RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 MPDU1O75352 247 aa2.81□□□□□ -1.96
CASC4-206ENST00000558847 VAMP5O95183 116 aa2.81□□□□□ -1.96
CASC4-206ENST00000558847 CISD3P0C7P0 127 aa2.81□□□□□ -1.96
CASC4-206ENST00000558847 GOLGA8HP0CJ92 632 aa2.81□□□□□ -1.96
CASC4-206ENST00000558847 HOXB8P17481 243 aaPredicted RBP2.81□□□□□ -1.96
CASC4-206ENST00000558847 PMCHP20382 165 aa2.81□□□□□ -1.96
CASC4-206ENST00000558847 NBL1P41271 181 aa2.81□□□□□ -1.96
CASC4-206ENST00000558847 RAB7AP51149 207 aa2.81□□□□□ -1.96
CASC4-206ENST00000558847 TAS2R39P59534 338 aa2.81□□□□□ -1.96
CASC4-206ENST00000558847 RPS23P62266 143 aaKnown RBP2.81□□□□□ -1.96
CASC4-206ENST00000558847 LRRC63Q05C16 580 aa2.81□□□□□ -1.96
CASC4-206ENST00000558847 C5orf64Q2M2E5 130 aa2.81□□□□□ -1.96
CASC4-206ENST00000558847 MLIPQ5VWP3 458 aa2.81□□□□□ -1.96
CASC4-206ENST00000558847 FAM71E1Q6IPT2 247 aa2.81□□□□□ -1.96
CASC4-206ENST00000558847 NANOGP8Q6NSW7 305 aa2.81□□□□□ -1.96
CASC4-206ENST00000558847 BHLHA15Q7RTS1 189 aaPredicted RBP2.81□□□□□ -1.96
CASC4-206ENST00000558847 SLC34A3Q8N130 599 aa2.81□□□□□ -1.96
CASC4-206ENST00000558847 TMEM104Q8NE00 496 aa2.81□□□□□ -1.96
CASC4-206ENST00000558847 OR10AD1Q8NGE0 317 aa2.81□□□□□ -1.96
CASC4-206ENST00000558847 OR5W2Q8NH69 310 aa2.81□□□□□ -1.96
CASC4-206ENST00000558847 COQ8AQ8NI60 647 aa2.81□□□□□ -1.96
CASC4-206ENST00000558847 C15orf40Q8WUR7 153 aa2.81□□□□□ -1.96
CASC4-206ENST00000558847 MITD1Q8WV92 249 aa2.81□□□□□ -1.96
CASC4-206ENST00000558847 ISOC2Q96AB3 205 aa2.81□□□□□ -1.96
CASC4-206ENST00000558847 HAUS1Q96CS2 278 aa2.81□□□□□ -1.96
CASC4-206ENST00000558847 COL21A1Q96P44 957 aa2.81□□□□□ -1.96
CASC4-206ENST00000558847 TEAD3Q99594 435 aa2.81□□□□□ -1.96
CASC4-206ENST00000558847 PATZ1Q9HBE1 687 aaKnown RBP2.81□□□□□ -1.96
CASC4-206ENST00000558847 MTFP1Q9UDX5 166 aa2.81□□□□□ -1.96
CASC4-206ENST00000558847 MTCL1Q9Y4B5 1905 aaKnown RBP2.81□□□□□ -1.96
CASC4-206ENST00000558847 COL16A1Q07092 1604 aaPredicted RBP2.8□□□□□ -1.96
CASC4-206ENST00000558847 A0A1B0GUH1 482 aa2.8□□□□□ -1.96
CASC4-206ENST00000558847 A0A1W2PPV4 95 aa2.8□□□□□ -1.96
CASC4-206ENST00000558847 A0A1W2PRF3 423 aa2.8□□□□□ -1.96
CASC4-206ENST00000558847 A0A1W2PRM7 423 aa2.8□□□□□ -1.96
CASC4-206ENST00000558847 SLC22A20A6NK97 555 aa2.8□□□□□ -1.96
CASC4-206ENST00000558847 GABRR3A8MPY1 467 aa2.8□□□□□ -1.96
CASC4-206ENST00000558847 DNASE2O00115 360 aaPredicted RBP2.8□□□□□ -1.96
CASC4-206ENST00000558847 GABRPO00591 440 aa2.8□□□□□ -1.96
CASC4-206ENST00000558847 TAAR5O14804 337 aa2.8□□□□□ -1.96
CASC4-206ENST00000558847 ZBTB5O15062 677 aa2.8□□□□□ -1.96
CASC4-206ENST00000558847 SIVA1O15304 175 aa2.8□□□□□ -1.96
CASC4-206ENST00000558847 NVLO15381 856 aaKnown RBP2.8□□□□□ -1.96
CASC4-206ENST00000558847 ENTPD5O75356 428 aa2.8□□□□□ -1.96
CASC4-206ENST00000558847 SLC22A5O76082 557 aa2.8□□□□□ -1.96
CASC4-206ENST00000558847 YIF1AO95070 293 aa2.8□□□□□ -1.96
CASC4-206ENST00000558847 TDP2O95551 362 aa2.8□□□□□ -1.96
CASC4-206ENST00000558847 CRYGCP07315 174 aa2.8□□□□□ -1.96
CASC4-206ENST00000558847 TLX1NBP0CAT3 122 aa2.8□□□□□ -1.96
CASC4-206ENST00000558847 CPN2P22792 545 aa2.8□□□□□ -1.96
CASC4-206ENST00000558847 GABRR2P28476 465 aa2.8□□□□□ -1.96
CASC4-206ENST00000558847 BMI1P35226 326 aa2.8□□□□□ -1.96
CASC4-206ENST00000558847 TALDO1P37837 337 aa2.8□□□□□ -1.96
CASC4-206ENST00000558847 RPS9P46781 194 aaKnown RBP2.8□□□□□ -1.96
CASC4-206ENST00000558847 PPOXP50336 477 aa2.8□□□□□ -1.96
CASC4-206ENST00000558847 CDKN2DP55273 166 aa2.8□□□□□ -1.96
CASC4-206ENST00000558847 PFN3P60673 137 aa2.8□□□□□ -1.96
CASC4-206ENST00000558847 ESRRGP62508 458 aa2.8□□□□□ -1.96
CASC4-206ENST00000558847 MADCAM1Q13477 382 aa2.8□□□□□ -1.96
CASC4-206ENST00000558847 CEMP1Q6PRD7 247 aaPredicted RBP2.8□□□□□ -1.96
CASC4-206ENST00000558847 NCCRP1Q6ZVX7 275 aaPredicted RBP2.8□□□□□ -1.96
CASC4-206ENST00000558847 KRTAP11-1Q8IUC1 163 aa2.8□□□□□ -1.96
CASC4-206ENST00000558847 CYB561D1Q8N8Q1 229 aa2.8□□□□□ -1.96
CASC4-206ENST00000558847 OR2L8Q8NGY9 312 aa2.8□□□□□ -1.96
CASC4-206ENST00000558847 PTX4Q96A99 478 aa2.8□□□□□ -1.96
CASC4-206ENST00000558847 LINC00167Q96N53 147 aa2.8□□□□□ -1.96
CASC4-206ENST00000558847 TMEM27Q9HBJ8 222 aa2.8□□□□□ -1.96
CASC4-206ENST00000558847 ADA2Q9NZK5 511 aa2.8□□□□□ -1.96
CASC4-206ENST00000558847 COMMD3-BMI1R4GMX3 469 aa2.8□□□□□ -1.96
CASC4-206ENST00000558847 PRRC2AP48634 2157 aaKnown RBP2.8□□□□□ -1.96
CASC4-206ENST00000558847 ADAMTS13Q76LX8 1427 aa2.79□□□□□ -1.96
CASC4-206ENST00000558847 IGHV1OR15-9A0A0B4J2B8 117 aa2.79□□□□□ -1.96
CASC4-206ENST00000558847 IGHV1-69DA0A0B4J2H0 117 aa2.79□□□□□ -1.96
CASC4-206ENST00000558847 TMEM223A0PJW6 202 aa2.79□□□□□ -1.96
CASC4-206ENST00000558847 BPY2O14599 106 aa2.79□□□□□ -1.96
CASC4-206ENST00000558847 RAD1O60671 282 aa2.79□□□□□ -1.96
CASC4-206ENST00000558847 SCELO95171 688 aa2.79□□□□□ -1.96
CASC4-206ENST00000558847 CTDNEP1O95476 244 aa2.79□□□□□ -1.96
CASC4-206ENST00000558847 MBP02144 154 aa2.79□□□□□ -1.96
CASC4-206ENST00000558847 OR8U9P0C7N5 309 aa2.79□□□□□ -1.96
CASC4-206ENST00000558847 STAG3L2P0CL84 134 aa2.79□□□□□ -1.96
CASC4-206ENST00000558847 PGA5P0DJD9 388 aa2.79□□□□□ -1.96
CASC4-206ENST00000558847 ZNF823P16415 610 aa2.79□□□□□ -1.96
CASC4-206ENST00000558847 IGFBP3P17936 291 aaPredicted RBP2.79□□□□□ -1.96
CASC4-206ENST00000558847 PCK1P35558 622 aa2.79□□□□□ -1.96
CASC4-206ENST00000558847 PPICP45877 212 aa2.79□□□□□ -1.96
CASC4-206ENST00000558847 OR1G1P47890 313 aa2.79□□□□□ -1.96
CASC4-206ENST00000558847 ERFP50548 548 aa2.79□□□□□ -1.96
CASC4-206ENST00000558847 LCN2P80188 198 aa2.79□□□□□ -1.96
CASC4-206ENST00000558847 SLC39A6Q13433 755 aa2.79□□□□□ -1.96
CASC4-206ENST00000558847 DGCR6Q14129 220 aa2.79□□□□□ -1.96
CASC4-206ENST00000558847 ZNF829Q3KNS6 432 aaPredicted RBP2.79□□□□□ -1.96
CASC4-206ENST00000558847 FBXW9Q5XUX1 488 aa2.79□□□□□ -1.96
CASC4-206ENST00000558847 DNAJC24Q6P3W2 148 aa2.79□□□□□ -1.96
CASC4-206ENST00000558847 TMPRSS11AQ6ZMR5 421 aa2.79□□□□□ -1.96
CASC4-206ENST00000558847 SLC35D2Q76EJ3 337 aa2.79□□□□□ -1.96
CASC4-206ENST00000558847 NKAIN4Q8IVV8 208 aa2.79□□□□□ -1.96
CASC4-206ENST00000558847 TRAM1L1Q8N609 369 aa2.79□□□□□ -1.96
CASC4-206ENST00000558847 CSGALNACT2Q8N6G5 542 aa2.79□□□□□ -1.96
CASC4-206ENST00000558847 C11orf72Q8NBR9 251 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms