RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 C17orf100A8MU93 164 aa14.36□□□□□ -0.11
RPL28-209ENST00000560055 PRR32B1ATL7 298 aa14.36□□□□□ -0.11
RPL28-209ENST00000560055 LCATP04180 440 aa14.36□□□□□ -0.11
RPL28-209ENST00000560055 SBK2P0C263 348 aa14.36□□□□□ -0.11
RPL28-209ENST00000560055 ROM1Q03395 351 aa14.36□□□□□ -0.11
RPL28-209ENST00000560055 HLXQ14774 488 aaPredicted RBP14.36□□□□□ -0.11
RPL28-209ENST00000560055 OCLNQ16625 522 aa14.36□□□□□ -0.11
RPL28-209ENST00000560055 ALKBH6Q3KRA9 238 aa14.36□□□□□ -0.11
RPL28-209ENST00000560055 MEDAGQ5VYS4 303 aa14.36□□□□□ -0.11
RPL28-209ENST00000560055 ENTHD1Q8IYW4 607 aa14.36□□□□□ -0.11
RPL28-209ENST00000560055 ZNF525Q8N782 197 aa14.36□□□□□ -0.11
RPL28-209ENST00000560055 RHOXF1Q8NHV9 184 aa14.36□□□□□ -0.11
RPL28-209ENST00000560055 RFKQ969G6 155 aa14.36□□□□□ -0.11
RPL28-209ENST00000560055 MNTQ99583 582 aa14.36□□□□□ -0.11
RPL28-209ENST00000560055 RNPEPL1Q9HAU8 725 aa14.36□□□□□ -0.11
RPL28-209ENST00000560055 DLL4Q9NR61 685 aa14.36□□□□□ -0.11
RPL28-209ENST00000560055 PTTG3PQ9NZH4 202 aa14.36□□□□□ -0.11
RPL28-209ENST00000560055 CGGBP1Q9UFW8 167 aaPredicted RBP14.36□□□□□ -0.11
RPL28-209ENST00000560055 TMEM14AQ9Y6G1 99 aa14.36□□□□□ -0.11
RPL28-209ENST00000560055 ENTPD6O75354 484 aa14.35□□□□□ -0.11
RPL28-209ENST00000560055 ERCC1P07992 297 aaPredicted RBP14.35□□□□□ -0.11
RPL28-209ENST00000560055 H2BFMP0C1H6 154 aa14.35□□□□□ -0.11
RPL28-209ENST00000560055 SLC2A1P11166 492 aa14.35□□□□□ -0.11
RPL28-209ENST00000560055 HSD11B1P28845 292 aa14.35□□□□□ -0.11
RPL28-209ENST00000560055 LIPAP38571 399 aa14.35□□□□□ -0.11
RPL28-209ENST00000560055 SLC6A9P48067 706 aa14.35□□□□□ -0.11
RPL28-209ENST00000560055 CX3CR1P49238 355 aa14.35□□□□□ -0.11
RPL28-209ENST00000560055 SLC34A1Q06495 639 aa14.35□□□□□ -0.11
RPL28-209ENST00000560055 GK2Q14410 553 aaPredicted RBP14.35□□□□□ -0.11
RPL28-209ENST00000560055 DEGS2Q6QHC5 323 aa14.35□□□□□ -0.11
RPL28-209ENST00000560055 LRRN1Q6UXK5 716 aa14.35□□□□□ -0.11
RPL28-209ENST00000560055 SLC35F2Q8IXU6 374 aa14.35□□□□□ -0.11
RPL28-209ENST00000560055 RFLNBQ8N5W9 214 aa14.35□□□□□ -0.11
RPL28-209ENST00000560055 OR51G2Q8NGK0 314 aa14.35□□□□□ -0.11
RPL28-209ENST00000560055 SNX33Q8WV41 574 aa14.35□□□□□ -0.11
RPL28-209ENST00000560055 ASB17Q8WXJ9 295 aa14.35□□□□□ -0.11
RPL28-209ENST00000560055 CLN6Q9NWW5 311 aa14.35□□□□□ -0.11
RPL28-209ENST00000560055 NKIRAS2Q9NYR9 191 aa14.35□□□□□ -0.11
RPL28-209ENST00000560055 ZANQ9Y493 2812 aa14.34□□□□□ -0.11
RPL28-209ENST00000560055 CHD3Q12873 2000 aaKnown RBP14.34□□□□□ -0.11
RPL28-209ENST00000560055 TRIM64A6NGJ6 449 aa14.34□□□□□ -0.11
RPL28-209ENST00000560055 TRIM64BA6NI03 449 aa14.34□□□□□ -0.11
RPL28-209ENST00000560055 ZSCAN5BA6NJL1 495 aa14.34□□□□□ -0.11
RPL28-209ENST00000560055 TIMM8AO60220 97 aaPredicted RBP14.34□□□□□ -0.11
RPL28-209ENST00000560055 MPZL2O60487 215 aa14.34□□□□□ -0.11
RPL28-209ENST00000560055 NCR1O76036 304 aa14.34□□□□□ -0.11
RPL28-209ENST00000560055 APOC1P02654 83 aa14.34□□□□□ -0.11
RPL28-209ENST00000560055 ADH4P08319 380 aa14.34□□□□□ -0.11
RPL28-209ENST00000560055 ZNF121P58317 390 aaPredicted RBP14.34□□□□□ -0.11
RPL28-209ENST00000560055 DSCR9P59020 149 aa14.34□□□□□ -0.11
RPL28-209ENST00000560055 POU4F2Q12837 409 aa14.34□□□□□ -0.11
RPL28-209ENST00000560055 PCGF3Q3KNV8 242 aa14.34□□□□□ -0.11
RPL28-209ENST00000560055 ZNF283Q8N7M2 679 aa14.34□□□□□ -0.11
RPL28-209ENST00000560055 SPSB4Q96A44 273 aa14.34□□□□□ -0.11
RPL28-209ENST00000560055 NIPAL2Q9H841 368 aa14.34□□□□□ -0.11
RPL28-209ENST00000560055 MYOZ1Q9NP98 299 aaPredicted RBP14.34□□□□□ -0.11
RPL28-209ENST00000560055 CYSLTR2Q9NS75 346 aa14.34□□□□□ -0.11
RPL28-209ENST00000560055 AASSQ9UDR5 926 aa14.34□□□□□ -0.11
RPL28-209ENST00000560055 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.34□□□□□ -0.11
RPL28-209ENST00000560055 LRP12Q9Y561 859 aa14.34□□□□□ -0.11
RPL28-209ENST00000560055 PLSCR5A0PG75 271 aa14.33□□□□□ -0.12
RPL28-209ENST00000560055 IQCF6A8MYZ5 107 aa14.33□□□□□ -0.12
RPL28-209ENST00000560055 IGHV1-46P01743 117 aa14.33□□□□□ -0.12
RPL28-209ENST00000560055 HPXP02790 462 aa14.33□□□□□ -0.12
RPL28-209ENST00000560055 MT-ND5P03915 603 aa14.33□□□□□ -0.12
RPL28-209ENST00000560055 CSF3P09919 207 aa14.33□□□□□ -0.12
RPL28-209ENST00000560055 MAGEB1P43366 347 aa14.33□□□□□ -0.12
RPL28-209ENST00000560055 MTNR1AP48039 350 aa14.33□□□□□ -0.12
RPL28-209ENST00000560055 ZNF81P51508 661 aa14.33□□□□□ -0.12
RPL28-209ENST00000560055 PSMA6P60900 246 aaKnown RBP14.33□□□□□ -0.12
RPL28-209ENST00000560055 CXCR4P61073 352 aa14.33□□□□□ -0.12
RPL28-209ENST00000560055 ADARB1P78563 741 aaKnown RBP14.33□□□□□ -0.12
RPL28-209ENST00000560055 ZNF92Q03936 586 aa14.33□□□□□ -0.12
RPL28-209ENST00000560055 MALLQ13021 153 aa14.33□□□□□ -0.12
RPL28-209ENST00000560055 TNK1Q13470 666 aa14.33□□□□□ -0.12
RPL28-209ENST00000560055 ZMAT1Q5H9K5 638 aa14.33□□□□□ -0.12
RPL28-209ENST00000560055 FAM209AQ5JX71 171 aa14.33□□□□□ -0.12
RPL28-209ENST00000560055 GLYATL3Q5SZD4 288 aa14.33□□□□□ -0.12
RPL28-209ENST00000560055 KCTD18Q6PI47 426 aaPredicted RBP14.33□□□□□ -0.12
RPL28-209ENST00000560055 ZNF322Q6U7Q0 402 aaPredicted RBP14.33□□□□□ -0.12
RPL28-209ENST00000560055 CLEC2AQ6UVW9 174 aa14.33□□□□□ -0.12
RPL28-209ENST00000560055 Q6ZR03 302 aa14.33□□□□□ -0.12
RPL28-209ENST00000560055 ZNF679Q8IYX0 411 aa14.33□□□□□ -0.12
RPL28-209ENST00000560055 ZNF555Q8NEP9 628 aa14.33□□□□□ -0.12
RPL28-209ENST00000560055 APH1BQ8WW43 257 aa14.33□□□□□ -0.12
RPL28-209ENST00000560055 OR8B4Q96RC9 309 aa14.33□□□□□ -0.12
RPL28-209ENST00000560055 REPIN1Q9BWE0 567 aaKnown RBP14.33□□□□□ -0.12
RPL28-209ENST00000560055 MSL2Q9HCI7 577 aa14.33□□□□□ -0.12
RPL28-209ENST00000560055 IGHV4-30-2A0A087WSY4 118 aa14.32□□□□□ -0.12
RPL28-209ENST00000560055 A0A1B0GWJ7 208 aa14.32□□□□□ -0.12
RPL28-209ENST00000560055 J3QRE1 110 aa14.32□□□□□ -0.12
RPL28-209ENST00000560055 PHYHO14832 338 aa14.32□□□□□ -0.12
RPL28-209ENST00000560055 ZNF254O75437 659 aa14.32□□□□□ -0.12
RPL28-209ENST00000560055 APOL3O95236 402 aa14.32□□□□□ -0.12
RPL28-209ENST00000560055 OR2T7P0C7T2 308 aa14.32□□□□□ -0.12
RPL28-209ENST00000560055 DAOP14920 347 aa14.32□□□□□ -0.12
RPL28-209ENST00000560055 DCTDP32321 178 aa14.32□□□□□ -0.12
RPL28-209ENST00000560055 EGR3Q06889 387 aa14.32□□□□□ -0.12
RPL28-209ENST00000560055 CDK5R2Q13319 367 aa14.32□□□□□ -0.12
RPL28-209ENST00000560055 ZNF691Q5VV52 312 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms