RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 SLC15A1P46059 708 aa11.87□□□□□ -0.51
TPM1-223ENST00000560445 SLC6A9P48067 706 aa11.87□□□□□ -0.51
TPM1-223ENST00000560445 TAF13Q15543 124 aa11.87□□□□□ -0.51
TPM1-223ENST00000560445 SNCBQ16143 134 aa11.87□□□□□ -0.51
TPM1-223ENST00000560445 MEP1BQ16820 701 aa11.87□□□□□ -0.51
TPM1-223ENST00000560445 CLEC12AQ5QGZ9 265 aa11.87□□□□□ -0.51
TPM1-223ENST00000560445 LCN8Q6JVE9 175 aa11.87□□□□□ -0.51
TPM1-223ENST00000560445 CORO6Q6QEF8 472 aa11.87□□□□□ -0.51
TPM1-223ENST00000560445 DRAM2Q6UX65 266 aa11.87□□□□□ -0.51
TPM1-223ENST00000560445 KLBQ86Z14 1044 aa11.87□□□□□ -0.51
TPM1-223ENST00000560445 SPERTQ8NA61 448 aa11.87□□□□□ -0.51
TPM1-223ENST00000560445 SEMA6DQ8NFY4 1073 aa11.87□□□□□ -0.51
TPM1-223ENST00000560445 ZNF799Q96GE5 643 aa11.87□□□□□ -0.51
TPM1-223ENST00000560445 POFUT1Q9H488 388 aa11.87□□□□□ -0.51
TPM1-223ENST00000560445 DDX28Q9NUL7 540 aaKnown RBP11.87□□□□□ -0.51
TPM1-223ENST00000560445 AUP1Q9Y679 476 aa11.87□□□□□ -0.51
TPM1-223ENST00000560445 DCTN6O00399 190 aa11.86□□□□□ -0.51
TPM1-223ENST00000560445 PPIAL4GP0DN37 164 aa11.86□□□□□ -0.51
TPM1-223ENST00000560445 RPS2P15880 293 aaKnown RBP11.86□□□□□ -0.51
TPM1-223ENST00000560445 PAICSP22234 425 aaKnown RBP11.86□□□□□ -0.51
TPM1-223ENST00000560445 GGT2P36268 569 aa11.86□□□□□ -0.51
TPM1-223ENST00000560445 GATA4P43694 442 aa11.86□□□□□ -0.51
TPM1-223ENST00000560445 TRIM25Q14258 630 aaKnown RBP11.86□□□□□ -0.51
TPM1-223ENST00000560445 HLXQ14774 488 aaPredicted RBP11.86□□□□□ -0.51
TPM1-223ENST00000560445 ZMYND11Q15326 602 aa11.86□□□□□ -0.51
TPM1-223ENST00000560445 KRTAP27-1Q3LI81 207 aa11.86□□□□□ -0.51
TPM1-223ENST00000560445 SLC35F1Q5T1Q4 408 aa11.86□□□□□ -0.51
TPM1-223ENST00000560445 OR2T5Q6IEZ7 315 aa11.86□□□□□ -0.51
TPM1-223ENST00000560445 LRRN1Q6UXK5 716 aa11.86□□□□□ -0.51
TPM1-223ENST00000560445 CFAP77Q6ZQR2 320 aa11.86□□□□□ -0.51
TPM1-223ENST00000560445 LINC00346Q8IVM7 164 aa11.86□□□□□ -0.51
TPM1-223ENST00000560445 LNX2Q8N448 690 aa11.86□□□□□ -0.51
TPM1-223ENST00000560445 AQP11Q8NBQ7 271 aa11.86□□□□□ -0.51
TPM1-223ENST00000560445 PLPP7Q8NBV4 271 aa11.86□□□□□ -0.51
TPM1-223ENST00000560445 BHLHE23Q8NDY6 225 aa11.86□□□□□ -0.51
TPM1-223ENST00000560445 OR10AD1Q8NGE0 317 aa11.86□□□□□ -0.51
TPM1-223ENST00000560445 OR8B3Q8NGG8 313 aa11.86□□□□□ -0.51
TPM1-223ENST00000560445 OR2T29Q8NH02 315 aa11.86□□□□□ -0.51
TPM1-223ENST00000560445 TEX47Q8TBZ9 253 aa11.86□□□□□ -0.51
TPM1-223ENST00000560445 NEIL1Q96FI4 390 aaPredicted RBP11.86□□□□□ -0.51
TPM1-223ENST00000560445 OR8B2Q96RD0 313 aa11.86□□□□□ -0.51
TPM1-223ENST00000560445 COPS4Q9BT78 406 aa11.86□□□□□ -0.51
TPM1-223ENST00000560445 SSBP3Q9BWW4 388 aaPredicted RBP11.86□□□□□ -0.51
TPM1-223ENST00000560445 TEX12Q9BXU0 123 aa11.86□□□□□ -0.51
TPM1-223ENST00000560445 KIF17Q9P2E2 1029 aa11.86□□□□□ -0.51
TPM1-223ENST00000560445 SAMHD1Q9Y3Z3 626 aaKnown RBP11.86□□□□□ -0.51
TPM1-223ENST00000560445 A0A1B0GWJ7 208 aa11.85□□□□□ -0.51
TPM1-223ENST00000560445 ZNF878C9JN71 531 aa11.85□□□□□ -0.51
TPM1-223ENST00000560445 F5H0A9 414 aaPredicted RBP11.85□□□□□ -0.51
TPM1-223ENST00000560445 BHLHE40O14503 412 aa11.85□□□□□ -0.51
TPM1-223ENST00000560445 GMDSO60547 372 aa11.85□□□□□ -0.51
TPM1-223ENST00000560445 RAP2AP10114 183 aa11.85□□□□□ -0.51
TPM1-223ENST00000560445 ZNF12P17014 697 aa11.85□□□□□ -0.51
TPM1-223ENST00000560445 CFL1P23528 166 aaKnown RBP11.85□□□□□ -0.51
TPM1-223ENST00000560445 ENTPD1P49961 510 aa11.85□□□□□ -0.51
TPM1-223ENST00000560445 SLC25A1P53007 311 aa11.85□□□□□ -0.51
TPM1-223ENST00000560445 GNB2P62879 340 aa11.85□□□□□ -0.51
TPM1-223ENST00000560445 GRB2P62993 217 aaKnown RBP11.85□□□□□ -0.51
TPM1-223ENST00000560445 GK2Q14410 553 aaPredicted RBP11.85□□□□□ -0.51
TPM1-223ENST00000560445 ZNF771Q7L3S4 317 aaPredicted RBP11.85□□□□□ -0.51
TPM1-223ENST00000560445 FTMTQ8N4E7 242 aa11.85□□□□□ -0.51
TPM1-223ENST00000560445 GCDHQ92947 438 aaPredicted RBP11.85□□□□□ -0.51
TPM1-223ENST00000560445 ASB9Q96DX5 294 aa11.85□□□□□ -0.51
TPM1-223ENST00000560445 SIGLEC11Q96RL6 698 aa11.85□□□□□ -0.51
TPM1-223ENST00000560445 DGCR6LQ9BY27 220 aa11.85□□□□□ -0.51
TPM1-223ENST00000560445 TOR3AQ9H497 397 aa11.85□□□□□ -0.51
TPM1-223ENST00000560445 EGLN3Q9H6Z9 239 aa11.85□□□□□ -0.51
TPM1-223ENST00000560445 YY1AP1Q9H869 796 aa11.85□□□□□ -0.51
TPM1-223ENST00000560445 FN3KRPQ9HA64 309 aa11.85□□□□□ -0.51
TPM1-223ENST00000560445 MRPL15Q9P015 296 aaKnown RBP11.85□□□□□ -0.51
TPM1-223ENST00000560445 NUP50Q9UKX7 468 aa11.85□□□□□ -0.51
TPM1-223ENST00000560445 SVEP1Q4LDE5 3571 aa11.84□□□□□ -0.51
TPM1-223ENST00000560445 ARRDC5A6NEK1 342 aa11.84□□□□□ -0.51
TPM1-223ENST00000560445 GGT3PA6NGU5 568 aa11.84□□□□□ -0.51
TPM1-223ENST00000560445 CEACAM18A8MTB9 384 aa11.84□□□□□ -0.51
TPM1-223ENST00000560445 XRCC2O43543 280 aa11.84□□□□□ -0.51
TPM1-223ENST00000560445 VENTXO95231 258 aa11.84□□□□□ -0.51
TPM1-223ENST00000560445 SPARCP09486 303 aa11.84□□□□□ -0.51
TPM1-223ENST00000560445 DDOSTP39656 456 aa11.84□□□□□ -0.51
TPM1-223ENST00000560445 CD200P41217 278 aa11.84□□□□□ -0.51
TPM1-223ENST00000560445 NPY4RP50391 375 aa11.84□□□□□ -0.51
TPM1-223ENST00000560445 ZNF154Q13106 437 aa11.84□□□□□ -0.51
TPM1-223ENST00000560445 OR8G1Q15617 311 aa11.84□□□□□ -0.51
TPM1-223ENST00000560445 MICAQ29983 383 aa11.84□□□□□ -0.51
TPM1-223ENST00000560445 TEX30Q5JUR7 227 aa11.84□□□□□ -0.51
TPM1-223ENST00000560445 CD300LDQ6UXZ3 194 aa11.84□□□□□ -0.51
TPM1-223ENST00000560445 DCDC5Q6ZRR9 648 aa11.84□□□□□ -0.51
TPM1-223ENST00000560445 MOGAT3Q86VF5 341 aa11.84□□□□□ -0.51
TPM1-223ENST00000560445 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.84□□□□□ -0.51
TPM1-223ENST00000560445 OR9Q2Q8NGE9 314 aa11.84□□□□□ -0.51
TPM1-223ENST00000560445 Q8TCH9 128 aa11.84□□□□□ -0.51
TPM1-223ENST00000560445 BTBD10Q9BSF8 475 aa11.84□□□□□ -0.51
TPM1-223ENST00000560445 TSSK6Q9BXA6 273 aa11.84□□□□□ -0.51
TPM1-223ENST00000560445 C1orf21Q9H246 121 aa11.84□□□□□ -0.51
TPM1-223ENST00000560445 FN3KQ9H479 309 aa11.84□□□□□ -0.51
TPM1-223ENST00000560445 ZNF556Q9HAH1 456 aa11.84□□□□□ -0.51
TPM1-223ENST00000560445 C14orf119Q9NWQ9 140 aa11.84□□□□□ -0.51
TPM1-223ENST00000560445 PPIAL4AQ9Y536 164 aa11.84□□□□□ -0.51
TPM1-223ENST00000560445 INSIG2Q9Y5U4 225 aa11.84□□□□□ -0.51
TPM1-223ENST00000560445 COMMD3-BMI1R4GMX3 469 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms