RNA–Protein interactions for RNA: ENST00000560987.5

SNRPA1-214, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-214ENST00000560987 ATPIF1Q9UII2 106 aa7.71□□□□□ -1.18
SNRPA1-214ENST00000560987 TMEFF2Q9UIK5 374 aaPredicted RBP7.71□□□□□ -1.18
SNRPA1-214ENST00000560987 LAMP5Q9UJQ1 280 aa7.71□□□□□ -1.18
SNRPA1-214ENST00000560987 ZDHHC8Q9ULC8 765 aa7.71□□□□□ -1.18
SNRPA1-214ENST00000560987 C2CD3Q4AC94 2353 aa7.7□□□□□ -1.18
SNRPA1-214ENST00000560987 GGT3PA6NGU5 568 aa7.7□□□□□ -1.18
SNRPA1-214ENST00000560987 NDUFS8O00217 210 aa7.7□□□□□ -1.18
SNRPA1-214ENST00000560987 EI24O14681 340 aa7.7□□□□□ -1.18
SNRPA1-214ENST00000560987 PPIHO43447 177 aaKnown RBP7.7□□□□□ -1.18
SNRPA1-214ENST00000560987 APOC1P02654 83 aa7.7□□□□□ -1.18
SNRPA1-214ENST00000560987 LYNP07948 512 aa7.7□□□□□ -1.18
SNRPA1-214ENST00000560987 MRPL3P09001 348 aaKnown RBP7.7□□□□□ -1.18
SNRPA1-214ENST00000560987 SLC2A1P11166 492 aa7.7□□□□□ -1.18
SNRPA1-214ENST00000560987 SELEP16581 610 aa7.7□□□□□ -1.18
SNRPA1-214ENST00000560987 USF1P22415 310 aaPredicted RBP7.7□□□□□ -1.18
SNRPA1-214ENST00000560987 NR4A2P43354 598 aa7.7□□□□□ -1.18
SNRPA1-214ENST00000560987 CDC42P60953 191 aa7.7□□□□□ -1.18
SNRPA1-214ENST00000560987 TNFAIP6P98066 277 aaPredicted RBP7.7□□□□□ -1.18
SNRPA1-214ENST00000560987 GABPB1Q06547 395 aaPredicted RBP7.7□□□□□ -1.18
SNRPA1-214ENST00000560987 SLX4IPQ5VYV7 408 aa7.7□□□□□ -1.18
SNRPA1-214ENST00000560987 C12orf73Q69YU5 71 aa7.7□□□□□ -1.18
SNRPA1-214ENST00000560987 DRAM2Q6UX65 266 aa7.7□□□□□ -1.18
SNRPA1-214ENST00000560987 USP51Q70EK9 711 aa7.7□□□□□ -1.18
SNRPA1-214ENST00000560987 SLC16A9Q7RTY1 509 aa7.7□□□□□ -1.18
SNRPA1-214ENST00000560987 MRPL21Q7Z2W9 205 aaKnown RBP7.7□□□□□ -1.18
SNRPA1-214ENST00000560987 KRT77Q7Z794 578 aa7.7□□□□□ -1.18
SNRPA1-214ENST00000560987 TIGD4Q8IY51 512 aa7.7□□□□□ -1.18
SNRPA1-214ENST00000560987 PQLC1Q8N2U9 271 aa7.7□□□□□ -1.18
SNRPA1-214ENST00000560987 CBR4Q8N4T8 237 aa7.7□□□□□ -1.18
SNRPA1-214ENST00000560987 BHLHE23Q8NDY6 225 aa7.7□□□□□ -1.18
SNRPA1-214ENST00000560987 OR10S1Q8NGN2 331 aa7.7□□□□□ -1.18
SNRPA1-214ENST00000560987 TMEM163Q8TC26 289 aa7.7□□□□□ -1.18
SNRPA1-214ENST00000560987 SPRYD4Q8WW59 207 aaPredicted RBP7.7□□□□□ -1.18
SNRPA1-214ENST00000560987 CCL17Q92583 94 aa7.7□□□□□ -1.18
SNRPA1-214ENST00000560987 ZNF582Q96NG8 517 aaPredicted RBP7.7□□□□□ -1.18
SNRPA1-214ENST00000560987 C1QTNF5Q9BXJ0 243 aa7.7□□□□□ -1.18
SNRPA1-214ENST00000560987 PNRC2Q9NPJ4 139 aaKnown RBP7.7□□□□□ -1.18
SNRPA1-214ENST00000560987 DLL4Q9NR61 685 aa7.7□□□□□ -1.18
SNRPA1-214ENST00000560987 TMEM100Q9NV29 134 aa7.7□□□□□ -1.18
SNRPA1-214ENST00000560987 IMPAD1Q9NX62 359 aa7.7□□□□□ -1.18
SNRPA1-214ENST00000560987 IGHV1-69-2A0A0G2JMI3 117 aa7.69□□□□□ -1.18
SNRPA1-214ENST00000560987 ERICH4A6NGS2 130 aa7.69□□□□□ -1.18
SNRPA1-214ENST00000560987 J3QW42 95 aa7.69□□□□□ -1.18
SNRPA1-214ENST00000560987 ICMTO60725 284 aa7.69□□□□□ -1.18
SNRPA1-214ENST00000560987 IGHV1-46P01743 117 aa7.69□□□□□ -1.18
SNRPA1-214ENST00000560987 ALPLP05186 524 aa7.69□□□□□ -1.18
SNRPA1-214ENST00000560987 PSKH1P11801 424 aa7.69□□□□□ -1.18
SNRPA1-214ENST00000560987 HOXB4P17483 251 aaPredicted RBP7.69□□□□□ -1.18
SNRPA1-214ENST00000560987 KITLGP21583 273 aa7.69□□□□□ -1.18
SNRPA1-214ENST00000560987 SLC2A5P22732 501 aa7.69□□□□□ -1.18
SNRPA1-214ENST00000560987 GPR6P46095 362 aaPredicted RBP7.69□□□□□ -1.18
SNRPA1-214ENST00000560987 CX3CR1P49238 355 aa7.69□□□□□ -1.18
SNRPA1-214ENST00000560987 MMP15P51511 669 aa7.69□□□□□ -1.18
SNRPA1-214ENST00000560987 ALDH3A2P51648 485 aa7.69□□□□□ -1.18
SNRPA1-214ENST00000560987 PRSS12P56730 875 aa7.69□□□□□ -1.18
SNRPA1-214ENST00000560987 PPP2R2BQ00005 443 aa7.69□□□□□ -1.18
SNRPA1-214ENST00000560987 PCK2Q16822 640 aa7.69□□□□□ -1.18
SNRPA1-214ENST00000560987 TIGD6Q17RP2 521 aa7.69□□□□□ -1.18
SNRPA1-214ENST00000560987 LRRC36Q1X8D7 754 aa7.69□□□□□ -1.18
SNRPA1-214ENST00000560987 HFEQ30201 348 aa7.69□□□□□ -1.18
SNRPA1-214ENST00000560987 GFOD2Q3B7J2 385 aa7.69□□□□□ -1.18
SNRPA1-214ENST00000560987 KCTD18Q6PI47 426 aaPredicted RBP7.69□□□□□ -1.18
SNRPA1-214ENST00000560987 FAM57BQ71RH2 274 aa7.69□□□□□ -1.18
SNRPA1-214ENST00000560987 PGAP1Q75T13 922 aa7.69□□□□□ -1.18
SNRPA1-214ENST00000560987 GALNT4Q8N4A0 578 aa7.69□□□□□ -1.18
SNRPA1-214ENST00000560987 OR13G1Q8NGZ3 307 aa7.69□□□□□ -1.18
SNRPA1-214ENST00000560987 OTOSQ8NHW6 89 aa7.69□□□□□ -1.18
SNRPA1-214ENST00000560987 ST7LQ8TDW4 575 aa7.69□□□□□ -1.18
SNRPA1-214ENST00000560987 PGAM5Q96HS1 289 aa7.69□□□□□ -1.18
SNRPA1-214ENST00000560987 COX4I2Q96KJ9 171 aa7.69□□□□□ -1.18
SNRPA1-214ENST00000560987 DIRC2Q96SL1 478 aa7.69□□□□□ -1.18
SNRPA1-214ENST00000560987 YIPF3Q9GZM5 350 aa7.69□□□□□ -1.18
SNRPA1-214ENST00000560987 TOR3AQ9H497 397 aa7.69□□□□□ -1.18
SNRPA1-214ENST00000560987 MARCH7Q9H992 704 aa7.69□□□□□ -1.18
SNRPA1-214ENST00000560987 SAP30LQ9HAJ7 183 aa7.69□□□□□ -1.18
SNRPA1-214ENST00000560987 YAE1D1Q9NRH1 226 aa7.69□□□□□ -1.18
SNRPA1-214ENST00000560987 DDX28Q9NUL7 540 aaKnown RBP7.69□□□□□ -1.18
SNRPA1-214ENST00000560987 NKIRAS2Q9NYR9 191 aa7.69□□□□□ -1.18
SNRPA1-214ENST00000560987 CGGBP1Q9UFW8 167 aaPredicted RBP7.69□□□□□ -1.18
SNRPA1-214ENST00000560987 IKZF2Q9UKS7 526 aa7.69□□□□□ -1.18
SNRPA1-214ENST00000560987 TMEM14AQ9Y6G1 99 aa7.69□□□□□ -1.18
SNRPA1-214ENST00000560987 ZSCAN5BA6NJL1 495 aa7.68□□□□□ -1.18
SNRPA1-214ENST00000560987 SLC22A31A6NKX4 558 aa7.68□□□□□ -1.18
SNRPA1-214ENST00000560987 PSMD9O00233 223 aa7.68□□□□□ -1.18
SNRPA1-214ENST00000560987 HEXAP06865 529 aa7.68□□□□□ -1.18
SNRPA1-214ENST00000560987 ANPEPP15144 967 aa7.68□□□□□ -1.18
SNRPA1-214ENST00000560987 ACHEP22303 614 aa7.68□□□□□ -1.18
SNRPA1-214ENST00000560987 TMEM33P57088 247 aa7.68□□□□□ -1.18
SNRPA1-214ENST00000560987 MVKQ03426 396 aa7.68□□□□□ -1.18
SNRPA1-214ENST00000560987 ZNF92Q03936 586 aa7.68□□□□□ -1.18
SNRPA1-214ENST00000560987 LOXL1Q08397 574 aaPredicted RBP7.68□□□□□ -1.18
SNRPA1-214ENST00000560987 CDK5R2Q13319 367 aa7.68□□□□□ -1.18
SNRPA1-214ENST00000560987 GK2Q14410 553 aaPredicted RBP7.68□□□□□ -1.18
SNRPA1-214ENST00000560987 SNAI3Q3KNW1 292 aa7.68□□□□□ -1.18
SNRPA1-214ENST00000560987 KRTAP27-1Q3LI81 207 aa7.68□□□□□ -1.18
SNRPA1-214ENST00000560987 FAM209AQ5JX71 171 aa7.68□□□□□ -1.18
SNRPA1-214ENST00000560987 NXNL2Q5VZ03 156 aa7.68□□□□□ -1.18
SNRPA1-214ENST00000560987 CYB5R2Q6BCY4 276 aa7.68□□□□□ -1.18
SNRPA1-214ENST00000560987 LRRN1Q6UXK5 716 aa7.68□□□□□ -1.18
SNRPA1-214ENST00000560987 FBXW12Q6X9E4 464 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms