RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 UBL3O95164 117 aa6.78□□□□□ -1.32
TCF4-216ENST00000562680 SLC2A10O95528 541 aa6.78□□□□□ -1.32
TCF4-216ENST00000562680 SHBQ15464 509 aa6.78□□□□□ -1.32
TCF4-216ENST00000562680 CYB5R2Q6BCY4 276 aa6.78□□□□□ -1.32
TCF4-216ENST00000562680 FAM122BQ7Z309 247 aa6.78□□□□□ -1.32
TCF4-216ENST00000562680 MDGA2Q7Z553 956 aa6.78□□□□□ -1.32
TCF4-216ENST00000562680 C10orf111Q8N326 155 aa6.78□□□□□ -1.32
TCF4-216ENST00000562680 LRRC18Q8N456 261 aa6.78□□□□□ -1.32
TCF4-216ENST00000562680 OR2M3Q8NG83 312 aa6.78□□□□□ -1.32
TCF4-216ENST00000562680 OR51T1Q8NGJ9 327 aa6.78□□□□□ -1.32
TCF4-216ENST00000562680 OR6X1Q8NH79 312 aa6.78□□□□□ -1.32
TCF4-216ENST00000562680 RPL3LQ92901 407 aaKnown RBP6.78□□□□□ -1.32
TCF4-216ENST00000562680 SPSB2Q99619 263 aa6.78□□□□□ -1.32
TCF4-216ENST00000562680 ATF6BQ99941 703 aa6.78□□□□□ -1.32
TCF4-216ENST00000562680 ZNF701Q9NV72 531 aaPredicted RBP6.78□□□□□ -1.32
TCF4-216ENST00000562680 C14orf119Q9NWQ9 140 aa6.78□□□□□ -1.32
TCF4-216ENST00000562680 MED29Q9NX70 200 aa6.78□□□□□ -1.32
TCF4-216ENST00000562680 TAS2R16Q9NYV7 291 aa6.78□□□□□ -1.32
TCF4-216ENST00000562680 RCE1Q9Y256 329 aa6.78□□□□□ -1.32
TCF4-216ENST00000562680 PCM1Q15154 2024 aa6.78□□□□□ -1.32
TCF4-216ENST00000562680 IGHV1-45A0A0A0MS14 117 aa6.78□□□□□ -1.32
TCF4-216ENST00000562680 C4orf51C9J302 202 aa6.78□□□□□ -1.32
TCF4-216ENST00000562680 TRAPPC2LH3BP13 241 aa6.78□□□□□ -1.32
TCF4-216ENST00000562680 PLPP3O14495 311 aa6.78□□□□□ -1.32
TCF4-216ENST00000562680 LY86O95711 162 aa6.78□□□□□ -1.32
TCF4-216ENST00000562680 PMS2P2O95744 297 aa6.78□□□□□ -1.32
TCF4-216ENST00000562680 GABRA1P14867 456 aa6.78□□□□□ -1.32
TCF4-216ENST00000562680 TNFSF8P32971 234 aa6.78□□□□□ -1.32
TCF4-216ENST00000562680 GP2P55259 537 aaKnown RBP6.78□□□□□ -1.32
TCF4-216ENST00000562680 TAS2R31P59538 309 aa6.78□□□□□ -1.32
TCF4-216ENST00000562680 RIN1Q13671 783 aa6.78□□□□□ -1.32
TCF4-216ENST00000562680 GK2Q14410 553 aaPredicted RBP6.78□□□□□ -1.32
TCF4-216ENST00000562680 WIPI1Q5MNZ9 446 aaPredicted RBP6.78□□□□□ -1.32
TCF4-216ENST00000562680 BEST4Q8NFU0 473 aa6.78□□□□□ -1.32
TCF4-216ENST00000562680 OR5H2Q8NGV7 314 aa6.78□□□□□ -1.32
TCF4-216ENST00000562680 OTOSQ8NHW6 89 aa6.78□□□□□ -1.32
TCF4-216ENST00000562680 FLVCR1-AS1Q8TAF5 88 aa6.78□□□□□ -1.32
TCF4-216ENST00000562680 SYNPRQ8TBG9 265 aa6.78□□□□□ -1.32
TCF4-216ENST00000562680 TECTBQ96PL2 329 aa6.78□□□□□ -1.32
TCF4-216ENST00000562680 TOLLIPQ9H0E2 274 aa6.78□□□□□ -1.32
TCF4-216ENST00000562680 C20orf141Q9NUB4 165 aa6.78□□□□□ -1.32
TCF4-216ENST00000562680 ZNF69Q9UC07 566 aa6.78□□□□□ -1.32
TCF4-216ENST00000562680 IGKV3D-11A0A0A0MRZ8 115 aa6.78□□□□□ -1.32
TCF4-216ENST00000562680 OR2M5A3KFT3 312 aa6.78□□□□□ -1.32
TCF4-216ENST00000562680 ZNF705GA8MUZ8 300 aaPredicted RBP6.78□□□□□ -1.32
TCF4-216ENST00000562680 FFAR1O14842 300 aa6.78□□□□□ -1.32
TCF4-216ENST00000562680 IGKV3-11P04433 115 aa6.78□□□□□ -1.32
TCF4-216ENST00000562680 RPS18P62269 152 aaKnown RBP6.78□□□□□ -1.32
TCF4-216ENST00000562680 FZD5Q13467 585 aa6.78□□□□□ -1.32
TCF4-216ENST00000562680 ZNF585AQ6P3V2 769 aa6.78□□□□□ -1.32
TCF4-216ENST00000562680 ZFP82Q8N141 532 aa6.78□□□□□ -1.32
TCF4-216ENST00000562680 OR13C9Q8NGT0 318 aa6.78□□□□□ -1.32
TCF4-216ENST00000562680 FGF11Q92914 225 aa6.78□□□□□ -1.32
TCF4-216ENST00000562680 CNTNAP3BQ96NU0 1288 aa6.78□□□□□ -1.32
TCF4-216ENST00000562680 FOXN4Q96NZ1 517 aa6.78□□□□□ -1.32
TCF4-216ENST00000562680 SYT3Q9BQG1 590 aa6.78□□□□□ -1.32
TCF4-216ENST00000562680 C5orf51A6NDU8 294 aa6.77□□□□□ -1.32
TCF4-216ENST00000562680 TRABD2BA6NFA1 517 aa6.77□□□□□ -1.32
TCF4-216ENST00000562680 M0R135 149 aa6.77□□□□□ -1.32
TCF4-216ENST00000562680 HRKO00198 91 aa6.77□□□□□ -1.32
TCF4-216ENST00000562680 BHLHE40O14503 412 aa6.77□□□□□ -1.32
TCF4-216ENST00000562680 TNFSF11O14788 317 aa6.77□□□□□ -1.32
TCF4-216ENST00000562680 LYRM1O43325 122 aa6.77□□□□□ -1.32
TCF4-216ENST00000562680 ATG12O94817 140 aa6.77□□□□□ -1.32
TCF4-216ENST00000562680 SEMG1P04279 462 aa6.77□□□□□ -1.32
TCF4-216ENST00000562680 H2AFB2P0C5Z0 115 aa6.77□□□□□ -1.32
TCF4-216ENST00000562680 CPT2P23786 658 aa6.77□□□□□ -1.32
TCF4-216ENST00000562680 CALCRP30988 508 aa6.77□□□□□ -1.32
TCF4-216ENST00000562680 PTGER4P35408 488 aa6.77□□□□□ -1.32
TCF4-216ENST00000562680 CX3CR1P49238 355 aa6.77□□□□□ -1.32
TCF4-216ENST00000562680 MOB3CQ70IA8 216 aa6.77□□□□□ -1.32
TCF4-216ENST00000562680 SKA3Q8IX90 412 aa6.77□□□□□ -1.32
TCF4-216ENST00000562680 OR11L1Q8NGX0 322 aa6.77□□□□□ -1.32
TCF4-216ENST00000562680 ZNF799Q96GE5 643 aa6.77□□□□□ -1.32
TCF4-216ENST00000562680 PRRT1Q99946 306 aa6.77□□□□□ -1.32
TCF4-216ENST00000562680 ZFP57Q9NU63 452 aa6.77□□□□□ -1.32
TCF4-216ENST00000562680 SLC22A23A1A5C7 686 aa6.77□□□□□ -1.33
TCF4-216ENST00000562680 LIPT2A6NK58 231 aa6.77□□□□□ -1.33
TCF4-216ENST00000562680 SMPD2O60906 423 aa6.77□□□□□ -1.33
TCF4-216ENST00000562680 LALBAP00709 142 aa6.77□□□□□ -1.33
TCF4-216ENST00000562680 LIFP15018 202 aa6.77□□□□□ -1.33
TCF4-216ENST00000562680 ACAA2P42765 397 aaKnown RBP6.77□□□□□ -1.33
TCF4-216ENST00000562680 CDC34P49427 236 aaPredicted RBP6.77□□□□□ -1.33
TCF4-216ENST00000562680 FHITP49789 147 aa6.77□□□□□ -1.33
TCF4-216ENST00000562680 SPOCK1Q08629 439 aa6.77□□□□□ -1.33
TCF4-216ENST00000562680 HABP2Q14520 560 aaPredicted RBP6.77□□□□□ -1.33
TCF4-216ENST00000562680 INO80EQ8NBZ0 244 aaPredicted RBP6.77□□□□□ -1.33
TCF4-216ENST00000562680 SFT2D1Q8WV19 159 aa6.77□□□□□ -1.33
TCF4-216ENST00000562680 MIB2Q96AX9 1013 aa6.77□□□□□ -1.33
TCF4-216ENST00000562680 ZNF775Q96BV0 537 aaPredicted RBP6.77□□□□□ -1.33
TCF4-216ENST00000562680 GNRHR2Q96P88 292 aa6.77□□□□□ -1.33
TCF4-216ENST00000562680 JAM3Q9BX67 310 aa6.77□□□□□ -1.33
TCF4-216ENST00000562680 ANGPTL4Q9BY76 406 aa6.77□□□□□ -1.33
TCF4-216ENST00000562680 GSX2Q9BZM3 304 aa6.77□□□□□ -1.33
TCF4-216ENST00000562680 ACOXLQ9NUZ1 547 aa6.77□□□□□ -1.33
TCF4-216ENST00000562680 STEAP1Q9UHE8 339 aa6.77□□□□□ -1.33
TCF4-216ENST00000562680 KIF25Q9UIL4 384 aa6.77□□□□□ -1.33
TCF4-216ENST00000562680 RAB22AQ9UL26 194 aa6.77□□□□□ -1.33
TCF4-216ENST00000562680 HS3ST3B1Q9Y662 390 aa6.77□□□□□ -1.33
TCF4-216ENST00000562680 A0A087X0M5 115 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms