RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 SPRY3O43610 288 aa12.97□□□□□ -0.33
SNRPA1-213ENST00000560856 TLX2O43763 284 aaPredicted RBP12.97□□□□□ -0.33
SNRPA1-213ENST00000560856 TIMM8AO60220 97 aaPredicted RBP12.97□□□□□ -0.33
SNRPA1-213ENST00000560856 MT-ND5P03915 603 aa12.97□□□□□ -0.33
SNRPA1-213ENST00000560856 LCATP04180 440 aa12.97□□□□□ -0.33
SNRPA1-213ENST00000560856 CD55P08174 381 aa12.97□□□□□ -0.33
SNRPA1-213ENST00000560856 TACSTD2P09758 323 aa12.97□□□□□ -0.33
SNRPA1-213ENST00000560856 ACHEP22303 614 aa12.97□□□□□ -0.33
SNRPA1-213ENST00000560856 OPRL1P41146 370 aa12.97□□□□□ -0.33
SNRPA1-213ENST00000560856 PRKXP51817 358 aa12.97□□□□□ -0.33
SNRPA1-213ENST00000560856 GK2Q14410 553 aaPredicted RBP12.97□□□□□ -0.33
SNRPA1-213ENST00000560856 TSTQ16762 297 aaKnown RBP12.97□□□□□ -0.33
SNRPA1-213ENST00000560856 TMEM249Q2WGJ8 235 aa12.97□□□□□ -0.33
SNRPA1-213ENST00000560856 SNAI3Q3KNW1 292 aa12.97□□□□□ -0.33
SNRPA1-213ENST00000560856 OR2T2Q6IF00 324 aa12.97□□□□□ -0.33
SNRPA1-213ENST00000560856 DRAM2Q6UX65 266 aa12.97□□□□□ -0.33
SNRPA1-213ENST00000560856 SPATC1Q76KD6 591 aa12.97□□□□□ -0.33
SNRPA1-213ENST00000560856 RHOUQ7L0Q8 258 aa12.97□□□□□ -0.33
SNRPA1-213ENST00000560856 PRSS45Q7RTY3 260 aa12.97□□□□□ -0.33
SNRPA1-213ENST00000560856 TCEANCQ8N8B7 351 aa12.97□□□□□ -0.33
SNRPA1-213ENST00000560856 TMEM163Q8TC26 289 aa12.97□□□□□ -0.33
SNRPA1-213ENST00000560856 COPS4Q9BT78 406 aa12.97□□□□□ -0.33
SNRPA1-213ENST00000560856 CHODLQ9H9P2 273 aa12.97□□□□□ -0.33
SNRPA1-213ENST00000560856 ENOPH1Q9UHY7 261 aa12.97□□□□□ -0.33
SNRPA1-213ENST00000560856 ZDHHC8Q9ULC8 765 aa12.97□□□□□ -0.33
SNRPA1-213ENST00000560856 PLSCR5A0PG75 271 aa12.96□□□□□ -0.33
SNRPA1-213ENST00000560856 IQCF6A8MYZ5 107 aa12.96□□□□□ -0.33
SNRPA1-213ENST00000560856 EI24O14681 340 aa12.96□□□□□ -0.33
SNRPA1-213ENST00000560856 ALOX5APP20292 161 aa12.96□□□□□ -0.33
SNRPA1-213ENST00000560856 NAA10P41227 235 aaPredicted RBP12.96□□□□□ -0.33
SNRPA1-213ENST00000560856 CRYBB2P43320 205 aa12.96□□□□□ -0.33
SNRPA1-213ENST00000560856 HCCSP53701 268 aa12.96□□□□□ -0.33
SNRPA1-213ENST00000560856 PRSS12P56730 875 aa12.96□□□□□ -0.33
SNRPA1-213ENST00000560856 TMEM33P57088 247 aa12.96□□□□□ -0.33
SNRPA1-213ENST00000560856 PQLC1Q8N2U9 271 aa12.96□□□□□ -0.33
SNRPA1-213ENST00000560856 ZNF454Q8N9F8 522 aa12.96□□□□□ -0.33
SNRPA1-213ENST00000560856 ZNF540Q8NDQ6 660 aa12.96□□□□□ -0.33
SNRPA1-213ENST00000560856 IL4I1Q96RQ9 567 aa12.96□□□□□ -0.33
SNRPA1-213ENST00000560856 SLC29A1Q99808 456 aa12.96□□□□□ -0.33
SNRPA1-213ENST00000560856 RIBC2Q9H4K1 309 aa12.96□□□□□ -0.33
SNRPA1-213ENST00000560856 ZNF275Q9NSD4 429 aaPredicted RBP12.96□□□□□ -0.33
SNRPA1-213ENST00000560856 CACNG2Q9Y698 323 aa12.96□□□□□ -0.33
SNRPA1-213ENST00000560856 ABCA2Q9BZC7 2435 aa12.96□□□□□ -0.34
SNRPA1-213ENST00000560856 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.95□□□□□ -0.341e-11■■■■■ 39.6
SNRPA1-213ENST00000560856 CD5LO43866 347 aa12.95□□□□□ -0.34
SNRPA1-213ENST00000560856 CDC14BO60729 498 aa12.95□□□□□ -0.34
SNRPA1-213ENST00000560856 SLC2A1P11166 492 aa12.95□□□□□ -0.34
SNRPA1-213ENST00000560856 ALDH3A2P51648 485 aa12.95□□□□□ -0.34
SNRPA1-213ENST00000560856 RPS7P62081 194 aaKnown RBP12.95□□□□□ -0.34
SNRPA1-213ENST00000560856 GRB2P62993 217 aaKnown RBP12.95□□□□□ -0.34
SNRPA1-213ENST00000560856 ZNF92Q03936 586 aa12.95□□□□□ -0.34
SNRPA1-213ENST00000560856 GGTLC2Q14390 218 aa12.95□□□□□ -0.34
SNRPA1-213ENST00000560856 TRIP10Q15642 601 aa12.95□□□□□ -0.34
SNRPA1-213ENST00000560856 NXNL2Q5VZ03 156 aa12.95□□□□□ -0.34
SNRPA1-213ENST00000560856 USP51Q70EK9 711 aa12.95□□□□□ -0.34
SNRPA1-213ENST00000560856 MEPCEQ7L2J0 689 aaKnown RBP12.95□□□□□ -0.34
SNRPA1-213ENST00000560856 SLC16A9Q7RTY1 509 aa12.95□□□□□ -0.34
SNRPA1-213ENST00000560856 OR5AS1Q8N127 324 aa12.95□□□□□ -0.34
SNRPA1-213ENST00000560856 CBR4Q8N4T8 237 aa12.95□□□□□ -0.34
SNRPA1-213ENST00000560856 OR8G5Q8NG78 346 aa12.95□□□□□ -0.34
SNRPA1-213ENST00000560856 DIRC2Q96SL1 478 aa12.95□□□□□ -0.34
SNRPA1-213ENST00000560856 REPIN1Q9BWE0 567 aaKnown RBP12.95□□□□□ -0.34
SNRPA1-213ENST00000560856 PRRG3Q9BZD7 231 aa12.95□□□□□ -0.34
SNRPA1-213ENST00000560856 YIPF3Q9GZM5 350 aa12.95□□□□□ -0.34
SNRPA1-213ENST00000560856 TOR3AQ9H497 397 aa12.95□□□□□ -0.34
SNRPA1-213ENST00000560856 MALRD1Q5VYJ5 2156 aa12.95□□□□□ -0.34
SNRPA1-213ENST00000560856 IGHV1-69-2A0A0G2JMI3 117 aa12.94□□□□□ -0.34
SNRPA1-213ENST00000560856 LRP5LA4QPB2 252 aa12.94□□□□□ -0.34
SNRPA1-213ENST00000560856 PRR32B1ATL7 298 aa12.94□□□□□ -0.34
SNRPA1-213ENST00000560856 WNT9BO14905 357 aa12.94□□□□□ -0.34
SNRPA1-213ENST00000560856 LYNP07948 512 aa12.94□□□□□ -0.34
SNRPA1-213ENST00000560856 IGHV4-31P0DP07 118 aa12.94□□□□□ -0.34
SNRPA1-213ENST00000560856 SLC15A1P46059 708 aa12.94□□□□□ -0.34
SNRPA1-213ENST00000560856 SLC6A9P48067 706 aa12.94□□□□□ -0.34
SNRPA1-213ENST00000560856 HNRNPA0Q13151 305 aaKnown RBP12.94□□□□□ -0.34
SNRPA1-213ENST00000560856 TAF13Q15543 124 aa12.94□□□□□ -0.34
SNRPA1-213ENST00000560856 ZMAT1Q5H9K5 638 aa12.94□□□□□ -0.34
SNRPA1-213ENST00000560856 GLYATL3Q5SZD4 288 aa12.94□□□□□ -0.34
SNRPA1-213ENST00000560856 ZNF283Q8N7M2 679 aa12.94□□□□□ -0.34
SNRPA1-213ENST00000560856 OR2AE1Q8NHA4 323 aa12.94□□□□□ -0.34
SNRPA1-213ENST00000560856 SPSB4Q96A44 273 aa12.94□□□□□ -0.34
SNRPA1-213ENST00000560856 SLC30A2Q9BRI3 323 aa12.94□□□□□ -0.34
SNRPA1-213ENST00000560856 SOX7Q9BT81 388 aa12.94□□□□□ -0.34
SNRPA1-213ENST00000560856 SAP30LQ9HAJ7 183 aa12.94□□□□□ -0.34
SNRPA1-213ENST00000560856 DECR2Q9NUI1 292 aa12.94□□□□□ -0.34
SNRPA1-213ENST00000560856 ZNF319Q9P2F9 582 aa12.94□□□□□ -0.34
SNRPA1-213ENST00000560856 COPS3Q9UNS2 423 aa12.94□□□□□ -0.34
SNRPA1-213ENST00000560856 MLNRO43193 412 aa12.93□□□□□ -0.34
SNRPA1-213ENST00000560856 MRPL3P09001 348 aaKnown RBP12.93□□□□□ -0.34
SNRPA1-213ENST00000560856 HOXB4P17483 251 aaPredicted RBP12.93□□□□□ -0.34
SNRPA1-213ENST00000560856 IL2RGP31785 369 aa12.93□□□□□ -0.34
SNRPA1-213ENST00000560856 GPR6P46095 362 aaPredicted RBP12.93□□□□□ -0.34
SNRPA1-213ENST00000560856 CX3CR1P49238 355 aa12.93□□□□□ -0.34
SNRPA1-213ENST00000560856 TNFAIP6P98066 277 aaPredicted RBP12.93□□□□□ -0.34
SNRPA1-213ENST00000560856 MALLQ13021 153 aa12.93□□□□□ -0.34
SNRPA1-213ENST00000560856 LCN1P1Q5VSP4 162 aa12.93□□□□□ -0.34
SNRPA1-213ENST00000560856 PGAP1Q75T13 922 aa12.93□□□□□ -0.34
SNRPA1-213ENST00000560856 OR2Z1Q8NG97 314 aa12.93□□□□□ -0.34
SNRPA1-213ENST00000560856 OR13G1Q8NGZ3 307 aa12.93□□□□□ -0.34
SNRPA1-213ENST00000560856 THEM6Q8WUY1 208 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms