RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 SLC18B1Q6NT16 456 aa13.49□□□□□ -0.25
LMX1B-204ENST00000561065 CORO6Q6QEF8 472 aa13.49□□□□□ -0.25
LMX1B-204ENST00000561065 SHFQ7M4L6 423 aa13.49□□□□□ -0.25
LMX1B-204ENST00000561065 ZDHHC13Q8IUH4 622 aa13.49□□□□□ -0.25
LMX1B-204ENST00000561065 OR6K6Q8NGW6 343 aa13.49□□□□□ -0.25
LMX1B-204ENST00000561065 OR5K1Q8NHB7 308 aa13.49□□□□□ -0.25
LMX1B-204ENST00000561065 RAB1CQ92928 201 aa13.49□□□□□ -0.25
LMX1B-204ENST00000561065 ZNF582Q96NG8 517 aaPredicted RBP13.49□□□□□ -0.25
LMX1B-204ENST00000561065 DDOQ99489 341 aa13.49□□□□□ -0.25
LMX1B-204ENST00000561065 OSBPL10Q9BXB5 764 aa13.49□□□□□ -0.25
LMX1B-204ENST00000561065 TRAV20A0A0B4J274 112 aa13.48□□□□□ -0.25
LMX1B-204ENST00000561065 PLPP2O43688 288 aa13.48□□□□□ -0.25
LMX1B-204ENST00000561065 SPI1P17947 270 aa13.48□□□□□ -0.25
LMX1B-204ENST00000561065 PYCR1P32322 319 aa13.48□□□□□ -0.25
LMX1B-204ENST00000561065 GGT2P36268 569 aa13.48□□□□□ -0.25
LMX1B-204ENST00000561065 ENTPD1P49961 510 aa13.48□□□□□ -0.25
LMX1B-204ENST00000561065 ESRRGP62508 458 aa13.48□□□□□ -0.25
LMX1B-204ENST00000561065 TNFAIP6P98066 277 aaPredicted RBP13.48□□□□□ -0.25
LMX1B-204ENST00000561065 HLXQ14774 488 aaPredicted RBP13.48□□□□□ -0.25
LMX1B-204ENST00000561065 RSPO1Q2MKA7 263 aaPredicted RBP13.48□□□□□ -0.25
LMX1B-204ENST00000561065 ZNF362Q5T0B9 420 aaPredicted RBP13.48□□□□□ -0.25
LMX1B-204ENST00000561065 CFAP77Q6ZQR2 320 aa13.48□□□□□ -0.25
LMX1B-204ENST00000561065 RHOUQ7L0Q8 258 aa13.48□□□□□ -0.25
LMX1B-204ENST00000561065 LINC00346Q8IVM7 164 aa13.48□□□□□ -0.25
LMX1B-204ENST00000561065 RFLNBQ8N5W9 214 aa13.48□□□□□ -0.25
LMX1B-204ENST00000561065 OR8D4Q8NGM9 314 aa13.48□□□□□ -0.25
LMX1B-204ENST00000561065 OR13G1Q8NGZ3 307 aa13.48□□□□□ -0.25
LMX1B-204ENST00000561065 RAB39BQ96DA2 213 aa13.48□□□□□ -0.25
LMX1B-204ENST00000561065 TMPRSS13Q9BYE2 586 aa13.48□□□□□ -0.25
LMX1B-204ENST00000561065 METTL17Q9H7H0 456 aaPredicted RBP13.48□□□□□ -0.25
LMX1B-204ENST00000561065 PAPOLBQ9NRJ5 636 aaKnown RBP13.48□□□□□ -0.25
LMX1B-204ENST00000561065 PTTG3PQ9NZH4 202 aa13.48□□□□□ -0.25
LMX1B-204ENST00000561065 LOC105371242A0A075B767 164 aa13.47□□□□□ -0.25
LMX1B-204ENST00000561065 IFNL4K9M1U5 179 aa13.47□□□□□ -0.25
LMX1B-204ENST00000561065 ZNF593O00488 134 aaPredicted RBP13.47□□□□□ -0.25
LMX1B-204ENST00000561065 PNPP00491 289 aa13.47□□□□□ -0.25
LMX1B-204ENST00000561065 IGHV2-70P01814 119 aa13.47□□□□□ -0.25
LMX1B-204ENST00000561065 LCATP04180 440 aa13.47□□□□□ -0.25
LMX1B-204ENST00000561065 PSKH1P11801 424 aa13.47□□□□□ -0.25
LMX1B-204ENST00000561065 ANOS1P23352 680 aa13.47□□□□□ -0.25
LMX1B-204ENST00000561065 PRSS12P56730 875 aa13.47□□□□□ -0.25
LMX1B-204ENST00000561065 KRTAP27-1Q3LI81 207 aa13.47□□□□□ -0.25
LMX1B-204ENST00000561065 ACSM5Q6NUN0 579 aa13.47□□□□□ -0.25
LMX1B-204ENST00000561065 DRAM2Q6UX65 266 aa13.47□□□□□ -0.25
LMX1B-204ENST00000561065 FBXW12Q6X9E4 464 aa13.47□□□□□ -0.25
LMX1B-204ENST00000561065 OR5AS1Q8N127 324 aa13.47□□□□□ -0.25
LMX1B-204ENST00000561065 OR2Z1Q8NG97 314 aa13.47□□□□□ -0.25
LMX1B-204ENST00000561065 OR9Q1Q8NGQ5 310 aa13.47□□□□□ -0.25
LMX1B-204ENST00000561065 OR4Q3Q8NH05 313 aa13.47□□□□□ -0.25
LMX1B-204ENST00000561065 ITLN1Q8WWA0 313 aa13.47□□□□□ -0.25
LMX1B-204ENST00000561065 SIGLEC11Q96RL6 698 aa13.47□□□□□ -0.25
LMX1B-204ENST00000561065 GAL3ST1Q99999 423 aa13.47□□□□□ -0.25
LMX1B-204ENST00000561065 NMNAT2Q9BZQ4 307 aa13.47□□□□□ -0.25
LMX1B-204ENST00000561065 TOR3AQ9H497 397 aa13.47□□□□□ -0.25
LMX1B-204ENST00000561065 PNRC2Q9NPJ4 139 aaKnown RBP13.47□□□□□ -0.25
LMX1B-204ENST00000561065 MRPL22Q9NWU5 206 aaKnown RBP13.47□□□□□ -0.25
LMX1B-204ENST00000561065 H2AFY2Q9P0M6 372 aaPredicted RBP13.47□□□□□ -0.25
LMX1B-204ENST00000561065 ISPDA4D126 451 aa13.46□□□□□ -0.25
LMX1B-204ENST00000561065 PRODHO43272 600 aa13.46□□□□□ -0.25
LMX1B-204ENST00000561065 TCF21O43680 179 aa13.46□□□□□ -0.25
LMX1B-204ENST00000561065 TIPRLO75663 272 aa13.46□□□□□ -0.25
LMX1B-204ENST00000561065 GLCEO94923 617 aa13.46□□□□□ -0.25
LMX1B-204ENST00000561065 SPARCP09486 303 aa13.46□□□□□ -0.25
LMX1B-204ENST00000561065 PRKACGP22612 351 aa13.46□□□□□ -0.25
LMX1B-204ENST00000561065 GSTT1P30711 240 aa13.46□□□□□ -0.25
LMX1B-204ENST00000561065 SLC6A9P48067 706 aa13.46□□□□□ -0.25
LMX1B-204ENST00000561065 GRB2P62993 217 aaKnown RBP13.46□□□□□ -0.25
LMX1B-204ENST00000561065 CDK5Q00535 292 aa13.46□□□□□ -0.25
LMX1B-204ENST00000561065 ATP6AP1Q15904 470 aa13.46□□□□□ -0.25
LMX1B-204ENST00000561065 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.46□□□□□ -0.25
LMX1B-204ENST00000561065 PARP8Q8N3A8 854 aa13.46□□□□□ -0.25
LMX1B-204ENST00000561065 SEMA6DQ8NFY4 1073 aa13.46□□□□□ -0.25
LMX1B-204ENST00000561065 OR51L1Q8NGJ5 315 aa13.46□□□□□ -0.25
LMX1B-204ENST00000561065 ZNRF4Q8WWF5 429 aa13.46□□□□□ -0.25
LMX1B-204ENST00000561065 DUS3LQ96G46 650 aaKnown RBP13.46□□□□□ -0.25
LMX1B-204ENST00000561065 INTS14Q96SY0 518 aa13.46□□□□□ -0.25
LMX1B-204ENST00000561065 C1QTNF5Q9BXJ0 243 aa13.46□□□□□ -0.25
LMX1B-204ENST00000561065 SLC22A4Q9H015 551 aa13.46□□□□□ -0.25
LMX1B-204ENST00000561065 OPA3Q9H6K4 179 aa13.46□□□□□ -0.25
LMX1B-204ENST00000561065 CENPMQ9NSP4 180 aa13.46□□□□□ -0.25
LMX1B-204ENST00000561065 TMEM106BQ9NUM4 274 aa13.46□□□□□ -0.25
LMX1B-204ENST00000561065 IL19Q9UHD0 177 aa13.46□□□□□ -0.25
LMX1B-204ENST00000561065 NPTNQ9Y639 398 aa13.46□□□□□ -0.25
LMX1B-204ENST00000561065 TVP23AA6NH52 213 aa13.45□□□□□ -0.26
LMX1B-204ENST00000561065 ZNF878C9JN71 531 aa13.45□□□□□ -0.26
LMX1B-204ENST00000561065 M0R135 149 aa13.45□□□□□ -0.26
LMX1B-204ENST00000561065 VENTXO95231 258 aa13.45□□□□□ -0.26
LMX1B-204ENST00000561065 ACSM4P0C7M7 580 aa13.45□□□□□ -0.26
LMX1B-204ENST00000561065 CRISP1P54107 249 aa13.45□□□□□ -0.26
LMX1B-204ENST00000561065 RAD23AP54725 363 aa13.45□□□□□ -0.26
LMX1B-204ENST00000561065 SNAPC1Q16533 368 aa13.45□□□□□ -0.26
LMX1B-204ENST00000561065 PCK2Q16822 640 aa13.45□□□□□ -0.26
LMX1B-204ENST00000561065 SLC35D3Q5M8T2 416 aa13.45□□□□□ -0.26
LMX1B-204ENST00000561065 OR2T2Q6IF00 324 aa13.45□□□□□ -0.26
LMX1B-204ENST00000561065 FAHD2BQ6P2I3 314 aaPredicted RBP13.45□□□□□ -0.26
LMX1B-204ENST00000561065 LYPD4Q6UWN0 246 aa13.45□□□□□ -0.26
LMX1B-204ENST00000561065 COLCA1Q6ZS62 124 aa13.45□□□□□ -0.26
LMX1B-204ENST00000561065 PGAP1Q75T13 922 aa13.45□□□□□ -0.26
LMX1B-204ENST00000561065 DCXRQ7Z4W1 244 aa13.45□□□□□ -0.26
LMX1B-204ENST00000561065 TMEM179BQ7Z7N9 219 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms