RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 PPIDQ08752 370 aaKnown RBP1.97□□□□□ -2.09
PSMA4-221ENST00000560842 SRSF5Q13243 272 aaKnown RBP1.97□□□□□ -2.09
PSMA4-221ENST00000560842 TRAM2Q15035 370 aa1.97□□□□□ -2.09
PSMA4-221ENST00000560842 TAF9Q16594 264 aa1.97□□□□□ -2.09
PSMA4-221ENST00000560842 HSDL1Q3SXM5 330 aa1.97□□□□□ -2.09
PSMA4-221ENST00000560842 YIF1BQ5BJH7 314 aa1.97□□□□□ -2.09
PSMA4-221ENST00000560842 OR6Q1Q8NGQ2 317 aa1.97□□□□□ -2.09
PSMA4-221ENST00000560842 APH1BQ8WW43 257 aa1.97□□□□□ -2.09
PSMA4-221ENST00000560842 CAPSLQ8WWF8 208 aa1.97□□□□□ -2.09
PSMA4-221ENST00000560842 NRBF2Q96F24 287 aa1.97□□□□□ -2.09
PSMA4-221ENST00000560842 RHBDL2Q9NX52 303 aa1.97□□□□□ -2.09
PSMA4-221ENST00000560842 C21orf62Q9NYP8 219 aa1.97□□□□□ -2.09
PSMA4-221ENST00000560842 SLC17A7Q9P2U7 560 aa1.97□□□□□ -2.09
PSMA4-221ENST00000560842 DHCR7Q9UBM7 475 aaKnown RBP1.97□□□□□ -2.09
PSMA4-221ENST00000560842 SIGLEC7Q9Y286 467 aa1.97□□□□□ -2.09
PSMA4-221ENST00000560842 ANKRD12Q6UB98 2062 aa1.97□□□□□ -2.09
PSMA4-221ENST00000560842 IGHV3-49A0A0A0MS15 119 aa1.96□□□□□ -2.1
PSMA4-221ENST00000560842 IGHV1-3A0A0C4DH29 117 aa1.96□□□□□ -2.1
PSMA4-221ENST00000560842 SMCO3A2RU48 225 aa1.96□□□□□ -2.1
PSMA4-221ENST00000560842 GOLGA8OA6NCC3 632 aa1.96□□□□□ -2.1
PSMA4-221ENST00000560842 SMCO2A6NFE2 343 aa1.96□□□□□ -2.1
PSMA4-221ENST00000560842 GOLGA8NF8WBI6 632 aa1.96□□□□□ -2.1
PSMA4-221ENST00000560842 PLPP1O14494 284 aa1.96□□□□□ -2.1
PSMA4-221ENST00000560842 CDC40O60508 579 aaKnown RBP eCLIP1.96□□□□□ -2.1
PSMA4-221ENST00000560842 OR2F2O95006 317 aa1.96□□□□□ -2.1
PSMA4-221ENST00000560842 OR1E1P30953 314 aa1.96□□□□□ -2.1
PSMA4-221ENST00000560842 POLR2IP36954 125 aaKnown RBP1.96□□□□□ -2.1
PSMA4-221ENST00000560842 GDI2P50395 445 aaKnown RBP1.96□□□□□ -2.1
PSMA4-221ENST00000560842 CRISP1P54107 249 aa1.96□□□□□ -2.1
PSMA4-221ENST00000560842 PRMT2P55345 433 aa1.96□□□□□ -2.1
PSMA4-221ENST00000560842 ZNF121P58317 390 aaPredicted RBP1.96□□□□□ -2.1
PSMA4-221ENST00000560842 EIF3EP60228 445 aaKnown RBP1.96□□□□□ -2.1
PSMA4-221ENST00000560842 PNOCQ13519 176 aa1.96□□□□□ -2.1
PSMA4-221ENST00000560842 PSMD5Q16401 504 aa1.96□□□□□ -2.1
PSMA4-221ENST00000560842 C16orf47Q6ZP98 133 aaPredicted RBP1.96□□□□□ -2.1
PSMA4-221ENST00000560842 MRPL55Q7Z7F7 128 aaKnown RBP1.96□□□□□ -2.1
PSMA4-221ENST00000560842 FAM71AQ8IYT1 594 aa1.96□□□□□ -2.1
PSMA4-221ENST00000560842 CBR4Q8N4T8 237 aa1.96□□□□□ -2.1
PSMA4-221ENST00000560842 OR1P1Q8NH06 330 aa1.96□□□□□ -2.1
PSMA4-221ENST00000560842 OR5K2Q8NHB8 316 aa1.96□□□□□ -2.1
PSMA4-221ENST00000560842 LYPD6BQ8NI32 183 aa1.96□□□□□ -2.1
PSMA4-221ENST00000560842 BTN2A3PQ96KV6 586 aa1.96□□□□□ -2.1
PSMA4-221ENST00000560842 ANKRA2Q9H9E1 313 aa1.96□□□□□ -2.1
PSMA4-221ENST00000560842 HPCAL4Q9UM19 191 aa1.96□□□□□ -2.1
PSMA4-221ENST00000560842 PCDH11XQ9BZA7 1347 aa1.95□□□□□ -2.1
PSMA4-221ENST00000560842 A0A1B0GW55 424 aa1.95□□□□□ -2.1
PSMA4-221ENST00000560842 H7C1H1 209 aa1.95□□□□□ -2.1
PSMA4-221ENST00000560842 RNF13O43567 381 aa1.95□□□□□ -2.1
PSMA4-221ENST00000560842 PLIN3O60664 434 aa1.95□□□□□ -2.1
PSMA4-221ENST00000560842 FTH1P02794 183 aa1.95□□□□□ -2.1
PSMA4-221ENST00000560842 DUX4L2P0CJ85 424 aa1.95□□□□□ -2.1
PSMA4-221ENST00000560842 DUX4L3P0CJ86 424 aa1.95□□□□□ -2.1
PSMA4-221ENST00000560842 DUX4L5P0CJ88 424 aa1.95□□□□□ -2.1
PSMA4-221ENST00000560842 DUX4L6P0CJ89 424 aa1.95□□□□□ -2.1
PSMA4-221ENST00000560842 DUX4L7P0CJ90 424 aa1.95□□□□□ -2.1
PSMA4-221ENST00000560842 CD37P11049 281 aa1.95□□□□□ -2.1
PSMA4-221ENST00000560842 SYKP43405 635 aa1.95□□□□□ -2.1
PSMA4-221ENST00000560842 KRTAP12-4P60329 112 aa1.95□□□□□ -2.1
PSMA4-221ENST00000560842 IDI1Q13907 227 aa1.95□□□□□ -2.1
PSMA4-221ENST00000560842 DGCR6Q14129 220 aa1.95□□□□□ -2.1
PSMA4-221ENST00000560842 SCD5Q86SK9 330 aa1.95□□□□□ -2.1
PSMA4-221ENST00000560842 CSGALNACT2Q8N6G5 542 aa1.95□□□□□ -2.1
PSMA4-221ENST00000560842 C1orf64Q8NEQ6 169 aa1.95□□□□□ -2.1
PSMA4-221ENST00000560842 OR5T1Q8NG75 326 aa1.95□□□□□ -2.1
PSMA4-221ENST00000560842 ZCCHC13Q8WW36 166 aaKnown RBP1.95□□□□□ -2.1
PSMA4-221ENST00000560842 TVP23CQ96ET8 276 aa1.95□□□□□ -2.1
PSMA4-221ENST00000560842 ZNF317Q96PQ6 595 aaPredicted RBP1.95□□□□□ -2.1
PSMA4-221ENST00000560842 ZNF442Q9H7R0 627 aa1.95□□□□□ -2.1
PSMA4-221ENST00000560842 DUX4Q9UBX2 424 aa1.95□□□□□ -2.1
PSMA4-221ENST00000560842 PITPNC1Q9UKF7 332 aa1.95□□□□□ -2.1
PSMA4-221ENST00000560842 CARHSP1Q9Y2V2 147 aaKnown RBP1.95□□□□□ -2.1
PSMA4-221ENST00000560842 SMIM26A0A096LP01 95 aa1.94□□□□□ -2.1
PSMA4-221ENST00000560842 POLR1CO15160 346 aaPredicted RBP1.94□□□□□ -2.1
PSMA4-221ENST00000560842 EIF3HO15372 352 aaKnown RBP eCLIP1.94□□□□□ -2.1
PSMA4-221ENST00000560842 HPRT1P00492 218 aa1.94□□□□□ -2.1
PSMA4-221ENST00000560842 IL32P24001 234 aa1.94□□□□□ -2.1
PSMA4-221ENST00000560842 MRPL19P49406 292 aaKnown RBP1.94□□□□□ -2.1
PSMA4-221ENST00000560842 FAM53BQ14153 422 aa1.94□□□□□ -2.1
PSMA4-221ENST00000560842 MAD2L1BPQ15013 274 aaPredicted RBP1.94□□□□□ -2.1
PSMA4-221ENST00000560842 NCF4Q15080 339 aa1.94□□□□□ -2.1
PSMA4-221ENST00000560842 TPTE2P1Q5T6R2 138 aa1.94□□□□□ -2.1
PSMA4-221ENST00000560842 ARMC12Q5T9G4 340 aa1.94□□□□□ -2.1
PSMA4-221ENST00000560842 LRRC66Q68CR7 880 aa1.94□□□□□ -2.1
PSMA4-221ENST00000560842 TTC23LQ6PF05 361 aa1.94□□□□□ -2.1
PSMA4-221ENST00000560842 CASP12Q6UXS9 341 aa1.94□□□□□ -2.1
PSMA4-221ENST00000560842 ZYG11AQ6WRX3 759 aa1.94□□□□□ -2.1
PSMA4-221ENST00000560842 LRP11Q86VZ4 500 aa1.94□□□□□ -2.1
PSMA4-221ENST00000560842 ZNF547Q8IVP9 402 aa1.94□□□□□ -2.1
PSMA4-221ENST00000560842 WDR34Q96EX3 536 aa1.94□□□□□ -2.1
PSMA4-221ENST00000560842 C18orf15Q96N68 181 aa1.94□□□□□ -2.1
PSMA4-221ENST00000560842 DHX35Q9H5Z1 703 aaKnown RBP1.94□□□□□ -2.1
PSMA4-221ENST00000560842 NEK6Q9HC98 313 aa1.94□□□□□ -2.1
PSMA4-221ENST00000560842 MYOZ1Q9NP98 299 aaPredicted RBP1.94□□□□□ -2.1
PSMA4-221ENST00000560842 ZSWIM8A7E2V4 1837 aa1.94□□□□□ -2.1
PSMA4-221ENST00000560842 IGKV1-27A0A075B6S5 117 aa1.93□□□□□ -2.1
PSMA4-221ENST00000560842 IGKV2-24A0A0C4DH68 120 aa1.93□□□□□ -2.1
PSMA4-221ENST00000560842 NDUFC2-KCTD14E9PQ53 114 aa1.93□□□□□ -2.1
PSMA4-221ENST00000560842 H7C0C1 242 aa1.93□□□□□ -2.1
PSMA4-221ENST00000560842 CHMP2AO43633 222 aa1.93□□□□□ -2.1
PSMA4-221ENST00000560842 HUS1O60921 280 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms