RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 TRPC5OSA6NMA1 111 aa1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 SERPINE3A8MV23 424 aa1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 DCTN6O00399 190 aa1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 TAPBPO15533 448 aa1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 TNFSF13O75888 250 aa1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 H6PDO95479 791 aa1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 OCMP0CE72 109 aaPredicted RBP1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 SMIM10L2AP0DMW4 78 aa1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 SMIM10L2BP0DMW5 78 aa1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 COX5AP20674 150 aa1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 GSTM3P21266 225 aa1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 CXCR2P25025 360 aa1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 GTF2E2P29084 291 aaKnown RBP1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 OTX1P32242 354 aaPredicted RBP1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 FDFT1P37268 417 aa1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 ARRB1P49407 418 aaPredicted RBP1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 CCNG1P51959 295 aa1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 CRYBB1P53674 252 aaPredicted RBP1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 CLDN8P56748 225 aa1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 RAB11AP62491 216 aa1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 ACTA1P68133 377 aa1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 SP4Q02446 784 aa1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 MGAT3Q09327 533 aa1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 XRCC4Q13426 336 aa1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 GANABQ14697 944 aaKnown RBP1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 TGFBIQ15582 683 aa1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 RAB11BQ15907 218 aa1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 SNCBQ16143 134 aa1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 PARP15Q460N3 678 aa1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 CTSL3PQ5NE16 218 aa1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 SAMD4BQ5PRF9 694 aaKnown RBP1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 MARCH8Q5T0T0 291 aa1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 GPRC6AQ5T6X5 926 aa1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 LRRC66Q68CR7 880 aa1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 TMEM53Q6P2H8 277 aa1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 RNASEKQ6P5S7 137 aaKnown RBP1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 TTC23LQ6PF05 361 aa1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 DEGS2Q6QHC5 323 aa1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 TMEM107Q6UX40 140 aa1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 LRRC31Q6UY01 552 aa1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 TPGS1Q6ZTW0 290 aa1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 PRSS41Q7RTY9 318 aa1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 LINC00523Q86TU6 105 aa1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 CDKL3Q8IVW4 592 aaPredicted RBP1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 VSTM4Q8IW00 320 aa1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 ST13P4Q8IZP2 240 aaPredicted RBP1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 GABRG1Q8N1C3 465 aa1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 LRRC75A-AS1Q8N1F1 130 aa1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 CCDC112Q8NEF3 446 aa1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 NPBQ8NG41 125 aa1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 OR9G1Q8NH87 305 aa1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 KIR2DL5BQ8NHK3 375 aa1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 ANGPTL6Q8NI99 470 aa1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 GPX8Q8TED1 209 aa1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 GLYATL2Q8WU03 294 aa1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 TMEM158Q8WZ71 300 aa1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 SLC38A4Q969I6 547 aa1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 PAGE5Q96GU1 130 aa1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 FCRL1Q96LA6 429 aa1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 ZNF578Q96N58 590 aaPredicted RBP1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 AMDHD1Q96NU7 426 aa1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 COPS8Q99627 209 aa1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 NAPGQ99747 312 aaPredicted RBP1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 HDHD3Q9BSH5 251 aaPredicted RBP1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 NAT9Q9BTE0 207 aa1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 SCRT1Q9BWW7 348 aa1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 BBS2Q9BXC9 721 aa1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 PLA2G2FQ9BZM2 168 aa1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 C20orf85Q9H1P6 137 aa1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 GEMIN7Q9H840 131 aaKnown RBP1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 ELOVL3Q9HB03 270 aa1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 VCX3AQ9NNX9 186 aa1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 CCNB1IP1Q9NPC3 277 aa1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 POLE4Q9NR33 117 aa1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 PXMP2Q9NR77 195 aa1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 SLC17A5Q9NRA2 495 aa1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 SIGLEC8Q9NYZ4 499 aa1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 KIAA1549LQ6ZVL6 1849 aa1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 OBSL1O75147 1896 aa1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 PLXNB3Q9ULL4 1909 aa1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 NCOR2Q9Y618 2525 aa1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 VPS13AQ96RL7 3174 aa1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 BAHCC1Q9P281 2608 aa1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 DOCK9Q9BZ29 2069 aa1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 PCNX2A6NKB5 2137 aa1.81□□□□□ -2.12
HDGFL3-202ENST00000562702 COL4A2P08572 1712 aa1.8□□□□□ -2.12
HDGFL3-202ENST00000562702 HELZP42694 1942 aaKnown RBP1.8□□□□□ -2.12
HDGFL3-202ENST00000562702 PTPRBP23467 1997 aa1.8□□□□□ -2.12
HDGFL3-202ENST00000562702 MYH10P35580 1976 aa1.8□□□□□ -2.12
HDGFL3-202ENST00000562702 MYH11P35749 1972 aa1.8□□□□□ -2.12
HDGFL3-202ENST00000562702 ARHGAP21Q5T5U3 1957 aa1.8□□□□□ -2.12
HDGFL3-202ENST00000562702 CITO14578 2027 aa1.8□□□□□ -2.12
HDGFL3-202ENST00000562702 PPIAL4EA0A075B759 164 aa1.8□□□□□ -2.12
HDGFL3-202ENST00000562702 IGKV1D-8A0A087WSZ0 117 aa1.8□□□□□ -2.12
HDGFL3-202ENST00000562702 TRAV25A0A0B4J276 109 aa1.8□□□□□ -2.12
HDGFL3-202ENST00000562702 A0A0G2JN53 185 aa1.8□□□□□ -2.12
HDGFL3-202ENST00000562702 TRBV11-1A0A0K0K1C0 115 aa1.8□□□□□ -2.12
HDGFL3-202ENST00000562702 C1orf232A0A0U1RR37 186 aa1.8□□□□□ -2.12
HDGFL3-202ENST00000562702 A0A1B0GVL5 298 aa1.8□□□□□ -2.12
HDGFL3-202ENST00000562702 GSTTP1A0A1W2PQM5 241 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms