RNA–Protein interactions for RNA: ENST00000559043.1

CDC42BPB-204, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 5

Gene CDC42BPB, Length 1,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-204ENST00000559043 KIR3DL2P43630 455 aa13.95□□□□□ -0.18
CDC42BPB-204ENST00000559043 CCR9P51686 369 aa13.95□□□□□ -0.18
CDC42BPB-204ENST00000559043 FOXF2Q12947 444 aa13.95□□□□□ -0.18
CDC42BPB-204ENST00000559043 EIF2S3LQ2VIR3 472 aaKnown RBP13.95□□□□□ -0.18
CDC42BPB-204ENST00000559043 SLC18B1Q6NT16 456 aa13.95□□□□□ -0.18
CDC42BPB-204ENST00000559043 CREB3L2Q70SY1 520 aa13.95□□□□□ -0.18
CDC42BPB-204ENST00000559043 LIX1LQ8IVB5 337 aa13.95□□□□□ -0.18
CDC42BPB-204ENST00000559043 TUSC5Q8IXB3 177 aa13.95□□□□□ -0.18
CDC42BPB-204ENST00000559043 ZNF679Q8IYX0 411 aa13.95□□□□□ -0.18
CDC42BPB-204ENST00000559043 GCNT2Q8N0V5 402 aa13.95□□□□□ -0.18
CDC42BPB-204ENST00000559043 NAXEQ8NCW5 288 aa13.95□□□□□ -0.18
CDC42BPB-204ENST00000559043 GPR148Q8TDV2 347 aa13.95□□□□□ -0.18
CDC42BPB-204ENST00000559043 WNT2BQ93097 391 aa13.95□□□□□ -0.18
CDC42BPB-204ENST00000559043 PRRG4Q9BZD6 226 aa13.95□□□□□ -0.18
CDC42BPB-204ENST00000559043 DPAGT1Q9H3H5 408 aa13.95□□□□□ -0.18
CDC42BPB-204ENST00000559043 PLEKHA1Q9HB21 404 aa13.95□□□□□ -0.18
CDC42BPB-204ENST00000559043 MED29Q9NX70 200 aa13.95□□□□□ -0.18
CDC42BPB-204ENST00000559043 OR5V1Q9UGF6 321 aa13.95□□□□□ -0.18
CDC42BPB-204ENST00000559043 MRPS7Q9Y2R9 242 aaKnown RBP13.95□□□□□ -0.18
CDC42BPB-204ENST00000559043 FLVCR1Q9Y5Y0 555 aa13.95□□□□□ -0.18
CDC42BPB-204ENST00000559043 ESPL1Q14674 2120 aa13.95□□□□□ -0.18
CDC42BPB-204ENST00000559043 PCNX1Q96RV3 2341 aa13.94□□□□□ -0.18
CDC42BPB-204ENST00000559043 FAM172BPA6NC97 362 aa13.94□□□□□ -0.18
CDC42BPB-204ENST00000559043 MBD3L4A6NDZ8 208 aaPredicted RBP13.94□□□□□ -0.18
CDC42BPB-204ENST00000559043 MBD3L3A6NE82 208 aaPredicted RBP13.94□□□□□ -0.18
CDC42BPB-204ENST00000559043 MBD3L5A6NJ08 208 aaPredicted RBP13.94□□□□□ -0.18
CDC42BPB-204ENST00000559043 FIGNL2A6NMB9 653 aa13.94□□□□□ -0.18
CDC42BPB-204ENST00000559043 GPR171O14626 319 aa13.94□□□□□ -0.18
CDC42BPB-204ENST00000559043 HLA-DQA2P01906 255 aa13.94□□□□□ -0.18
CDC42BPB-204ENST00000559043 YES1P07947 543 aa13.94□□□□□ -0.18
CDC42BPB-204ENST00000559043 IFNGR1P15260 489 aa13.94□□□□□ -0.18
CDC42BPB-204ENST00000559043 POU3F1Q03052 451 aaPredicted RBP13.94□□□□□ -0.18
CDC42BPB-204ENST00000559043 RBPJQ06330 500 aa13.94□□□□□ -0.18
CDC42BPB-204ENST00000559043 DYRK1AQ13627 763 aa13.94□□□□□ -0.18
CDC42BPB-204ENST00000559043 KLF9Q13886 244 aaPredicted RBP13.94□□□□□ -0.18
CDC42BPB-204ENST00000559043 MEP1BQ16820 701 aa13.94□□□□□ -0.18
CDC42BPB-204ENST00000559043 WDR38Q5JTN6 314 aa13.94□□□□□ -0.18
CDC42BPB-204ENST00000559043 TEX30Q5JUR7 227 aa13.94□□□□□ -0.18
CDC42BPB-204ENST00000559043 ZNF676Q8N7Q3 588 aa13.94□□□□□ -0.18
CDC42BPB-204ENST00000559043 MBD3L2Q8NHZ7 208 aaPredicted RBP13.94□□□□□ -0.18
CDC42BPB-204ENST00000559043 THRSPQ92748 146 aa13.94□□□□□ -0.18
CDC42BPB-204ENST00000559043 MCHR2Q969V1 340 aa13.94□□□□□ -0.18
CDC42BPB-204ENST00000559043 TRAF4Q9BUZ4 470 aaPredicted RBP13.94□□□□□ -0.18
CDC42BPB-204ENST00000559043 EMC6Q9BV81 110 aa13.94□□□□□ -0.18
CDC42BPB-204ENST00000559043 BEX2Q9BXY8 128 aa13.94□□□□□ -0.18
CDC42BPB-204ENST00000559043 ELOVL3Q9HB03 270 aa13.94□□□□□ -0.18
CDC42BPB-204ENST00000559043 ETV7Q9Y603 341 aa13.94□□□□□ -0.18
CDC42BPB-204ENST00000559043 IGKV3D-15A0A087WSY6 115 aa13.94□□□□□ -0.18
CDC42BPB-204ENST00000559043 CENPBD1B2RD01 187 aa13.94□□□□□ -0.18
CDC42BPB-204ENST00000559043 GNLYP22749 145 aa13.94□□□□□ -0.18
CDC42BPB-204ENST00000559043 CFPP27918 469 aa13.94□□□□□ -0.18
CDC42BPB-204ENST00000559043 CRABP1P29762 137 aa13.94□□□□□ -0.18
CDC42BPB-204ENST00000559043 SOX2P48431 317 aa13.94□□□□□ -0.18
CDC42BPB-204ENST00000559043 CDK10Q15131 360 aa13.94□□□□□ -0.18
CDC42BPB-204ENST00000559043 POU4F3Q15319 338 aa13.94□□□□□ -0.18
CDC42BPB-204ENST00000559043 GUSBP1Q15486 140 aa13.94□□□□□ -0.18
CDC42BPB-204ENST00000559043 ETFDHQ16134 617 aa13.94□□□□□ -0.18
CDC42BPB-204ENST00000559043 FREM1Q5H8C1 2179 aa13.94□□□□□ -0.18
CDC42BPB-204ENST00000559043 PRSS45Q7RTY3 260 aa13.94□□□□□ -0.18
CDC42BPB-204ENST00000559043 OR10AC1Q8NH08 325 aa13.94□□□□□ -0.18
CDC42BPB-204ENST00000559043 RAB40AQ8WXH6 277 aa13.94□□□□□ -0.18
CDC42BPB-204ENST00000559043 PHF3Q92576 2039 aaKnown RBP13.94□□□□□ -0.18
CDC42BPB-204ENST00000559043 SF3B5Q9BWJ5 86 aaKnown RBP13.94□□□□□ -0.18
CDC42BPB-204ENST00000559043 COPZ2Q9P299 210 aa13.94□□□□□ -0.18
CDC42BPB-204ENST00000559043 NUBP2Q9Y5Y2 271 aa13.94□□□□□ -0.18
CDC42BPB-204ENST00000559043 TRAV8-7A0A075B6U6 113 aa13.93□□□□□ -0.18
CDC42BPB-204ENST00000559043 TRGV8A0A0C4DH27 118 aa13.93□□□□□ -0.18
CDC42BPB-204ENST00000559043 C7orf66A4D0T2 115 aa13.93□□□□□ -0.18
CDC42BPB-204ENST00000559043 A6NIZ1 184 aa13.93□□□□□ -0.18
CDC42BPB-204ENST00000559043 SULT1B1O43704 296 aa13.93□□□□□ -0.18
CDC42BPB-204ENST00000559043 VAMP5O95183 116 aa13.93□□□□□ -0.18
CDC42BPB-204ENST00000559043 ZNF43P17038 809 aa13.93□□□□□ -0.18
CDC42BPB-204ENST00000559043 PTGER4P35408 488 aa13.93□□□□□ -0.18
CDC42BPB-204ENST00000559043 MNDAP41218 407 aa13.93□□□□□ -0.18
CDC42BPB-204ENST00000559043 CA7P43166 264 aa13.93□□□□□ -0.18
CDC42BPB-204ENST00000559043 SCAND1P57086 179 aa13.93□□□□□ -0.18
CDC42BPB-204ENST00000559043 RAP1BP61224 184 aa13.93□□□□□ -0.18
CDC42BPB-204ENST00000559043 RAP1AP62834 184 aa13.93□□□□□ -0.18
CDC42BPB-204ENST00000559043 MRPS15P82914 257 aaKnown RBP13.93□□□□□ -0.18
CDC42BPB-204ENST00000559043 PMPCAQ10713 525 aa13.93□□□□□ -0.18
CDC42BPB-204ENST00000559043 MELKQ14680 651 aa13.93□□□□□ -0.18
CDC42BPB-204ENST00000559043 LRRN1Q6UXK5 716 aa13.93□□□□□ -0.18
CDC42BPB-204ENST00000559043 SLC35D2Q76EJ3 337 aa13.93□□□□□ -0.18
CDC42BPB-204ENST00000559043 ZNF454Q8N9F8 522 aa13.93□□□□□ -0.18
CDC42BPB-204ENST00000559043 OR51A4Q8NGJ6 313 aa13.93□□□□□ -0.18
CDC42BPB-204ENST00000559043 ASB10Q8WXI3 467 aa13.93□□□□□ -0.18
CDC42BPB-204ENST00000559043 AKAP1Q92667 903 aaKnown RBP eCLIP13.93□□□□□ -0.18
CDC42BPB-204ENST00000559043 TMEM106AQ96A25 262 aa13.93□□□□□ -0.18
CDC42BPB-204ENST00000559043 INTS12Q96CB8 462 aaKnown RBP13.93□□□□□ -0.18
CDC42BPB-204ENST00000559043 DMRTA2Q96SC8 542 aa13.93□□□□□ -0.18
CDC42BPB-204ENST00000559043 BCO1Q9HAY6 547 aa13.93□□□□□ -0.18
CDC42BPB-204ENST00000559043 ZNF275Q9NSD4 429 aaPredicted RBP13.93□□□□□ -0.18
CDC42BPB-204ENST00000559043 DHFRP00374 187 aa13.92□□□□□ -0.18
CDC42BPB-204ENST00000559043 TCRBP04435 133 aa13.92□□□□□ -0.18
CDC42BPB-204ENST00000559043 HOXD4P09016 255 aaPredicted RBP13.92□□□□□ -0.18
CDC42BPB-204ENST00000559043 GSTT2P0CG29 244 aa13.92□□□□□ -0.18
CDC42BPB-204ENST00000559043 GSTT2BP0CG30 244 aa13.92□□□□□ -0.18
CDC42BPB-204ENST00000559043 CLDN12P56749 244 aa13.92□□□□□ -0.18
CDC42BPB-204ENST00000559043 CLDN17P56750 224 aa13.92□□□□□ -0.18
CDC42BPB-204ENST00000559043 GLO1Q04760 184 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms