RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 LIPNQ5VXI9 398 aa5.7□□□□□ -1.5
CHRNA3-204ENST00000559002 RNLSQ5VYX0 342 aa5.7□□□□□ -1.5
CHRNA3-204ENST00000559002 VHLLQ6RSH7 139 aa5.7□□□□□ -1.5
CHRNA3-204ENST00000559002 ZNF704Q6ZNC4 412 aaPredicted RBP5.7□□□□□ -1.5
CHRNA3-204ENST00000559002 RFPL4BQ6ZWI9 263 aa5.7□□□□□ -1.5
CHRNA3-204ENST00000559002 TMEM200AQ86VY9 491 aa5.7□□□□□ -1.5
CHRNA3-204ENST00000559002 COMMD2Q86X83 199 aa5.7□□□□□ -1.5
CHRNA3-204ENST00000559002 KLBQ86Z14 1044 aa5.7□□□□□ -1.5
CHRNA3-204ENST00000559002 EGFL6Q8IUX8 553 aa5.7□□□□□ -1.5
CHRNA3-204ENST00000559002 C1orf174Q8IYL3 243 aa5.7□□□□□ -1.5
CHRNA3-204ENST00000559002 NUP37Q8NFH4 326 aa5.7□□□□□ -1.5
CHRNA3-204ENST00000559002 OR1J1Q8NGS3 322 aa5.7□□□□□ -1.5
CHRNA3-204ENST00000559002 OR52N1Q8NH53 320 aa5.7□□□□□ -1.5
CHRNA3-204ENST00000559002 SPRYD4Q8WW59 207 aaPredicted RBP5.7□□□□□ -1.5
CHRNA3-204ENST00000559002 HS3ST6Q96QI5 342 aa5.7□□□□□ -1.5
CHRNA3-204ENST00000559002 NR1H4Q96RI1 486 aaPredicted RBP5.7□□□□□ -1.5
CHRNA3-204ENST00000559002 C1QTNF5Q9BXJ0 243 aa5.7□□□□□ -1.5
CHRNA3-204ENST00000559002 CDCA4Q9BXL8 241 aa5.7□□□□□ -1.5
CHRNA3-204ENST00000559002 OR10A2Q9H208 303 aa5.7□□□□□ -1.5
CHRNA3-204ENST00000559002 ISG20L2Q9H9L3 353 aaKnown RBP5.7□□□□□ -1.5
CHRNA3-204ENST00000559002 VCX3AQ9NNX9 186 aa5.7□□□□□ -1.5
CHRNA3-204ENST00000559002 TRIM36Q9NQ86 728 aa5.7□□□□□ -1.5
CHRNA3-204ENST00000559002 TBCCD1Q9NVR7 557 aa5.7□□□□□ -1.5
CHRNA3-204ENST00000559002 CLEC2DQ9UHP7 191 aa5.7□□□□□ -1.5
CHRNA3-204ENST00000559002 R4GMQ9 66 aa5.7□□□□□ -1.5
CHRNA3-204ENST00000559002 ICE1Q9Y2F5 2266 aa5.7□□□□□ -1.5
CHRNA3-204ENST00000559002 ABCA12Q86UK0 2595 aa5.7□□□□□ -1.5
CHRNA3-204ENST00000559002 HRNRQ86YZ3 2850 aaPredicted RBP5.7□□□□□ -1.5
CHRNA3-204ENST00000559002 HCFC1P51610 2035 aa5.7□□□□□ -1.5
CHRNA3-204ENST00000559002 PKDREJQ9NTG1 2253 aa5.69□□□□□ -1.5
CHRNA3-204ENST00000559002 A0A087WXM4 84 aa5.69□□□□□ -1.5
CHRNA3-204ENST00000559002 SHISA9B4DS77 424 aa5.69□□□□□ -1.5
CHRNA3-204ENST00000559002 XRCC2O43543 280 aa5.69□□□□□ -1.5
CHRNA3-204ENST00000559002 GPRIN2O60269 458 aa5.69□□□□□ -1.5
CHRNA3-204ENST00000559002 ICMTO60725 284 aa5.69□□□□□ -1.5
CHRNA3-204ENST00000559002 ATE1O95260 518 aa5.69□□□□□ -1.5
CHRNA3-204ENST00000559002 NGFP01138 241 aa5.69□□□□□ -1.5
CHRNA3-204ENST00000559002 TUBG1P23258 451 aa5.69□□□□□ -1.5
CHRNA3-204ENST00000559002 GLRXP35754 106 aa5.69□□□□□ -1.5
CHRNA3-204ENST00000559002 MAP2K4P45985 399 aa5.69□□□□□ -1.5
CHRNA3-204ENST00000559002 MMP16P51512 607 aa5.69□□□□□ -1.5
CHRNA3-204ENST00000559002 CDH15P55291 814 aa5.69□□□□□ -1.5
CHRNA3-204ENST00000559002 TAS2R43P59537 309 aa5.69□□□□□ -1.5
CHRNA3-204ENST00000559002 SELENOVP59797 346 aa5.69□□□□□ -1.5
CHRNA3-204ENST00000559002 NKX6-1P78426 367 aaPredicted RBP5.69□□□□□ -1.5
CHRNA3-204ENST00000559002 TLE4Q04727 773 aa5.69□□□□□ -1.5
CHRNA3-204ENST00000559002 HGFACQ04756 655 aa5.69□□□□□ -1.5
CHRNA3-204ENST00000559002 MFGE8Q08431 387 aaPredicted RBP5.69□□□□□ -1.5
CHRNA3-204ENST00000559002 IRF3Q14653 427 aa5.69□□□□□ -1.5
CHRNA3-204ENST00000559002 MED22Q15528 200 aa5.69□□□□□ -1.5
CHRNA3-204ENST00000559002 TBCEQ15813 527 aaPredicted RBP5.69□□□□□ -1.5
CHRNA3-204ENST00000559002 TIGD6Q17RP2 521 aa5.69□□□□□ -1.5
CHRNA3-204ENST00000559002 RSPO1Q2MKA7 263 aaPredicted RBP5.69□□□□□ -1.5
CHRNA3-204ENST00000559002 SNAI3Q3KNW1 292 aa5.69□□□□□ -1.5
CHRNA3-204ENST00000559002 ZNF718Q3SXZ3 478 aa5.69□□□□□ -1.5
CHRNA3-204ENST00000559002 ZNF672Q499Z4 452 aaPredicted RBP5.69□□□□□ -1.5
CHRNA3-204ENST00000559002 SPATA46Q5T0L3 261 aa5.69□□□□□ -1.5
CHRNA3-204ENST00000559002 ZNF684Q5T5D7 378 aa5.69□□□□□ -1.5
CHRNA3-204ENST00000559002 RGS7BPQ6MZT1 257 aaPredicted RBP5.69□□□□□ -1.5
CHRNA3-204ENST00000559002 ZNF773Q6PK81 442 aa5.69□□□□□ -1.5
CHRNA3-204ENST00000559002 MRPL21Q7Z2W9 205 aaKnown RBP5.69□□□□□ -1.5
CHRNA3-204ENST00000559002 NAA40Q86UY6 237 aa5.69□□□□□ -1.5
CHRNA3-204ENST00000559002 CATSPERDQ86XM0 798 aa5.69□□□□□ -1.5
CHRNA3-204ENST00000559002 ZNF101Q8IZC7 436 aa5.69□□□□□ -1.5
CHRNA3-204ENST00000559002 NANOGP1Q8N7R0 232 aa5.69□□□□□ -1.5
CHRNA3-204ENST00000559002 TSPAN14Q8NG11 270 aa5.69□□□□□ -1.5
CHRNA3-204ENST00000559002 OR8B12Q8NGG6 310 aa5.69□□□□□ -1.5
CHRNA3-204ENST00000559002 OR52H1Q8NGJ2 320 aa5.69□□□□□ -1.5
CHRNA3-204ENST00000559002 SLC25A40Q8TBP6 338 aa5.69□□□□□ -1.5
CHRNA3-204ENST00000559002 GATAD2BQ8WXI9 593 aa5.69□□□□□ -1.5
CHRNA3-204ENST00000559002 AKAP1Q92667 903 aaKnown RBP eCLIP5.69□□□□□ -1.5
CHRNA3-204ENST00000559002 FBXW5Q969U6 566 aa5.69□□□□□ -1.5
CHRNA3-204ENST00000559002 PELI1Q96FA3 418 aa5.69□□□□□ -1.5
CHRNA3-204ENST00000559002 SIGLEC11Q96RL6 698 aa5.69□□□□□ -1.5
CHRNA3-204ENST00000559002 ZNF649Q9BS31 505 aa5.69□□□□□ -1.5
CHRNA3-204ENST00000559002 TMEM204Q9BSN7 226 aa5.69□□□□□ -1.5
CHRNA3-204ENST00000559002 PBOV1Q9GZY1 135 aa5.69□□□□□ -1.5
CHRNA3-204ENST00000559002 COMMD4Q9H0A8 199 aa5.69□□□□□ -1.5
CHRNA3-204ENST00000559002 OPA3Q9H6K4 179 aa5.69□□□□□ -1.5
CHRNA3-204ENST00000559002 ZNF696Q9H7X3 374 aa5.69□□□□□ -1.5
CHRNA3-204ENST00000559002 TUBG2Q9NRH3 451 aa5.69□□□□□ -1.5
CHRNA3-204ENST00000559002 CA10Q9NS85 328 aa5.69□□□□□ -1.5
CHRNA3-204ENST00000559002 FAIMQ9NVQ4 179 aa5.69□□□□□ -1.5
CHRNA3-204ENST00000559002 FAM206AQ9NX38 181 aa5.69□□□□□ -1.5
CHRNA3-204ENST00000559002 BABAM2Q9NXR7 383 aa5.69□□□□□ -1.5
CHRNA3-204ENST00000559002 CISD1Q9NZ45 108 aaKnown RBP5.69□□□□□ -1.5
CHRNA3-204ENST00000559002 PTTG3PQ9NZH4 202 aa5.69□□□□□ -1.5
CHRNA3-204ENST00000559002 NUFIP1Q9UHK0 495 aaKnown RBP5.69□□□□□ -1.5
CHRNA3-204ENST00000559002 OR52A1Q9UKL2 312 aa5.69□□□□□ -1.5
CHRNA3-204ENST00000559002 STARD10Q9Y365 291 aa5.69□□□□□ -1.5
CHRNA3-204ENST00000559002 CMAHPQ9Y471 501 aa5.69□□□□□ -1.5
CHRNA3-204ENST00000559002 CRYBG3Q68DQ2 2970 aa5.69□□□□□ -1.5
CHRNA3-204ENST00000559002 CELSR2Q9HCU4 2923 aa5.68□□□□□ -1.5
CHRNA3-204ENST00000559002 PRR14LQ5THK1 2151 aa5.68□□□□□ -1.5
CHRNA3-204ENST00000559002 TRBV2A0A0J9YWF9 115 aa5.68□□□□□ -1.5
CHRNA3-204ENST00000559002 A0A1B0GVI7 797 aa5.68□□□□□ -1.5
CHRNA3-204ENST00000559002 A0A1W2PPW3 197 aa5.68□□□□□ -1.5
CHRNA3-204ENST00000559002 MAGEA13PA6NCF6 341 aa5.68□□□□□ -1.5
CHRNA3-204ENST00000559002 E7EQL1 145 aa5.68□□□□□ -1.5
CHRNA3-204ENST00000559002 H3BSA7 217 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms