RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 DOK3Q7L591 496 aa10.29□□□□□ -0.76
SPG11-219ENST00000559822 MRPL21Q7Z2W9 205 aaKnown RBP10.29□□□□□ -0.76
SPG11-219ENST00000559822 MOGAT3Q86VF5 341 aa10.29□□□□□ -0.76
SPG11-219ENST00000559822 KLBQ86Z14 1044 aa10.29□□□□□ -0.76
SPG11-219ENST00000559822 ZDHHC21Q8IVQ6 265 aa10.29□□□□□ -0.76
SPG11-219ENST00000559822 ZDHHC22Q8N966 263 aa10.29□□□□□ -0.76
SPG11-219ENST00000559822 SDR9C7Q8NEX9 313 aa10.29□□□□□ -0.76
SPG11-219ENST00000559822 OR8B3Q8NGG8 313 aa10.29□□□□□ -0.76
SPG11-219ENST00000559822 OR52E2Q8NGJ4 325 aa10.29□□□□□ -0.76
SPG11-219ENST00000559822 OR4C15Q8NGM1 316 aa10.29□□□□□ -0.76
SPG11-219ENST00000559822 OR2T4Q8NH00 348 aa10.29□□□□□ -0.76
SPG11-219ENST00000559822 ZNF420Q8TAQ5 688 aaPredicted RBP10.29□□□□□ -0.76
SPG11-219ENST00000559822 OR8B2Q96RD0 313 aa10.29□□□□□ -0.76
SPG11-219ENST00000559822 CDRT15Q96T59 188 aa10.29□□□□□ -0.76
SPG11-219ENST00000559822 PLA2G12AQ9BZM1 189 aa10.29□□□□□ -0.76
SPG11-219ENST00000559822 TMEM165Q9HC07 324 aa10.29□□□□□ -0.76
SPG11-219ENST00000559822 ESM1Q9NQ30 184 aa10.29□□□□□ -0.76
SPG11-219ENST00000559822 CD300AQ9UGN4 299 aa10.29□□□□□ -0.76
SPG11-219ENST00000559822 TAGLN3Q9UI15 199 aa10.29□□□□□ -0.76
SPG11-219ENST00000559822 PPIAL4AQ9Y536 164 aa10.29□□□□□ -0.76
SPG11-219ENST00000559822 OR6C68A6NDL8 312 aa10.28□□□□□ -0.76
SPG11-219ENST00000559822 F5H5P2 479 aa10.28□□□□□ -0.76
SPG11-219ENST00000559822 H0YL77 283 aa10.28□□□□□ -0.76
SPG11-219ENST00000559822 M0R135 149 aa10.28□□□□□ -0.76
SPG11-219ENST00000559822 DCTN3O75935 186 aa10.28□□□□□ -0.76
SPG11-219ENST00000559822 PRTN3P24158 256 aa10.28□□□□□ -0.76
SPG11-219ENST00000559822 GGT2P36268 569 aa10.28□□□□□ -0.76
SPG11-219ENST00000559822 CD200P41217 278 aa10.28□□□□□ -0.76
SPG11-219ENST00000559822 MTNR1AP48039 350 aa10.28□□□□□ -0.76
SPG11-219ENST00000559822 MNAT1P51948 309 aa10.28□□□□□ -0.76
SPG11-219ENST00000559822 MXRA7P84157 204 aa10.28□□□□□ -0.76
SPG11-219ENST00000559822 PAX8Q06710 450 aa10.28□□□□□ -0.76
SPG11-219ENST00000559822 HNRNPA0Q13151 305 aaKnown RBP10.28□□□□□ -0.76
SPG11-219ENST00000559822 KCNJ8Q15842 424 aa10.28□□□□□ -0.76
SPG11-219ENST00000559822 ZNF404Q494X3 552 aa10.28□□□□□ -0.76
SPG11-219ENST00000559822 AWAT1Q58HT5 328 aa10.28□□□□□ -0.76
SPG11-219ENST00000559822 PGBD2Q6P3X8 592 aa10.28□□□□□ -0.76
SPG11-219ENST00000559822 SIGLECL1Q8N7X8 197 aa10.28□□□□□ -0.76
SPG11-219ENST00000559822 PROKR2Q8NFJ6 384 aa10.28□□□□□ -0.76
SPG11-219ENST00000559822 Q8TCH9 128 aa10.28□□□□□ -0.76
SPG11-219ENST00000559822 SPRYD4Q8WW59 207 aaPredicted RBP10.28□□□□□ -0.76
SPG11-219ENST00000559822 ZNF799Q96GE5 643 aa10.28□□□□□ -0.76
SPG11-219ENST00000559822 TMEM246Q9BRR3 403 aa10.28□□□□□ -0.76
SPG11-219ENST00000559822 MS4A7Q9GZW8 240 aaPredicted RBP10.28□□□□□ -0.76
SPG11-219ENST00000559822 WDR76Q9H967 626 aa10.28□□□□□ -0.76
SPG11-219ENST00000559822 ZNF69Q9UC07 566 aa10.28□□□□□ -0.76
SPG11-219ENST00000559822 CDH10Q9Y6N8 788 aa10.28□□□□□ -0.76
SPG11-219ENST00000559822 IGHV2-70DA0A0C4DH43 119 aa10.27□□□□□ -0.77
SPG11-219ENST00000559822 PHYHO14832 338 aa10.27□□□□□ -0.77
SPG11-219ENST00000559822 ZNF205O95201 554 aa10.27□□□□□ -0.77
SPG11-219ENST00000559822 HLA-DPB1P04440 258 aa10.27□□□□□ -0.77
SPG11-219ENST00000559822 HKR1P10072 659 aa10.27□□□□□ -0.77
SPG11-219ENST00000559822 PITPNBP48739 271 aa10.27□□□□□ -0.77
SPG11-219ENST00000559822 HMGA2P52926 109 aa10.27□□□□□ -0.77
SPG11-219ENST00000559822 BAMBIQ13145 260 aa10.27□□□□□ -0.77
SPG11-219ENST00000559822 RSPO1Q2MKA7 263 aaPredicted RBP10.27□□□□□ -0.77
SPG11-219ENST00000559822 TUSC1Q2TAM9 212 aa10.27□□□□□ -0.77
SPG11-219ENST00000559822 CLEC12AQ5QGZ9 265 aa10.27□□□□□ -0.77
SPG11-219ENST00000559822 SLC35F1Q5T1Q4 408 aa10.27□□□□□ -0.77
SPG11-219ENST00000559822 DRAM2Q6UX65 266 aa10.27□□□□□ -0.77
SPG11-219ENST00000559822 DCDC5Q6ZRR9 648 aa10.27□□□□□ -0.77
SPG11-219ENST00000559822 DEFB107AQ8IZN7 70 aa10.27□□□□□ -0.77
SPG11-219ENST00000559822 PARP8Q8N3A8 854 aa10.27□□□□□ -0.77
SPG11-219ENST00000559822 RAB40AQ8WXH6 277 aa10.27□□□□□ -0.77
SPG11-219ENST00000559822 SLCO4A1Q96BD0 722 aa10.27□□□□□ -0.77
SPG11-219ENST00000559822 TRIM15Q9C019 465 aa10.27□□□□□ -0.77
SPG11-219ENST00000559822 FN3KQ9H479 309 aa10.27□□□□□ -0.77
SPG11-219ENST00000559822 OPA3Q9H6K4 179 aa10.27□□□□□ -0.77
SPG11-219ENST00000559822 FN3KRPQ9HA64 309 aa10.27□□□□□ -0.77
SPG11-219ENST00000559822 PNRC2Q9NPJ4 139 aaKnown RBP10.27□□□□□ -0.77
SPG11-219ENST00000559822 TRIM36Q9NQ86 728 aa10.27□□□□□ -0.77
SPG11-219ENST00000559822 MRPL22Q9NWU5 206 aaKnown RBP10.27□□□□□ -0.77
SPG11-219ENST00000559822 CLN8Q9UBY8 286 aa10.27□□□□□ -0.77
SPG11-219ENST00000559822 ARL2BPQ9Y2Y0 163 aa10.27□□□□□ -0.77
SPG11-219ENST00000559822 LYVE1Q9Y5Y7 322 aa10.27□□□□□ -0.77
SPG11-219ENST00000559822 TENM1Q9UKZ4 2725 aa10.26□□□□□ -0.77
SPG11-219ENST00000559822 DNAJC9-AS1A6NH13 148 aa10.26□□□□□ -0.77
SPG11-219ENST00000559822 TNFRSF11BO00300 401 aa10.26□□□□□ -0.77
SPG11-219ENST00000559822 BHLHE40O14503 412 aa10.26□□□□□ -0.77
SPG11-219ENST00000559822 SPRY1O43609 319 aaPredicted RBP10.26□□□□□ -0.77
SPG11-219ENST00000559822 GMDSO60547 372 aa10.26□□□□□ -0.77
SPG11-219ENST00000559822 CD80P33681 288 aa10.26□□□□□ -0.77
SPG11-219ENST00000559822 MSX2P35548 267 aaPredicted RBP10.26□□□□□ -0.77
SPG11-219ENST00000559822 NPY4RP50391 375 aa10.26□□□□□ -0.77
SPG11-219ENST00000559822 BLVRAP53004 296 aa10.26□□□□□ -0.77
SPG11-219ENST00000559822 MZT1Q08AG7 82 aa10.26□□□□□ -0.77
SPG11-219ENST00000559822 TAF13Q15543 124 aa10.26□□□□□ -0.77
SPG11-219ENST00000559822 OR8G1Q15617 311 aa10.26□□□□□ -0.77
SPG11-219ENST00000559822 KLF17Q5JT82 389 aaPredicted RBP10.26□□□□□ -0.77
SPG11-219ENST00000559822 RASSF6Q6ZTQ3 369 aa10.26□□□□□ -0.77
SPG11-219ENST00000559822 C9orf139Q6ZV77 190 aa10.26□□□□□ -0.77
SPG11-219ENST00000559822 ARHGAP24Q8N264 748 aa10.26□□□□□ -0.77
SPG11-219ENST00000559822 SPERTQ8NA61 448 aa10.26□□□□□ -0.77
SPG11-219ENST00000559822 PLPP7Q8NBV4 271 aa10.26□□□□□ -0.77
SPG11-219ENST00000559822 SLC25A28Q96A46 364 aa10.26□□□□□ -0.77
SPG11-219ENST00000559822 UPRTQ96BW1 309 aa10.26□□□□□ -0.77
SPG11-219ENST00000559822 MAP6Q96JE9 813 aa10.26□□□□□ -0.77
SPG11-219ENST00000559822 MUC13Q9H3R2 512 aa10.26□□□□□ -0.77
SPG11-219ENST00000559822 EGLN3Q9H6Z9 239 aa10.26□□□□□ -0.77
SPG11-219ENST00000559822 TBC1D23Q9NUY8 699 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms