RNA–Protein interactions for RNA: ENST00000559961.1

SNX1-209, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-209ENST00000559961 ZNF181Q2M3W8 571 aa10.57□□□□□ -0.72
SNX1-209ENST00000559961 SPRNQ5BIV9 151 aa10.57□□□□□ -0.72
SNX1-209ENST00000559961 CLEC12AQ5QGZ9 265 aa10.57□□□□□ -0.72
SNX1-209ENST00000559961 CD276Q5ZPR3 534 aa10.57□□□□□ -0.72
SNX1-209ENST00000559961 SLC18B1Q6NT16 456 aa10.57□□□□□ -0.72
SNX1-209ENST00000559961 TSEN54Q7Z6J9 526 aaKnown RBP10.57□□□□□ -0.72
SNX1-209ENST00000559961 ZBTB46Q86UZ6 589 aa10.57□□□□□ -0.72
SNX1-209ENST00000559961 KLBQ86Z14 1044 aa10.57□□□□□ -0.72
SNX1-209ENST00000559961 FAM86B1Q8N7N1 296 aa10.57□□□□□ -0.72
SNX1-209ENST00000559961 SIGLECL1Q8N7X8 197 aa10.57□□□□□ -0.72
SNX1-209ENST00000559961 SPERTQ8NA61 448 aa10.57□□□□□ -0.72
SNX1-209ENST00000559961 DEFB108BQ8NET1 73 aa10.57□□□□□ -0.72
SNX1-209ENST00000559961 SDR9C7Q8NEX9 313 aa10.57□□□□□ -0.72
SNX1-209ENST00000559961 ZNF420Q8TAQ5 688 aaPredicted RBP10.57□□□□□ -0.72
SNX1-209ENST00000559961 RAB40AQ8WXH6 277 aa10.57□□□□□ -0.72
SNX1-209ENST00000559961 ZNF799Q96GE5 643 aa10.57□□□□□ -0.72
SNX1-209ENST00000559961 PLA2G12AQ9BZM1 189 aa10.57□□□□□ -0.72
SNX1-209ENST00000559961 WDR76Q9H967 626 aa10.57□□□□□ -0.72
SNX1-209ENST00000559961 TMEM165Q9HC07 324 aa10.57□□□□□ -0.72
SNX1-209ENST00000559961 MMP26Q9NRE1 261 aa10.57□□□□□ -0.72
SNX1-209ENST00000559961 DCAF16Q9NXF7 216 aa10.57□□□□□ -0.72
SNX1-209ENST00000559961 CLN8Q9UBY8 286 aa10.57□□□□□ -0.72
SNX1-209ENST00000559961 CYB5R1Q9UHQ9 305 aa10.57□□□□□ -0.72
SNX1-209ENST00000559961 IGHV3-64DA0A0J9YX35 117 aa10.56□□□□□ -0.72
SNX1-209ENST00000559961 TRAPPC2LH3BP13 241 aa10.56□□□□□ -0.72
SNX1-209ENST00000559961 GMDSO60547 372 aa10.56□□□□□ -0.72
SNX1-209ENST00000559961 CCNB2O95067 398 aa10.56□□□□□ -0.72
SNX1-209ENST00000559961 ZNF205O95201 554 aa10.56□□□□□ -0.72
SNX1-209ENST00000559961 ACSM4P0C7M7 580 aa10.56□□□□□ -0.72
SNX1-209ENST00000559961 PRTN3P24158 256 aa10.56□□□□□ -0.72
SNX1-209ENST00000559961 FMO3P31513 532 aa10.56□□□□□ -0.72
SNX1-209ENST00000559961 SLC15A1P46059 708 aa10.56□□□□□ -0.72
SNX1-209ENST00000559961 PITPNBP48739 271 aa10.56□□□□□ -0.72
SNX1-209ENST00000559961 ERFP50548 548 aa10.56□□□□□ -0.72
SNX1-209ENST00000559961 GK2Q14410 553 aaPredicted RBP10.56□□□□□ -0.72
SNX1-209ENST00000559961 DEFB107AQ8IZN7 70 aa10.56□□□□□ -0.72
SNX1-209ENST00000559961 ZDHHC16Q969W1 377 aa10.56□□□□□ -0.72
SNX1-209ENST00000559961 SIGLEC11Q96RL6 698 aa10.56□□□□□ -0.72
SNX1-209ENST00000559961 COPS4Q9BT78 406 aa10.56□□□□□ -0.72
SNX1-209ENST00000559961 MMADHCQ9H3L0 296 aaPredicted RBP10.56□□□□□ -0.72
SNX1-209ENST00000559961 OPA3Q9H6K4 179 aa10.56□□□□□ -0.72
SNX1-209ENST00000559961 TBC1D23Q9NUY8 699 aa10.56□□□□□ -0.72
SNX1-209ENST00000559961 C14orf119Q9NWQ9 140 aa10.56□□□□□ -0.72
SNX1-209ENST00000559961 ERVK-18Q9QC07 812 aa10.56□□□□□ -0.72
SNX1-209ENST00000559961 BAIAP2Q9UQB8 552 aa10.56□□□□□ -0.72
SNX1-209ENST00000559961 N6AMT1Q9Y5N5 214 aa10.56□□□□□ -0.72
SNX1-209ENST00000559961 CDH10Q9Y6N8 788 aa10.56□□□□□ -0.72
SNX1-209ENST00000559961 OR6C68A6NDL8 312 aa10.55□□□□□ -0.72
SNX1-209ENST00000559961 F5H0A9 414 aaPredicted RBP10.55□□□□□ -0.72
SNX1-209ENST00000559961 H0YL77 283 aa10.55□□□□□ -0.72
SNX1-209ENST00000559961 DCTN6O00399 190 aa10.55□□□□□ -0.72
SNX1-209ENST00000559961 SPRY1O43609 319 aaPredicted RBP10.55□□□□□ -0.72
SNX1-209ENST00000559961 NDUFA2O43678 99 aa10.55□□□□□ -0.72
SNX1-209ENST00000559961 FSTL3O95633 263 aa10.55□□□□□ -0.72
SNX1-209ENST00000559961 APOC1P02654 83 aa10.55□□□□□ -0.72
SNX1-209ENST00000559961 HLA-DPB1P04440 258 aa10.55□□□□□ -0.72
SNX1-209ENST00000559961 PPIAL4GP0DN37 164 aa10.55□□□□□ -0.72
SNX1-209ENST00000559961 GRK5P34947 590 aa10.55□□□□□ -0.72
SNX1-209ENST00000559961 MSX2P35548 267 aaPredicted RBP10.55□□□□□ -0.72
SNX1-209ENST00000559961 GSSP48637 474 aa10.55□□□□□ -0.72
SNX1-209ENST00000559961 NPY4RP50391 375 aa10.55□□□□□ -0.72
SNX1-209ENST00000559961 FXYD6P3P58550 94 aa10.55□□□□□ -0.72
SNX1-209ENST00000559961 BPIFB3P59826 476 aa10.55□□□□□ -0.72
SNX1-209ENST00000559961 GNGT1P63211 74 aa10.55□□□□□ -0.72
SNX1-209ENST00000559961 PAX8Q06710 450 aa10.55□□□□□ -0.72
SNX1-209ENST00000559961 OR8B8Q15620 311 aa10.55□□□□□ -0.72
SNX1-209ENST00000559961 SHISA2Q6UWI4 295 aa10.55□□□□□ -0.72
SNX1-209ENST00000559961 DRAM2Q6UX65 266 aa10.55□□□□□ -0.72
SNX1-209ENST00000559961 ZNF620Q6ZNG0 422 aa10.55□□□□□ -0.72
SNX1-209ENST00000559961 CFAP77Q6ZQR2 320 aa10.55□□□□□ -0.72
SNX1-209ENST00000559961 DCDC5Q6ZRR9 648 aa10.55□□□□□ -0.72
SNX1-209ENST00000559961 DOK3Q7L591 496 aa10.55□□□□□ -0.72
SNX1-209ENST00000559961 ZDHHC22Q8N966 263 aa10.55□□□□□ -0.72
SNX1-209ENST00000559961 BOLLQ8N9W6 283 aaKnown RBP10.55□□□□□ -0.72
SNX1-209ENST00000559961 LRGUKQ96M69 825 aa10.55□□□□□ -0.72
SNX1-209ENST00000559961 TMEM246Q9BRR3 403 aa10.55□□□□□ -0.72
SNX1-209ENST00000559961 FUZQ9BT04 418 aa10.55□□□□□ -0.72
SNX1-209ENST00000559961 TRIM15Q9C019 465 aa10.55□□□□□ -0.72
SNX1-209ENST00000559961 REEP1Q9H902 201 aa10.55□□□□□ -0.72
SNX1-209ENST00000559961 CENPMQ9NSP4 180 aa10.55□□□□□ -0.72
SNX1-209ENST00000559961 UFSP2Q9NUQ7 469 aa10.55□□□□□ -0.72
SNX1-209ENST00000559961 RNF7Q9UBF6 113 aa10.55□□□□□ -0.72
SNX1-209ENST00000559961 ZNF69Q9UC07 566 aa10.55□□□□□ -0.72
SNX1-209ENST00000559961 SVEP1Q4LDE5 3571 aa10.55□□□□□ -0.72
SNX1-209ENST00000559961 TRAV38-1A0A0B4J264 116 aa10.54□□□□□ -0.72
SNX1-209ENST00000559961 IGHV2-70DA0A0C4DH43 119 aa10.54□□□□□ -0.72
SNX1-209ENST00000559961 RIIAD1A6NNX1 92 aa10.54□□□□□ -0.72
SNX1-209ENST00000559961 ANKRD30BLA7E2S9 258 aa10.54□□□□□ -0.72
SNX1-209ENST00000559961 CD300LBA8K4G0 201 aa10.54□□□□□ -0.72
SNX1-209ENST00000559961 PHYHO14832 338 aa10.54□□□□□ -0.72
SNX1-209ENST00000559961 FSHBP01225 129 aa10.54□□□□□ -0.72
SNX1-209ENST00000559961 CRYBA1P05813 215 aa10.54□□□□□ -0.72
SNX1-209ENST00000559961 SPARCP09486 303 aa10.54□□□□□ -0.72
SNX1-209ENST00000559961 CA6P23280 308 aa10.54□□□□□ -0.72
SNX1-209ENST00000559961 HSD11B1P28845 292 aa10.54□□□□□ -0.72
SNX1-209ENST00000559961 PYCR1P32322 319 aa10.54□□□□□ -0.72
SNX1-209ENST00000559961 CD200P41217 278 aa10.54□□□□□ -0.72
SNX1-209ENST00000559961 GATA4P43694 442 aa10.54□□□□□ -0.72
SNX1-209ENST00000559961 SEC61A1P61619 476 aaKnown RBP10.54□□□□□ -0.72
SNX1-209ENST00000559961 SNCBQ16143 134 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms