RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 PHF19Q5T6S3 580 aa14.75□□□□□ -0.05
TPM1-228ENST00000560975 OR2A2Q6IF42 318 aa14.75□□□□□ -0.05
TPM1-228ENST00000560975 PTCRAQ6ISU1 281 aaPredicted RBP14.75□□□□□ -0.05
TPM1-228ENST00000560975 FDX2Q6P4F2 183 aa14.75□□□□□ -0.05
TPM1-228ENST00000560975 VWCEQ96DN2 955 aa14.75□□□□□ -0.05
TPM1-228ENST00000560975 TMEM41AQ96HV5 264 aa14.75□□□□□ -0.05
TPM1-228ENST00000560975 ABHD6Q9BV23 337 aa14.75□□□□□ -0.05
TPM1-228ENST00000560975 TMPRSS5Q9H3S3 457 aa14.75□□□□□ -0.05
TPM1-228ENST00000560975 SLC2A4RGQ9NR83 387 aa14.75□□□□□ -0.05
TPM1-228ENST00000560975 MRPS23Q9Y3D9 190 aaKnown RBP14.75□□□□□ -0.05
TPM1-228ENST00000560975 HPGDP15428 266 aa14.74□□□□□ -0.05
TPM1-228ENST00000560975 IGFALSP35858 605 aa14.74□□□□□ -0.05
TPM1-228ENST00000560975 GNALP38405 381 aa14.74□□□□□ -0.05
TPM1-228ENST00000560975 ZP2Q05996 745 aa14.74□□□□□ -0.05
TPM1-228ENST00000560975 UNC119Q13432 240 aa14.74□□□□□ -0.05
TPM1-228ENST00000560975 CLINT1Q14677 625 aa14.74□□□□□ -0.05
TPM1-228ENST00000560975 CST6Q15828 149 aa14.74□□□□□ -0.05
TPM1-228ENST00000560975 DEFB110Q30KQ9 67 aa14.74□□□□□ -0.05
TPM1-228ENST00000560975 ANKRD55Q3KP44 614 aa14.74□□□□□ -0.05
TPM1-228ENST00000560975 CNKSR3Q6P9H4 555 aa14.74□□□□□ -0.05
TPM1-228ENST00000560975 CATSPERDQ86XM0 798 aa14.74□□□□□ -0.05
TPM1-228ENST00000560975 TMEM151BQ8IW70 566 aa14.74□□□□□ -0.05
TPM1-228ENST00000560975 TMEM230Q96A57 120 aa14.74□□□□□ -0.05
TPM1-228ENST00000560975 AQP10Q96PS8 301 aa14.74□□□□□ -0.05
TPM1-228ENST00000560975 C5orf66Q9H5L9 145 aa14.74□□□□□ -0.05
TPM1-228ENST00000560975 HHLA2Q9UM44 414 aa14.74□□□□□ -0.05
TPM1-228ENST00000560975 HEBP2Q9Y5Z4 205 aa14.74□□□□□ -0.05
TPM1-228ENST00000560975 A0A0A6YYH2 397 aa14.74□□□□□ -0.05
TPM1-228ENST00000560975 A6NJ64 397 aa14.74□□□□□ -0.05
TPM1-228ENST00000560975 PRR19A6NJB7 356 aa14.74□□□□□ -0.05
TPM1-228ENST00000560975 TGFBR3LH3BV60 316 aa14.74□□□□□ -0.05
TPM1-228ENST00000560975 P2RY10O00398 339 aa14.74□□□□□ -0.05
TPM1-228ENST00000560975 NME2P1O60361 137 aa14.74□□□□□ -0.05
TPM1-228ENST00000560975 RNF224P0DH78 156 aa14.74□□□□□ -0.05
TPM1-228ENST00000560975 CT45A8P0DMV1 189 aa14.74□□□□□ -0.05
TPM1-228ENST00000560975 CT45A9P0DMV2 189 aa14.74□□□□□ -0.05
TPM1-228ENST00000560975 SKP2Q13309 424 aa14.74□□□□□ -0.05
TPM1-228ENST00000560975 BIKQ13323 160 aa14.74□□□□□ -0.05
TPM1-228ENST00000560975 TMEM128Q5BJH2 165 aa14.74□□□□□ -0.05
TPM1-228ENST00000560975 CT45A2Q5DJT8 189 aa14.74□□□□□ -0.05
TPM1-228ENST00000560975 EIF5AL1Q6IS14 154 aaKnown RBP14.74□□□□□ -0.05
TPM1-228ENST00000560975 AKR7LQ8NHP1 331 aa14.74□□□□□ -0.05
TPM1-228ENST00000560975 SLC22A18Q96BI1 424 aa14.74□□□□□ -0.05
TPM1-228ENST00000560975 G6PC3Q9BUM1 346 aa14.74□□□□□ -0.05
TPM1-228ENST00000560975 RAB22AQ9UL26 194 aa14.74□□□□□ -0.05
TPM1-228ENST00000560975 FLVCR1Q9Y5Y0 555 aa14.74□□□□□ -0.05
TPM1-228ENST00000560975 A0A1B0GV50 99 aa14.73□□□□□ -0.05
TPM1-228ENST00000560975 A0A1W2PQU0 124 aa14.73□□□□□ -0.05
TPM1-228ENST00000560975 ZNF729A6NN14 1252 aaPredicted RBP14.73□□□□□ -0.05
TPM1-228ENST00000560975 C17orf51A8MQB3 221 aa14.73□□□□□ -0.05
TPM1-228ENST00000560975 HCRTR1O43613 425 aa14.73□□□□□ -0.05
TPM1-228ENST00000560975 PNMTP11086 282 aa14.73□□□□□ -0.05
TPM1-228ENST00000560975 GPX4P36969 197 aaPredicted RBP14.73□□□□□ -0.05
TPM1-228ENST00000560975 CSNK1EP49674 416 aaKnown RBP14.73□□□□□ -0.05
TPM1-228ENST00000560975 SULT1A2P50226 295 aa14.73□□□□□ -0.05
TPM1-228ENST00000560975 GAB4Q2WGN9 574 aa14.73□□□□□ -0.05
TPM1-228ENST00000560975 CLEC9AQ6UXN8 241 aa14.73□□□□□ -0.05
TPM1-228ENST00000560975 HOGA1Q86XE5 327 aa14.73□□□□□ -0.05
TPM1-228ENST00000560975 METTL21AQ8WXB1 218 aa14.73□□□□□ -0.05
TPM1-228ENST00000560975 NICN1Q9BSH3 213 aa14.73□□□□□ -0.05
TPM1-228ENST00000560975 EIF5A2Q9GZV4 153 aaKnown RBP14.73□□□□□ -0.05
TPM1-228ENST00000560975 PPIHO43447 177 aaKnown RBP14.73□□□□□ -0.05
TPM1-228ENST00000560975 GDI1P31150 447 aa14.73□□□□□ -0.05
TPM1-228ENST00000560975 TAS2R31P59538 309 aa14.73□□□□□ -0.05
TPM1-228ENST00000560975 CHRDL2Q6WN34 429 aa14.73□□□□□ -0.05
TPM1-228ENST00000560975 COX15Q7KZN9 410 aa14.73□□□□□ -0.05
TPM1-228ENST00000560975 CD300LFQ8TDQ1 290 aa14.73□□□□□ -0.05
TPM1-228ENST00000560975 RHOVQ96L33 236 aa14.73□□□□□ -0.05
TPM1-228ENST00000560975 APOOQ9BUR5 198 aa14.73□□□□□ -0.05
TPM1-228ENST00000560975 NRSN2Q9GZP1 204 aa14.73□□□□□ -0.05
TPM1-228ENST00000560975 TOLLIPQ9H0E2 274 aa14.73□□□□□ -0.05
TPM1-228ENST00000560975 MEGF11A6BM72 1044 aa14.72□□□□□ -0.05
TPM1-228ENST00000560975 NUDT21O43809 227 aaKnown RBP14.72□□□□□ -0.05
TPM1-228ENST00000560975 TSPAN15O95858 294 aa14.72□□□□□ -0.05
TPM1-228ENST00000560975 CTLA4P16410 223 aa14.72□□□□□ -0.05
TPM1-228ENST00000560975 ACTR1BP42025 376 aa14.72□□□□□ -0.05
TPM1-228ENST00000560975 STARD6P59095 220 aa14.72□□□□□ -0.05
TPM1-228ENST00000560975 DEFA6Q01524 100 aa14.72□□□□□ -0.05
TPM1-228ENST00000560975 ZNF616Q08AN1 781 aa14.72□□□□□ -0.05
TPM1-228ENST00000560975 EMC4Q5J8M3 183 aa14.72□□□□□ -0.05
TPM1-228ENST00000560975 KCTD18Q6PI47 426 aaPredicted RBP14.72□□□□□ -0.05
TPM1-228ENST00000560975 OR52N4Q8NGI2 321 aa14.72□□□□□ -0.05
TPM1-228ENST00000560975 OR14C36Q8NHC7 312 aa14.72□□□□□ -0.05
TPM1-228ENST00000560975 TERB2Q8NHR7 220 aa14.72□□□□□ -0.05
TPM1-228ENST00000560975 C16orf52Q8NHV5 167 aa14.72□□□□□ -0.05
TPM1-228ENST00000560975 HOXB13Q92826 284 aaPredicted RBP14.72□□□□□ -0.05
TPM1-228ENST00000560975 FGGYQ96C11 551 aa14.72□□□□□ -0.05
TPM1-228ENST00000560975 SPACA5Q96QH8 159 aa14.72□□□□□ -0.05
TPM1-228ENST00000560975 PTGES2Q9H7Z7 377 aa14.72□□□□□ -0.05
TPM1-228ENST00000560975 MED19A0JLT2 244 aaPredicted RBP14.72□□□□□ -0.05
TPM1-228ENST00000560975 HSPB2A8KAH6 182 aa14.72□□□□□ -0.05
TPM1-228ENST00000560975 SFT2D2O95562 160 aa14.72□□□□□ -0.05
TPM1-228ENST00000560975 CLDN6P56747 220 aa14.72□□□□□ -0.05
TPM1-228ENST00000560975 HSPB2Q16082 182 aa14.72□□□□□ -0.05
TPM1-228ENST00000560975 MIDNQ504T8 468 aa14.72□□□□□ -0.05
TPM1-228ENST00000560975 TSACCQ96A04 125 aaPredicted RBP14.72□□□□□ -0.05
TPM1-228ENST00000560975 OR2M4Q96R27 311 aa14.72□□□□□ -0.05
TPM1-228ENST00000560975 DMRT1Q9Y5R6 373 aa14.72□□□□□ -0.05
TPM1-228ENST00000560975 CHD7Q9P2D1 2997 aa14.72□□□□□ -0.05
TPM1-228ENST00000560975 FGF19O95750 216 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms