RNA–Protein interactions for RNA: ENST00000558735.1

CASC4-205, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 427 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-205ENST00000558735 NOS3P29474 1203 aa9.64□□□□□ -0.87
CASC4-205ENST00000558735 RRM2P31350 389 aa9.64□□□□□ -0.87
CASC4-205ENST00000558735 SRP9P49458 86 aaKnown RBP9.64□□□□□ -0.87
CASC4-205ENST00000558735 UBA52P62987 128 aaKnown RBP9.64□□□□□ -0.87
CASC4-205ENST00000558735 TSPAN31Q12999 210 aa9.64□□□□□ -0.87
CASC4-205ENST00000558735 ECH1Q13011 328 aa9.64□□□□□ -0.87
CASC4-205ENST00000558735 MAB21L1Q13394 359 aa9.64□□□□□ -0.87
CASC4-205ENST00000558735 GK2Q14410 553 aaPredicted RBP9.64□□□□□ -0.87
CASC4-205ENST00000558735 ZNF181Q2M3W8 571 aa9.64□□□□□ -0.87
CASC4-205ENST00000558735 SLC36A3Q495N2 470 aa9.64□□□□□ -0.87
CASC4-205ENST00000558735 ESCO2Q56NI9 601 aa9.64□□□□□ -0.87
CASC4-205ENST00000558735 SAMD4BQ5PRF9 694 aaKnown RBP9.64□□□□□ -0.87
CASC4-205ENST00000558735 PGBD2Q6P3X8 592 aa9.64□□□□□ -0.87
CASC4-205ENST00000558735 TREML4Q6UXN2 200 aa9.64□□□□□ -0.87
CASC4-205ENST00000558735 MOGAT3Q86VF5 341 aa9.64□□□□□ -0.87
CASC4-205ENST00000558735 SIGLECL1Q8N7X8 197 aa9.64□□□□□ -0.87
CASC4-205ENST00000558735 BHLHE23Q8NDY6 225 aa9.64□□□□□ -0.87
CASC4-205ENST00000558735 SDR9C7Q8NEX9 313 aa9.64□□□□□ -0.87
CASC4-205ENST00000558735 OR2AJ1Q8NGZ0 328 aa9.64□□□□□ -0.87
CASC4-205ENST00000558735 MCUR1Q96AQ8 359 aa9.64□□□□□ -0.87
CASC4-205ENST00000558735 SLCO4A1Q96BD0 722 aa9.64□□□□□ -0.87
CASC4-205ENST00000558735 NSMCE2Q96MF7 247 aa9.64□□□□□ -0.87
CASC4-205ENST00000558735 TMEM246Q9BRR3 403 aa9.64□□□□□ -0.87
CASC4-205ENST00000558735 HCAR1Q9BXC0 346 aa9.64□□□□□ -0.87
CASC4-205ENST00000558735 DDX28Q9NUL7 540 aaKnown RBP9.64□□□□□ -0.87
CASC4-205ENST00000558735 TMCC3Q9ULS5 477 aa9.64□□□□□ -0.87
CASC4-205ENST00000558735 PPIAL4AQ9Y536 164 aa9.64□□□□□ -0.87
CASC4-205ENST00000558735 PCDHGB1Q9Y5G3 927 aa9.64□□□□□ -0.87
CASC4-205ENST00000558735 GASTP01350 101 aa9.63□□□□□ -0.87
CASC4-205ENST00000558735 LCATP04180 440 aa9.63□□□□□ -0.87
CASC4-205ENST00000558735 ANOS1P23352 680 aa9.63□□□□□ -0.87
CASC4-205ENST00000558735 CPT2P23786 658 aa9.63□□□□□ -0.87
CASC4-205ENST00000558735 PYCR1P32322 319 aa9.63□□□□□ -0.87
CASC4-205ENST00000558735 IFNGR2P38484 337 aa9.63□□□□□ -0.87
CASC4-205ENST00000558735 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.63□□□□□ -0.87
CASC4-205ENST00000558735 TRAP1Q12931 704 aaKnown RBP9.63□□□□□ -0.87
CASC4-205ENST00000558735 LYPD2Q6UXB3 125 aa9.63□□□□□ -0.87
CASC4-205ENST00000558735 ZNF620Q6ZNG0 422 aa9.63□□□□□ -0.87
CASC4-205ENST00000558735 DOK3Q7L591 496 aa9.63□□□□□ -0.87
CASC4-205ENST00000558735 PIGWQ7Z7B1 504 aa9.63□□□□□ -0.87
CASC4-205ENST00000558735 KLBQ86Z14 1044 aa9.63□□□□□ -0.87
CASC4-205ENST00000558735 ZDHHC21Q8IVQ6 265 aa9.63□□□□□ -0.87
CASC4-205ENST00000558735 MUC20Q8N307 709 aaPredicted RBP9.63□□□□□ -0.87
CASC4-205ENST00000558735 CYB561A3Q8NBI2 242 aa9.63□□□□□ -0.87
CASC4-205ENST00000558735 OR10S1Q8NGN2 331 aa9.63□□□□□ -0.87
CASC4-205ENST00000558735 DACT3Q96B18 629 aaPredicted RBP9.63□□□□□ -0.87
CASC4-205ENST00000558735 C1orf147Q96MC9 270 aaPredicted RBP9.63□□□□□ -0.87
CASC4-205ENST00000558735 ZNF48Q96MX3 618 aaPredicted RBP9.63□□□□□ -0.87
CASC4-205ENST00000558735 ATF6BQ99941 703 aa9.63□□□□□ -0.87
CASC4-205ENST00000558735 EGLN3Q9H6Z9 239 aa9.63□□□□□ -0.87
CASC4-205ENST00000558735 IL20Q9NYY1 176 aa9.63□□□□□ -0.87
CASC4-205ENST00000558735 MIOXQ9UGB7 285 aa9.63□□□□□ -0.87
CASC4-205ENST00000558735 TAGLN3Q9UI15 199 aa9.63□□□□□ -0.87
CASC4-205ENST00000558735 LRCH1Q9Y2L9 728 aa9.63□□□□□ -0.87
CASC4-205ENST00000558735 SOX21Q9Y651 276 aaPredicted RBP9.63□□□□□ -0.87
CASC4-205ENST00000558735 KIR2DS1A0A191URI9 304 aa9.62□□□□□ -0.87
CASC4-205ENST00000558735 C5orf63A6NC05 138 aa9.62□□□□□ -0.87
CASC4-205ENST00000558735 BHLHE40O14503 412 aa9.62□□□□□ -0.87
CASC4-205ENST00000558735 KRT36O76013 467 aa9.62□□□□□ -0.87
CASC4-205ENST00000558735 HLA-DQA2P01906 255 aa9.62□□□□□ -0.87
CASC4-205ENST00000558735 PRTN3P24158 256 aa9.62□□□□□ -0.87
CASC4-205ENST00000558735 RPS27P42677 84 aaKnown RBP9.62□□□□□ -0.87
CASC4-205ENST00000558735 GATA4P43694 442 aa9.62□□□□□ -0.87
CASC4-205ENST00000558735 GYS2P54840 703 aa9.62□□□□□ -0.87
CASC4-205ENST00000558735 TPTEP56180 551 aa9.62□□□□□ -0.87
CASC4-205ENST00000558735 MPPED2Q15777 294 aa9.62□□□□□ -0.87
CASC4-205ENST00000558735 ZNF404Q494X3 552 aa9.62□□□□□ -0.87
CASC4-205ENST00000558735 ARMCX4Q5H9R4 360 aa9.62□□□□□ -0.87
CASC4-205ENST00000558735 CLEC12AQ5QGZ9 265 aa9.62□□□□□ -0.87
CASC4-205ENST00000558735 ZNF770Q6IQ21 691 aaPredicted RBP9.62□□□□□ -0.87
CASC4-205ENST00000558735 RBMS3Q6XE24 437 aaKnown RBP9.62□□□□□ -0.87
CASC4-205ENST00000558735 PGAP1Q75T13 922 aa9.62□□□□□ -0.87
CASC4-205ENST00000558735 DEFB107AQ8IZN7 70 aa9.62□□□□□ -0.87
CASC4-205ENST00000558735 RAB40AQ8WXH6 277 aa9.62□□□□□ -0.87
CASC4-205ENST00000558735 DUX5Q96PT3 197 aa9.62□□□□□ -0.87
CASC4-205ENST00000558735 BTBD10Q9BSF8 475 aa9.62□□□□□ -0.87
CASC4-205ENST00000558735 MRI1Q9BV20 369 aa9.62□□□□□ -0.87
CASC4-205ENST00000558735 SSBP3Q9BWW4 388 aaPredicted RBP9.62□□□□□ -0.87
CASC4-205ENST00000558735 NSRP1Q9H0G5 558 aaKnown RBP9.62□□□□□ -0.87
CASC4-205ENST00000558735 LYVE1Q9Y5Y7 322 aa9.62□□□□□ -0.87
CASC4-205ENST00000558735 TVP23AA6NH52 213 aa9.61□□□□□ -0.87
CASC4-205ENST00000558735 LRRC30A6NM36 301 aa9.61□□□□□ -0.87
CASC4-205ENST00000558735 CD300LBA8K4G0 201 aa9.61□□□□□ -0.87
CASC4-205ENST00000558735 TNFRSF11BO00300 401 aa9.61□□□□□ -0.87
CASC4-205ENST00000558735 PPIAL4GP0DN37 164 aa9.61□□□□□ -0.87
CASC4-205ENST00000558735 IGHV4-38-2P0DP08 117 aa9.61□□□□□ -0.87
CASC4-205ENST00000558735 PSKH1P11801 424 aa9.61□□□□□ -0.87
CASC4-205ENST00000558735 RPS2P15880 293 aaKnown RBP9.61□□□□□ -0.87
CASC4-205ENST00000558735 ZNF823P16415 610 aa9.61□□□□□ -0.87
CASC4-205ENST00000558735 OTX1P32242 354 aaPredicted RBP9.61□□□□□ -0.87
CASC4-205ENST00000558735 RAD23AP54725 363 aa9.61□□□□□ -0.87
CASC4-205ENST00000558735 GNB2P62879 340 aa9.61□□□□□ -0.87
CASC4-205ENST00000558735 HOXA4Q00056 320 aaPredicted RBP9.61□□□□□ -0.87
CASC4-205ENST00000558735 ZNF92Q03936 586 aa9.61□□□□□ -0.87
CASC4-205ENST00000558735 PPP1R8Q12972 351 aaKnown RBP9.61□□□□□ -0.87
CASC4-205ENST00000558735 MALLQ13021 153 aa9.61□□□□□ -0.87
CASC4-205ENST00000558735 SNAI3Q3KNW1 292 aa9.61□□□□□ -0.87
CASC4-205ENST00000558735 SPATS1Q496A3 300 aa9.61□□□□□ -0.87
CASC4-205ENST00000558735 LYPD4Q6UWN0 246 aa9.61□□□□□ -0.87
CASC4-205ENST00000558735 CYP2R1Q6VVX0 501 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms