RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 ZNF283Q8N7M2 679 aa8.66□□□□□ -1.02
SMG1-205ENST00000561947 OR52N4Q8NGI2 321 aa8.66□□□□□ -1.02
SMG1-205ENST00000561947 OR5D14Q8NGL3 314 aa8.66□□□□□ -1.02
SMG1-205ENST00000561947 OR4C16Q8NGL9 310 aa8.66□□□□□ -1.02
SMG1-205ENST00000561947 GPX8Q8TED1 209 aa8.66□□□□□ -1.02
SMG1-205ENST00000561947 NABP1Q96AH0 204 aa8.66□□□□□ -1.02
SMG1-205ENST00000561947 THOC3Q96J01 351 aaKnown RBP8.66□□□□□ -1.02
SMG1-205ENST00000561947 UQCC2Q9BRT2 126 aa8.66□□□□□ -1.02
SMG1-205ENST00000561947 UTP23Q9BRU9 249 aaKnown RBP8.66□□□□□ -1.02
SMG1-205ENST00000561947 GPR87Q9BY21 358 aa8.66□□□□□ -1.02
SMG1-205ENST00000561947 SLA2Q9H6Q3 261 aa8.66□□□□□ -1.02
SMG1-205ENST00000561947 METTL17Q9H7H0 456 aaPredicted RBP8.66□□□□□ -1.02
SMG1-205ENST00000561947 MRPS18CQ9Y3D5 142 aaKnown RBP8.66□□□□□ -1.02
SMG1-205ENST00000561947 C21orf140B9A014 251 aa8.66□□□□□ -1.02
SMG1-205ENST00000561947 TERTO14746 1132 aaKnown RBP8.66□□□□□ -1.02
SMG1-205ENST00000561947 FABP7O15540 132 aa8.66□□□□□ -1.02
SMG1-205ENST00000561947 HPXP02790 462 aa8.66□□□□□ -1.02
SMG1-205ENST00000561947 CXCL3P19876 107 aa8.66□□□□□ -1.02
SMG1-205ENST00000561947 CTSSP25774 331 aa8.66□□□□□ -1.02
SMG1-205ENST00000561947 OC90Q02509 493 aaPredicted RBP8.66□□□□□ -1.02
SMG1-205ENST00000561947 EIF3IQ13347 325 aaKnown RBP8.66□□□□□ -1.02
SMG1-205ENST00000561947 NDUFA5Q16718 116 aa8.66□□□□□ -1.02
SMG1-205ENST00000561947 Q5BKY6 102 aa8.66□□□□□ -1.02
SMG1-205ENST00000561947 METTL11BQ5VVY1 283 aa8.66□□□□□ -1.02
SMG1-205ENST00000561947 OR10K2Q6IF99 312 aa8.66□□□□□ -1.02
SMG1-205ENST00000561947 SLC25A25Q6KCM7 469 aa8.66□□□□□ -1.02
SMG1-205ENST00000561947 COMMD2Q86X83 199 aa8.66□□□□□ -1.02
SMG1-205ENST00000561947 C20orf196Q8IYI0 205 aa8.66□□□□□ -1.02
SMG1-205ENST00000561947 GJC3Q8NFK1 279 aa8.66□□□□□ -1.02
SMG1-205ENST00000561947 OR13C9Q8NGT0 318 aa8.66□□□□□ -1.02
SMG1-205ENST00000561947 ITFG2Q969R8 447 aa8.66□□□□□ -1.02
SMG1-205ENST00000561947 MS4A3Q96HJ5 214 aa8.66□□□□□ -1.02
SMG1-205ENST00000561947 HYLS1Q96M11 299 aa8.66□□□□□ -1.02
SMG1-205ENST00000561947 SFXN2Q96NB2 322 aa8.66□□□□□ -1.02
SMG1-205ENST00000561947 ULBP2Q9BZM5 246 aa8.66□□□□□ -1.02
SMG1-205ENST00000561947 GPR84Q9NQS5 396 aa8.66□□□□□ -1.02
SMG1-205ENST00000561947 ZNF319Q9P2F9 582 aa8.66□□□□□ -1.02
SMG1-205ENST00000561947 MYEF2Q9P2K5 600 aaKnown RBP8.66□□□□□ -1.02
SMG1-205ENST00000561947 WDFY4Q6ZS81 3184 aa8.65□□□□□ -1.02
SMG1-205ENST00000561947 MEIKINA0A087WXM9 373 aa8.65□□□□□ -1.02
SMG1-205ENST00000561947 MEIS3P1A6NDR6 274 aa8.65□□□□□ -1.02
SMG1-205ENST00000561947 SSNA1O43805 119 aa8.65□□□□□ -1.02
SMG1-205ENST00000561947 ICMTO60725 284 aa8.65□□□□□ -1.02
SMG1-205ENST00000561947 ERCC1P07992 297 aaPredicted RBP8.65□□□□□ -1.02
SMG1-205ENST00000561947 GTF2F2P13984 249 aa8.65□□□□□ -1.02
SMG1-205ENST00000561947 CNR1P21554 472 aa8.65□□□□□ -1.02
SMG1-205ENST00000561947 ANOS1P23352 680 aa8.65□□□□□ -1.02
SMG1-205ENST00000561947 ZNF84P51523 738 aa8.65□□□□□ -1.02
SMG1-205ENST00000561947 MECP2P51608 486 aaKnown RBP8.65□□□□□ -1.02
SMG1-205ENST00000561947 CARD18P57730 90 aa8.65□□□□□ -1.02
SMG1-205ENST00000561947 ACTBP60709 375 aa8.65□□□□□ -1.02
SMG1-205ENST00000561947 ACTG1P63261 375 aa8.65□□□□□ -1.02
SMG1-205ENST00000561947 HIST1H3AP68431 136 aa8.65□□□□□ -1.02
SMG1-205ENST00000561947 PMPCAQ10713 525 aa8.65□□□□□ -1.02
SMG1-205ENST00000561947 WIPI1Q5MNZ9 446 aaPredicted RBP8.65□□□□□ -1.02
SMG1-205ENST00000561947 HIST2H3PS2Q5TEC6 136 aa8.65□□□□□ -1.02
SMG1-205ENST00000561947 JMJD6Q6NYC1 403 aaPredicted RBP8.65□□□□□ -1.02
SMG1-205ENST00000561947 TMEM53Q6P2H8 277 aa8.65□□□□□ -1.02
SMG1-205ENST00000561947 HIST2H3AQ71DI3 136 aa8.65□□□□□ -1.02
SMG1-205ENST00000561947 FAM57BQ71RH2 274 aa8.65□□□□□ -1.02
SMG1-205ENST00000561947 GAL3ST1Q99999 423 aa8.65□□□□□ -1.02
SMG1-205ENST00000561947 SOX7Q9BT81 388 aa8.65□□□□□ -1.02
SMG1-205ENST00000561947 RBM24Q9BX46 236 aaKnown RBP8.65□□□□□ -1.02
SMG1-205ENST00000561947 SCPEP1Q9HB40 452 aa8.65□□□□□ -1.02
SMG1-205ENST00000561947 RAB22AQ9UL26 194 aa8.65□□□□□ -1.02
SMG1-205ENST00000561947 ING4Q9UNL4 249 aa8.65□□□□□ -1.02
SMG1-205ENST00000561947 PINLYPA6NC86 204 aa8.65□□□□□ -1.03
SMG1-205ENST00000561947 TRAPPC6AO75865 159 aa8.65□□□□□ -1.03
SMG1-205ENST00000561947 BPNT1O95861 308 aa8.65□□□□□ -1.03
SMG1-205ENST00000561947 LPLP06858 475 aa8.65□□□□□ -1.03
SMG1-205ENST00000561947 AKAIN1P0CW23 69 aa8.65□□□□□ -1.03
SMG1-205ENST00000561947 ABOP16442 354 aa8.65□□□□□ -1.03
SMG1-205ENST00000561947 GDF1P27539 372 aa8.65□□□□□ -1.03
SMG1-205ENST00000561947 RAD52P43351 418 aa8.65□□□□□ -1.03
SMG1-205ENST00000561947 GLDNQ6ZMI3 551 aaPredicted RBP8.65□□□□□ -1.03
SMG1-205ENST00000561947 ZNF782Q6ZMW2 699 aaPredicted RBP8.65□□□□□ -1.03
SMG1-205ENST00000561947 DOK3Q7L591 496 aa8.65□□□□□ -1.03
SMG1-205ENST00000561947 CLEC1AQ8NC01 280 aa8.65□□□□□ -1.03
SMG1-205ENST00000561947 OR2V1Q8NHB1 315 aa8.65□□□□□ -1.03
SMG1-205ENST00000561947 SEH1LQ96EE3 360 aa8.65□□□□□ -1.03
SMG1-205ENST00000561947 ADGRG7Q96K78 797 aa8.65□□□□□ -1.03
SMG1-205ENST00000561947 FAM71F1Q96KD3 344 aaPredicted RBP8.65□□□□□ -1.03
SMG1-205ENST00000561947 CDC6Q99741 560 aa8.65□□□□□ -1.03
SMG1-205ENST00000561947 EDEM2Q9BV94 578 aa8.65□□□□□ -1.03
SMG1-205ENST00000561947 ZFP64Q9NPA5 681 aa8.65□□□□□ -1.03
SMG1-205ENST00000561947 SLC5A6Q9Y289 635 aa8.65□□□□□ -1.03
SMG1-205ENST00000561947 FLVCR1Q9Y5Y0 555 aa8.65□□□□□ -1.03
SMG1-205ENST00000561947 F10P00742 488 aa8.64□□□□□ -1.03
SMG1-205ENST00000561947 IL5P05113 134 aa8.64□□□□□ -1.03
SMG1-205ENST00000561947 QRFPP83859 136 aa8.64□□□□□ -1.03
SMG1-205ENST00000561947 GALK2Q01415 458 aa8.64□□□□□ -1.03
SMG1-205ENST00000561947 RBMS2Q15434 407 aaKnown RBP8.64□□□□□ -1.03
SMG1-205ENST00000561947 MOGAT2Q3SYC2 334 aa8.64□□□□□ -1.03
SMG1-205ENST00000561947 CCDC92Q53HC0 331 aaPredicted RBP8.64□□□□□ -1.03
SMG1-205ENST00000561947 LAMTOR1Q6IAA8 161 aa8.64□□□□□ -1.03
SMG1-205ENST00000561947 Q6ZTK2 550 aa8.64□□□□□ -1.03
SMG1-205ENST00000561947 PGAP1Q75T13 922 aa8.64□□□□□ -1.03
SMG1-205ENST00000561947 OR5AS1Q8N127 324 aa8.64□□□□□ -1.03
SMG1-205ENST00000561947 SLC39A7Q92504 469 aa8.64□□□□□ -1.03
SMG1-205ENST00000561947 MED30Q96HR3 178 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms