RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 C22orf46C9J442 243 aa10.89□□□□□ -0.67
TPM1-220ENST00000559556 GSTA4O15217 222 aa10.89□□□□□ -0.67
TPM1-220ENST00000559556 FAM20BO75063 409 aa10.89□□□□□ -0.67
TPM1-220ENST00000559556 KNG1P01042 644 aa10.89□□□□□ -0.67
TPM1-220ENST00000559556 ACSM4P0C7M7 580 aa10.89□□□□□ -0.67
TPM1-220ENST00000559556 IRF2P14316 349 aa10.89□□□□□ -0.67
TPM1-220ENST00000559556 GSK3BP49841 420 aa10.89□□□□□ -0.67
TPM1-220ENST00000559556 NPY4RP50391 375 aa10.89□□□□□ -0.67
TPM1-220ENST00000559556 RPS6KA3P51812 740 aa10.89□□□□□ -0.67
TPM1-220ENST00000559556 SLC7A2P52569 658 aa10.89□□□□□ -0.67
TPM1-220ENST00000559556 RAG2P55895 527 aa10.89□□□□□ -0.67
TPM1-220ENST00000559556 MIDNQ504T8 468 aa10.89□□□□□ -0.67
TPM1-220ENST00000559556 CORO6Q6QEF8 472 aa10.89□□□□□ -0.67
TPM1-220ENST00000559556 CFAP77Q6ZQR2 320 aa10.89□□□□□ -0.67
TPM1-220ENST00000559556 TMEM86BQ8N661 226 aa10.89□□□□□ -0.67
TPM1-220ENST00000559556 OR4F5Q8NH21 305 aa10.89□□□□□ -0.67
TPM1-220ENST00000559556 RP9Q8TA86 221 aaKnown RBP10.89□□□□□ -0.67
TPM1-220ENST00000559556 DHRS1Q96LJ7 313 aa10.89□□□□□ -0.67
TPM1-220ENST00000559556 NOX4Q9NPH5 578 aa10.89□□□□□ -0.67
TPM1-220ENST00000559556 ARMCX1Q9P291 453 aa10.89□□□□□ -0.67
TPM1-220ENST00000559556 TRBV4-1A0A0J9YWV2 114 aa10.88□□□□□ -0.67
TPM1-220ENST00000559556 NDUFA7O95182 113 aa10.88□□□□□ -0.67
TPM1-220ENST00000559556 PPP1R3DO95685 299 aa10.88□□□□□ -0.67
TPM1-220ENST00000559556 PTBP3O95758 552 aaKnown RBP10.88□□□□□ -0.67
TPM1-220ENST00000559556 MMP9P14780 707 aa10.88□□□□□ -0.67
TPM1-220ENST00000559556 RHCEP18577 417 aa10.88□□□□□ -0.67
TPM1-220ENST00000559556 PRSS12P56730 875 aa10.88□□□□□ -0.67
TPM1-220ENST00000559556 RPL15P61313 204 aaKnown RBP10.88□□□□□ -0.67
TPM1-220ENST00000559556 RELBQ01201 579 aa10.88□□□□□ -0.67
TPM1-220ENST00000559556 SF3A3Q12874 501 aaKnown RBP eCLIP10.88□□□□□ -0.679e-9■■■■□ 23.4
TPM1-220ENST00000559556 ECH1Q13011 328 aa10.88□□□□□ -0.67
TPM1-220ENST00000559556 SEC23BQ15437 767 aa10.88□□□□□ -0.67
TPM1-220ENST00000559556 SLC18B1Q6NT16 456 aa10.88□□□□□ -0.67
TPM1-220ENST00000559556 SMARCD3Q6STE5 483 aa10.88□□□□□ -0.67
TPM1-220ENST00000559556 Q6YL49 198 aa10.88□□□□□ -0.67
TPM1-220ENST00000559556 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.88□□□□□ -0.67
TPM1-220ENST00000559556 OR11L1Q8NGX0 322 aa10.88□□□□□ -0.67
TPM1-220ENST00000559556 FANK1Q8TC84 345 aa10.88□□□□□ -0.67
TPM1-220ENST00000559556 ZDHHC16Q969W1 377 aa10.88□□□□□ -0.67
TPM1-220ENST00000559556 C7orf34Q96L11 122 aa10.88□□□□□ -0.67
TPM1-220ENST00000559556 ATF6BQ99941 703 aa10.88□□□□□ -0.67
TPM1-220ENST00000559556 CITED1Q99966 193 aa10.88□□□□□ -0.67
TPM1-220ENST00000559556 HOPXQ9BPY8 73 aaPredicted RBP10.88□□□□□ -0.67
TPM1-220ENST00000559556 FUZQ9BT04 418 aa10.88□□□□□ -0.67
TPM1-220ENST00000559556 CHIAQ9BZP6 476 aa10.88□□□□□ -0.67
TPM1-220ENST00000559556 MARCH7Q9H992 704 aa10.88□□□□□ -0.67
TPM1-220ENST00000559556 BEX1Q9HBH7 125 aa10.88□□□□□ -0.67
TPM1-220ENST00000559556 KRCC1Q9NPI7 259 aaPredicted RBP10.88□□□□□ -0.67
TPM1-220ENST00000559556 NDUFAF4Q9P032 175 aa10.88□□□□□ -0.67
TPM1-220ENST00000559556 TMCC3Q9ULS5 477 aa10.88□□□□□ -0.67
TPM1-220ENST00000559556 B9D1Q9UPM9 204 aa10.88□□□□□ -0.67
TPM1-220ENST00000559556 AURKCQ9UQB9 309 aa10.88□□□□□ -0.67
TPM1-220ENST00000559556 POMT1Q9Y6A1 747 aa10.88□□□□□ -0.67
TPM1-220ENST00000559556 UNC119BA6NIH7 251 aa10.87□□□□□ -0.67
TPM1-220ENST00000559556 P2RY10O00398 339 aa10.87□□□□□ -0.67
TPM1-220ENST00000559556 TNFRSF13BO14836 293 aaPredicted RBP10.87□□□□□ -0.67
TPM1-220ENST00000559556 SFTPBP07988 381 aa10.87□□□□□ -0.67
TPM1-220ENST00000559556 MELTFP08582 738 aa10.87□□□□□ -0.67
TPM1-220ENST00000559556 COX4I1P13073 169 aa10.87□□□□□ -0.67
TPM1-220ENST00000559556 CFHR2P36980 270 aa10.87□□□□□ -0.67
TPM1-220ENST00000559556 MDH1P40925 334 aaKnown RBP10.87□□□□□ -0.67
TPM1-220ENST00000559556 CENPAP49450 140 aa10.87□□□□□ -0.67
TPM1-220ENST00000559556 SRSF4Q08170 494 aaKnown RBP10.87□□□□□ -0.67
TPM1-220ENST00000559556 TRAP1Q12931 704 aaKnown RBP10.87□□□□□ -0.67
TPM1-220ENST00000559556 MALLQ13021 153 aa10.87□□□□□ -0.67
TPM1-220ENST00000559556 MPPED2Q15777 294 aa10.87□□□□□ -0.67
TPM1-220ENST00000559556 PRAMEF6Q5VXH4 476 aa10.87□□□□□ -0.67
TPM1-220ENST00000559556 RUSC1-AS1Q66K80 236 aa10.87□□□□□ -0.67
TPM1-220ENST00000559556 OLFML2AQ68BL7 652 aa10.87□□□□□ -0.67
TPM1-220ENST00000559556 FIP1L1Q6UN15 594 aaKnown RBP10.87□□□□□ -0.67
TPM1-220ENST00000559556 HACD2Q6Y1H2 254 aa10.87□□□□□ -0.67
TPM1-220ENST00000559556 ZBTB46Q86UZ6 589 aa10.87□□□□□ -0.67
TPM1-220ENST00000559556 LINC00346Q8IVM7 164 aa10.87□□□□□ -0.67
TPM1-220ENST00000559556 OR6V1Q8N148 313 aa10.87□□□□□ -0.67
TPM1-220ENST00000559556 KIR3DL3Q8N743 410 aa10.87□□□□□ -0.67
TPM1-220ENST00000559556 C19orf18Q8NEA5 215 aa10.87□□□□□ -0.67
TPM1-220ENST00000559556 FAM162AQ96A26 154 aa10.87□□□□□ -0.67
TPM1-220ENST00000559556 FAM71F1Q96KD3 344 aaPredicted RBP10.87□□□□□ -0.67
TPM1-220ENST00000559556 TECTBQ96PL2 329 aa10.87□□□□□ -0.67
TPM1-220ENST00000559556 ERMAPQ96PL5 475 aaPredicted RBP10.87□□□□□ -0.67
TPM1-220ENST00000559556 PCGF1Q9BSM1 259 aa10.87□□□□□ -0.67
TPM1-220ENST00000559556 PNRC2Q9NPJ4 139 aaKnown RBP10.87□□□□□ -0.67
TPM1-220ENST00000559556 UFSP2Q9NUQ7 469 aa10.87□□□□□ -0.67
TPM1-220ENST00000559556 C1RLQ9NZP8 487 aa10.87□□□□□ -0.67
TPM1-220ENST00000559556 PDP1Q9P0J1 537 aaPredicted RBP10.87□□□□□ -0.67
TPM1-220ENST00000559556 ABCD2Q9UBJ2 740 aa10.87□□□□□ -0.67
TPM1-220ENST00000559556 CTSZQ9UBR2 303 aa10.87□□□□□ -0.67
TPM1-220ENST00000559556 CYB5R1Q9UHQ9 305 aa10.87□□□□□ -0.67
TPM1-220ENST00000559556 NOP16Q9Y3C1 178 aaKnown RBP10.87□□□□□ -0.67
TPM1-220ENST00000559556 COL7A1Q02388 2944 aa10.86□□□□□ -0.67
TPM1-220ENST00000559556 ZNF879B4DU55 563 aa10.86□□□□□ -0.67
TPM1-220ENST00000559556 F5H5K5 113 aa10.86□□□□□ -0.67
TPM1-220ENST00000559556 NDUFAB1O14561 156 aa10.86□□□□□ -0.67
TPM1-220ENST00000559556 ARPC3O15145 178 aa10.86□□□□□ -0.67
TPM1-220ENST00000559556 RENP00797 406 aa10.86□□□□□ -0.67
TPM1-220ENST00000559556 CRYBA1P05813 215 aa10.86□□□□□ -0.67
TPM1-220ENST00000559556 LIPFP07098 398 aa10.86□□□□□ -0.67
TPM1-220ENST00000559556 NCK1P16333 377 aa10.86□□□□□ -0.67
TPM1-220ENST00000559556 GGT2P36268 569 aa10.86□□□□□ -0.67
TPM1-220ENST00000559556 OR8G1Q15617 311 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms