RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 POLE4Q9NR33 117 aa10.53□□□□□ -0.72
RABGGTA-213ENST00000560127 C20orf141Q9NUB4 165 aa10.53□□□□□ -0.72
RABGGTA-213ENST00000560127 PTTG3PQ9NZH4 202 aa10.53□□□□□ -0.72
RABGGTA-213ENST00000560127 ERVK-18Q9QC07 812 aa10.53□□□□□ -0.72
RABGGTA-213ENST00000560127 A0A1B0GWJ7 208 aa10.52□□□□□ -0.73
RABGGTA-213ENST00000560127 ANKRD61A6NGH8 418 aa10.52□□□□□ -0.73
RABGGTA-213ENST00000560127 RNASEK-C17orf49H0YIS7 233 aa10.52□□□□□ -0.73
RABGGTA-213ENST00000560127 FAM20BO75063 409 aa10.52□□□□□ -0.73
RABGGTA-213ENST00000560127 FAM107AO95990 144 aa10.52□□□□□ -0.73
RABGGTA-213ENST00000560127 MT-ND1P03886 318 aa10.52□□□□□ -0.73
RABGGTA-213ENST00000560127 HLA-DPB1P04440 258 aa10.52□□□□□ -0.73
RABGGTA-213ENST00000560127 FBP1P09467 338 aa10.52□□□□□ -0.73
RABGGTA-213ENST00000560127 IRF2P14316 349 aa10.52□□□□□ -0.73
RABGGTA-213ENST00000560127 GUCA1AP43080 201 aaPredicted RBP10.52□□□□□ -0.73
RABGGTA-213ENST00000560127 LIPEQ05469 1076 aa10.52□□□□□ -0.73
RABGGTA-213ENST00000560127 MAB21L1Q13394 359 aa10.52□□□□□ -0.73
RABGGTA-213ENST00000560127 TOP3AQ13472 1001 aaPredicted RBP10.52□□□□□ -0.73
RABGGTA-213ENST00000560127 LAPTM4AQ15012 233 aa10.52□□□□□ -0.73
RABGGTA-213ENST00000560127 PATL1Q86TB9 770 aaKnown RBP10.52□□□□□ -0.73
RABGGTA-213ENST00000560127 KLHDC1Q8N7A1 406 aa10.52□□□□□ -0.73
RABGGTA-213ENST00000560127 PPP1R35Q8TAP8 253 aa10.52□□□□□ -0.73
RABGGTA-213ENST00000560127 ZNF582Q96NG8 517 aaPredicted RBP10.52□□□□□ -0.73
RABGGTA-213ENST00000560127 ECSITQ9BQ95 431 aa10.52□□□□□ -0.73
RABGGTA-213ENST00000560127 PCDHAC1Q9H158 963 aa10.52□□□□□ -0.73
RABGGTA-213ENST00000560127 GID8Q9NWU2 228 aa10.52□□□□□ -0.73
RABGGTA-213ENST00000560127 DNAH1Q9P2D7 4330 aa10.52□□□□□ -0.73
RABGGTA-213ENST00000560127 ADAM20O43506 726 aa10.51□□□□□ -0.73
RABGGTA-213ENST00000560127 SGCEO43556 437 aa10.51□□□□□ -0.73
RABGGTA-213ENST00000560127 OR10H3O60404 316 aa10.51□□□□□ -0.73
RABGGTA-213ENST00000560127 RAD23AP54725 363 aa10.51□□□□□ -0.73
RABGGTA-213ENST00000560127 PSME3P61289 254 aa10.51□□□□□ -0.73
RABGGTA-213ENST00000560127 SCRN3Q0VDG4 424 aa10.51□□□□□ -0.73
RABGGTA-213ENST00000560127 SFRP4Q6FHJ7 346 aaPredicted RBP10.51□□□□□ -0.73
RABGGTA-213ENST00000560127 VMO1Q7Z5L0 202 aa10.51□□□□□ -0.73
RABGGTA-213ENST00000560127 TSEN54Q7Z6J9 526 aaKnown RBP10.51□□□□□ -0.73
RABGGTA-213ENST00000560127 IGFN1Q86VF2 1251 aa10.51□□□□□ -0.73
RABGGTA-213ENST00000560127 BHLHE23Q8NDY6 225 aa10.51□□□□□ -0.73
RABGGTA-213ENST00000560127 OR2T12Q8NG77 320 aa10.51□□□□□ -0.73
RABGGTA-213ENST00000560127 LIPHQ8WWY8 451 aa10.51□□□□□ -0.73
RABGGTA-213ENST00000560127 SGTBQ96EQ0 304 aa10.51□□□□□ -0.73
RABGGTA-213ENST00000560127 SH3GL1Q99961 368 aa10.51□□□□□ -0.73
RABGGTA-213ENST00000560127 WACQ9BTA9 647 aa10.51□□□□□ -0.73
RABGGTA-213ENST00000560127 MMP28Q9H239 520 aa10.51□□□□□ -0.73
RABGGTA-213ENST00000560127 EFCAB1Q9HAE3 211 aa10.51□□□□□ -0.73
RABGGTA-213ENST00000560127 ELOVL7A1L3X0 281 aa10.5□□□□□ -0.73
RABGGTA-213ENST00000560127 OR6C6A6NF89 314 aa10.5□□□□□ -0.73
RABGGTA-213ENST00000560127 IQCF6A8MYZ5 107 aa10.5□□□□□ -0.73
RABGGTA-213ENST00000560127 LGALS8O00214 317 aa10.5□□□□□ -0.73
RABGGTA-213ENST00000560127 DBHP09172 617 aa10.5□□□□□ -0.73
RABGGTA-213ENST00000560127 T-ENOLP0DO92 83 aa10.5□□□□□ -0.73
RABGGTA-213ENST00000560127 KDELR2P33947 212 aa10.5□□□□□ -0.73
RABGGTA-213ENST00000560127 KIR2DS4P43632 304 aa10.5□□□□□ -0.73
RABGGTA-213ENST00000560127 RPL27P61353 136 aaKnown RBP10.5□□□□□ -0.73
RABGGTA-213ENST00000560127 PRB3Q04118 309 aaPredicted RBP10.5□□□□□ -0.73
RABGGTA-213ENST00000560127 MPPED2Q15777 294 aa10.5□□□□□ -0.73
RABGGTA-213ENST00000560127 NSUN5P1Q3KNT7 163 aa10.5□□□□□ -0.73
RABGGTA-213ENST00000560127 CDONQ4KMG0 1287 aa10.5□□□□□ -0.73
RABGGTA-213ENST00000560127 CYBRD1Q53TN4 286 aa10.5□□□□□ -0.73
RABGGTA-213ENST00000560127 PRAMEF6Q5VXH4 476 aa10.5□□□□□ -0.73
RABGGTA-213ENST00000560127 ERICH5Q6P6B1 374 aa10.5□□□□□ -0.73
RABGGTA-213ENST00000560127 C11orf88Q6PI97 169 aa10.5□□□□□ -0.73
RABGGTA-213ENST00000560127 BTN2A1Q7KYR7 527 aa10.5□□□□□ -0.73
RABGGTA-213ENST00000560127 ARPINQ7Z6K5 226 aa10.5□□□□□ -0.73
RABGGTA-213ENST00000560127 NKAIN4Q8IVV8 208 aa10.5□□□□□ -0.73
RABGGTA-213ENST00000560127 OR4S1Q8NGB4 309 aa10.5□□□□□ -0.73
RABGGTA-213ENST00000560127 OR11L1Q8NGX0 322 aa10.5□□□□□ -0.73
RABGGTA-213ENST00000560127 OR5R1Q8NH85 324 aa10.5□□□□□ -0.73
RABGGTA-213ENST00000560127 FNDC8Q8TC99 324 aa10.5□□□□□ -0.73
RABGGTA-213ENST00000560127 NPRL2Q8WTW4 380 aa10.5□□□□□ -0.73
RABGGTA-213ENST00000560127 TMEM255BQ8WV15 326 aa10.5□□□□□ -0.73
RABGGTA-213ENST00000560127 ERGIC1Q969X5 290 aa10.5□□□□□ -0.73
RABGGTA-213ENST00000560127 RASD2Q96D21 266 aa10.5□□□□□ -0.73
RABGGTA-213ENST00000560127 CMTM5Q96DZ9 223 aa10.5□□□□□ -0.73
RABGGTA-213ENST00000560127 UFSP2Q9NUQ7 469 aa10.5□□□□□ -0.73
RABGGTA-213ENST00000560127 TMEM100Q9NV29 134 aa10.5□□□□□ -0.73
RABGGTA-213ENST00000560127 CAB39Q9Y376 341 aaPredicted RBP10.5□□□□□ -0.73
RABGGTA-213ENST00000560127 A0A1B0GVI7 797 aa10.49□□□□□ -0.73
RABGGTA-213ENST00000560127 J3QW42 95 aa10.49□□□□□ -0.73
RABGGTA-213ENST00000560127 IGF2P01344 180 aa10.49□□□□□ -0.73
RABGGTA-213ENST00000560127 NCK1P16333 377 aa10.49□□□□□ -0.73
RABGGTA-213ENST00000560127 FPR3P25089 353 aa10.49□□□□□ -0.73
RABGGTA-213ENST00000560127 CD200P41217 278 aa10.49□□□□□ -0.73
RABGGTA-213ENST00000560127 KCNJ8Q15842 424 aa10.49□□□□□ -0.73
RABGGTA-213ENST00000560127 LRRC23Q53EV4 343 aaPredicted RBP10.49□□□□□ -0.73
RABGGTA-213ENST00000560127 ALG10Q5BKT4 473 aa10.49□□□□□ -0.73
RABGGTA-213ENST00000560127 INTS11Q5TA45 600 aaKnown RBP10.49□□□□□ -0.73
RABGGTA-213ENST00000560127 VTCN1Q7Z7D3 282 aa10.49□□□□□ -0.73
RABGGTA-213ENST00000560127 RNF148Q8N7C7 305 aa10.49□□□□□ -0.73
RABGGTA-213ENST00000560127 FAM86B1Q8N7N1 296 aa10.49□□□□□ -0.73
RABGGTA-213ENST00000560127 CELF2-AS1Q8N7Q2 184 aa10.49□□□□□ -0.73
RABGGTA-213ENST00000560127 SPERTQ8NA61 448 aa10.49□□□□□ -0.73
RABGGTA-213ENST00000560127 FAM156AQ8NDB6 213 aa10.49□□□□□ -0.73
RABGGTA-213ENST00000560127 OR5L1Q8NGL2 311 aa10.49□□□□□ -0.73
RABGGTA-213ENST00000560127 OR1F12Q8NHA8 337 aa10.49□□□□□ -0.73
RABGGTA-213ENST00000560127 LYSTQ99698 3801 aa10.49□□□□□ -0.73
RABGGTA-213ENST00000560127 HOPXQ9BPY8 73 aaPredicted RBP10.49□□□□□ -0.73
RABGGTA-213ENST00000560127 CNTD2Q9H8S5 307 aa10.49□□□□□ -0.73
RABGGTA-213ENST00000560127 TAGLN3Q9UI15 199 aa10.49□□□□□ -0.73
RABGGTA-213ENST00000560127 HIF3AQ9Y2N7 669 aa10.49□□□□□ -0.73
RABGGTA-213ENST00000560127 SNX13Q9Y5W8 968 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms