777 294 aa10.8□□□□□ -0.68
SF3B3-202ENST00000562722 CLEC12AQ5QGZ9 265 aa10.8□□□□□ -0.68
SF3B3-202ENST00000562722 METTL11BQ5VVY1 283 aa10.8□□□□□ -0.68
SF3B3-202ENST00000562722 OLFML2AQ68BL7 652 aa10.8□□□□□ -0.68
SF3B3-202ENST00000562722 Q6YL49 198 aa10.8□□□□□ -0.68
SF3B3-202ENST00000562722 COLCA1Q6ZS62 124 aa10.8□□□□□ -0.68
SF3B3-202ENST00000562722 TSEN54Q7Z6J9 526 aaKnown RBP10.8□□□□□ -0.68
SF3B3-202ENST00000562722 OR6V1Q8N148 313 aa10.8□□□□□ -0.68
SF3B3-202ENST00000562722 SLC26A10Q8NG04 563 aa10.8□□□□□ -0.68
SF3B3-202ENST00000562722 OR4K13Q8NH42 304 aa10.8□□□□□ -0.68
SF3B3-202ENST00000562722 GATAD2BQ8WXI9 593 aa10.8□□□□□ -0.68
SF3B3-202ENST00000562722 ADAT1Q9BUB4 502 aaKnown RBP10.8□□□□□ -0.68
SF3B3-202ENST00000562722 EFCAB1Q9HAE3 211 aa10.8□□□□□ -0.68
SF3B3-202ENST00000562722 RNF7Q9UBF6 113 aa10.8□□□□□ -0.68
SF3B3-202ENST00000562722 V9GYQ6 96 aa10.8□□□□□ -0.68
SF3B3-202ENST00000562722 PKD1L1Q8TDX9 2849 aa10.79□□□□□ -0.68
SF3B3-202ENST00000562722 GGT3PA6NGU5 568 aa10.79□□□□□ -0.68
SF3B3-202ENST00000562722 ZNF879B4DU55 563 aa10.79□□□□□ -0.68
SF3B3-202ENST00000562722 M0QZ24 198 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms