RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 BTNL2Q9UIR0 455 aa7.75□□□□□ -1.17
HERC1-210ENST00000560897 HIF3AQ9Y2N7 669 aa7.75□□□□□ -1.17
HERC1-210ENST00000560897 CHST2Q9Y4C5 530 aa7.75□□□□□ -1.17
HERC1-210ENST00000560897 OOEPA6NGQ2 149 aa7.74□□□□□ -1.17
HERC1-210ENST00000560897 DOK2O60496 412 aa7.74□□□□□ -1.17
HERC1-210ENST00000560897 DCTN3O75935 186 aa7.74□□□□□ -1.17
HERC1-210ENST00000560897 GYPAP02724 150 aa7.74□□□□□ -1.17
HERC1-210ENST00000560897 C1QCP02747 245 aa7.74□□□□□ -1.17
HERC1-210ENST00000560897 IL6P05231 212 aa7.74□□□□□ -1.17
HERC1-210ENST00000560897 CST2P09228 141 aa7.74□□□□□ -1.17
HERC1-210ENST00000560897 FPR3P25089 353 aa7.74□□□□□ -1.17
HERC1-210ENST00000560897 LAP3P28838 519 aa7.74□□□□□ -1.17
HERC1-210ENST00000560897 LRRC74AQ0VAA2 488 aa7.74□□□□□ -1.17
HERC1-210ENST00000560897 BLMHQ13867 455 aa7.74□□□□□ -1.17
HERC1-210ENST00000560897 CNN3Q15417 329 aaKnown RBP7.74□□□□□ -1.17
HERC1-210ENST00000560897 MAPRE2Q15555 327 aa7.74□□□□□ -1.17
HERC1-210ENST00000560897 HIST3H3Q16695 136 aa7.74□□□□□ -1.17
HERC1-210ENST00000560897 SPANXN4Q5MJ08 99 aa7.74□□□□□ -1.17
HERC1-210ENST00000560897 FAM27BQ5VT28 67 aa7.74□□□□□ -1.17
HERC1-210ENST00000560897 OGFOD2Q6N063 350 aa7.74□□□□□ -1.17
HERC1-210ENST00000560897 NANOGNBQ7Z5D8 188 aa7.74□□□□□ -1.17
HERC1-210ENST00000560897 SLC30A8Q8IWU4 369 aa7.74□□□□□ -1.17
HERC1-210ENST00000560897 CELF2-AS1Q8N7Q2 184 aa7.74□□□□□ -1.17
HERC1-210ENST00000560897 LINC00482Q8N8I6 264 aa7.74□□□□□ -1.17
HERC1-210ENST00000560897 BCAS4Q8TDM0 211 aa7.74□□□□□ -1.17
HERC1-210ENST00000560897 WIPF2Q8TF74 440 aaPredicted RBP7.74□□□□□ -1.17
HERC1-210ENST00000560897 SLC38A5Q8WUX1 472 aa7.74□□□□□ -1.17
HERC1-210ENST00000560897 TESCQ96BS2 214 aa7.74□□□□□ -1.17
HERC1-210ENST00000560897 RASD2Q96D21 266 aa7.74□□□□□ -1.17
HERC1-210ENST00000560897 DMRTB1Q96MA1 342 aa7.74□□□□□ -1.17
HERC1-210ENST00000560897 OR52B2Q96RD2 323 aa7.74□□□□□ -1.17
HERC1-210ENST00000560897 CITED4Q96RK1 184 aa7.74□□□□□ -1.17
HERC1-210ENST00000560897 ECSITQ9BQ95 431 aa7.74□□□□□ -1.17
HERC1-210ENST00000560897 EBF4Q9BQW3 602 aa7.74□□□□□ -1.17
HERC1-210ENST00000560897 WNT10AQ9GZT5 417 aa7.74□□□□□ -1.17
HERC1-210ENST00000560897 MUC13Q9H3R2 512 aa7.74□□□□□ -1.17
HERC1-210ENST00000560897 ZMAT4Q9H898 229 aa7.74□□□□□ -1.17
HERC1-210ENST00000560897 SMURF2Q9HAU4 748 aa7.74□□□□□ -1.17
HERC1-210ENST00000560897 THUMPD1Q9NXG2 353 aaKnown RBP7.74□□□□□ -1.17
HERC1-210ENST00000560897 ASIC5Q9NY37 505 aa7.74□□□□□ -1.17
HERC1-210ENST00000560897 PTTG3PQ9NZH4 202 aa7.74□□□□□ -1.17
HERC1-210ENST00000560897 SLC13A4Q9UKG4 626 aa7.74□□□□□ -1.17
HERC1-210ENST00000560897 ARL2BPQ9Y2Y0 163 aa7.74□□□□□ -1.17
HERC1-210ENST00000560897 STARD10Q9Y365 291 aa7.74□□□□□ -1.17
HERC1-210ENST00000560897 SF3B6Q9Y3B4 125 aaKnown RBP7.74□□□□□ -1.17
HERC1-210ENST00000560897 LSM4Q9Y4Z0 139 aaKnown RBP7.74□□□□□ -1.17
HERC1-210ENST00000560897 A0A0B4J2E0 115 aa7.73□□□□□ -1.17
HERC1-210ENST00000560897 A0A1B0GX12 115 aa7.73□□□□□ -1.17
HERC1-210ENST00000560897 C12orf71A8MTZ7 269 aa7.73□□□□□ -1.17
HERC1-210ENST00000560897 C5orf58C9J3I9 102 aa7.73□□□□□ -1.17
HERC1-210ENST00000560897 ANGPT2O15123 496 aa7.73□□□□□ -1.17
HERC1-210ENST00000560897 MLNRO43193 412 aa7.73□□□□□ -1.17
HERC1-210ENST00000560897 SYNGR1O43759 233 aa7.73□□□□□ -1.17
HERC1-210ENST00000560897 FMO6PO60774 539 aa7.73□□□□□ -1.17
HERC1-210ENST00000560897 TRMUO75648 421 aaKnown RBP7.73□□□□□ -1.17
HERC1-210ENST00000560897 FAM107AO95990 144 aa7.73□□□□□ -1.17
HERC1-210ENST00000560897 CH25HO95992 272 aa7.73□□□□□ -1.17
HERC1-210ENST00000560897 HLA-DPB1P04440 258 aa7.73□□□□□ -1.17
HERC1-210ENST00000560897 COX5BP10606 129 aa7.73□□□□□ -1.17
HERC1-210ENST00000560897 ACADSP16219 412 aa7.73□□□□□ -1.17
HERC1-210ENST00000560897 RAD23AP54725 363 aa7.73□□□□□ -1.17
HERC1-210ENST00000560897 RGS8P57771 180 aaPredicted RBP7.73□□□□□ -1.17
HERC1-210ENST00000560897 SCRN3Q0VDG4 424 aa7.73□□□□□ -1.17
HERC1-210ENST00000560897 OR1Q1Q15612 314 aa7.73□□□□□ -1.17
HERC1-210ENST00000560897 MAPK11Q15759 364 aa7.73□□□□□ -1.17
HERC1-210ENST00000560897 AGKQ53H12 422 aa7.73□□□□□ -1.17
HERC1-210ENST00000560897 PRAMEF6Q5VXH4 476 aa7.73□□□□□ -1.17
HERC1-210ENST00000560897 CRIP3Q6Q6R5 217 aa7.73□□□□□ -1.17
HERC1-210ENST00000560897 RANBP3LQ86VV4 465 aaPredicted RBP7.73□□□□□ -1.17
HERC1-210ENST00000560897 OR4X2Q8NGF9 303 aa7.73□□□□□ -1.17
HERC1-210ENST00000560897 ISOC1Q96CN7 298 aa7.73□□□□□ -1.17
HERC1-210ENST00000560897 PRR25Q96S07 402 aa7.73□□□□□ -1.17
HERC1-210ENST00000560897 CDCA4Q9BXL8 241 aa7.73□□□□□ -1.17
HERC1-210ENST00000560897 MRPL13Q9BYD1 178 aaKnown RBP7.73□□□□□ -1.17
HERC1-210ENST00000560897 C20orf141Q9NUB4 165 aa7.73□□□□□ -1.17
HERC1-210ENST00000560897 AIG1Q9NVV5 245 aa7.73□□□□□ -1.17
HERC1-210ENST00000560897 TAS2R5Q9NYW4 299 aa7.73□□□□□ -1.17
HERC1-210ENST00000560897 ZIM2Q9NZV7 527 aa7.73□□□□□ -1.17
HERC1-210ENST00000560897 CCDC167Q9P0B6 97 aa7.73□□□□□ -1.17
HERC1-210ENST00000560897 A0A1W2PPL8 197 aa7.72□□□□□ -1.17
HERC1-210ENST00000560897 MEGF11A6BM72 1044 aa7.72□□□□□ -1.17
HERC1-210ENST00000560897 BLOC1S5-TXNDC5H3BN57 136 aa7.72□□□□□ -1.17
HERC1-210ENST00000560897 J3QW42 95 aa7.72□□□□□ -1.17
HERC1-210ENST00000560897 SNX3O60493 162 aa7.72□□□□□ -1.17
HERC1-210ENST00000560897 MSR1P21757 451 aa7.72□□□□□ -1.17
HERC1-210ENST00000560897 PRKAR1BP31321 381 aa7.72□□□□□ -1.17
HERC1-210ENST00000560897 POLR2JP52435 117 aaKnown RBP7.72□□□□□ -1.17
HERC1-210ENST00000560897 ZNF133P52736 654 aaPredicted RBP7.72□□□□□ -1.17
HERC1-210ENST00000560897 DLX1P56177 255 aa7.72□□□□□ -1.17
HERC1-210ENST00000560897 UFM1P61960 85 aa7.72□□□□□ -1.17
HERC1-210ENST00000560897 CBX1P83916 185 aa7.72□□□□□ -1.17
HERC1-210ENST00000560897 ZNF74Q16587 644 aa7.72□□□□□ -1.17
HERC1-210ENST00000560897 CLEC12AQ5QGZ9 265 aa7.72□□□□□ -1.17
HERC1-210ENST00000560897 C6orf10Q5SRN2 563 aa7.72□□□□□ -1.17
HERC1-210ENST00000560897 FBXW12Q6X9E4 464 aa7.72□□□□□ -1.17
HERC1-210ENST00000560897 SLC36A1Q7Z2H8 476 aa7.72□□□□□ -1.17
HERC1-210ENST00000560897 PIGWQ7Z7B1 504 aa7.72□□□□□ -1.17
HERC1-210ENST00000560897 CENPVQ7Z7K6 275 aaPredicted RBP7.72□□□□□ -1.17
HERC1-210ENST00000560897 SYT9Q86SS6 491 aa7.72□□□□□ -1.17
HERC1-210ENST00000560897 MRPL41Q8IXM3 137 aaKnown RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms