RNA–Protein interactions for RNA: ENST00000558469.5

CUX1-216, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-216ENST00000558469 FAM222BQ8WU58 562 aa8.31□□□□□ -1.08
CUX1-216ENST00000558469 RORBQ92753 470 aa8.31□□□□□ -1.08
CUX1-216ENST00000558469 PIK3IP1Q96FE7 263 aa8.31□□□□□ -1.08
CUX1-216ENST00000558469 ACOT13Q9NPJ3 140 aa8.31□□□□□ -1.08
CUX1-216ENST00000558469 FAM206AQ9NX38 181 aa8.31□□□□□ -1.08
CUX1-216ENST00000558469 BABAM2Q9NXR7 383 aa8.31□□□□□ -1.08
CUX1-216ENST00000558469 EIF3KQ9UBQ5 218 aaKnown RBP8.31□□□□□ -1.08
CUX1-216ENST00000558469 LSM2Q9Y333 95 aaKnown RBP8.31□□□□□ -1.08
CUX1-216ENST00000558469 R4GMQ9 66 aa8.31□□□□□ -1.08
CUX1-216ENST00000558469 ICE1Q9Y2F5 2266 aa8.31□□□□□ -1.08
CUX1-216ENST00000558469 DOPEY2Q9Y3R5 2298 aa8.3□□□□□ -1.08
CUX1-216ENST00000558469 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.3□□□□□ -1.08
CUX1-216ENST00000558469 DEFB108AA8MXU0 73 aa8.3□□□□□ -1.08
CUX1-216ENST00000558469 ATP6V1G2-DDX39BF2Z307 99 aa8.3□□□□□ -1.08
CUX1-216ENST00000558469 LOC110117498-PIK3R3F6TDL0 507 aa8.3□□□□□ -1.08
CUX1-216ENST00000558469 LCE2BO14633 110 aa8.3□□□□□ -1.08
CUX1-216ENST00000558469 SIAH2O43255 324 aa8.3□□□□□ -1.08
CUX1-216ENST00000558469 TBX1O43435 398 aa8.3□□□□□ -1.08
CUX1-216ENST00000558469 LALBAP00709 142 aa8.3□□□□□ -1.08
CUX1-216ENST00000558469 NGFP01138 241 aa8.3□□□□□ -1.08
CUX1-216ENST00000558469 LCKP06239 509 aa8.3□□□□□ -1.08
CUX1-216ENST00000558469 CD3EP07766 207 aa8.3□□□□□ -1.08
CUX1-216ENST00000558469 HSMCR30P0CW71 290 aa8.3□□□□□ -1.08
CUX1-216ENST00000558469 ANOS1P23352 680 aa8.3□□□□□ -1.08
CUX1-216ENST00000558469 PCSK6P29122 969 aa8.3□□□□□ -1.08
CUX1-216ENST00000558469 RGS6P49758 472 aa8.3□□□□□ -1.08
CUX1-216ENST00000558469 UCP2P55851 309 aa8.3□□□□□ -1.08
CUX1-216ENST00000558469 NANOS3P60323 173 aaKnown RBP8.3□□□□□ -1.08
CUX1-216ENST00000558469 PSMA6P60900 246 aaKnown RBP8.3□□□□□ -1.08
CUX1-216ENST00000558469 PRR20EP86478 221 aa8.3□□□□□ -1.08
CUX1-216ENST00000558469 PRR20CP86479 221 aa8.3□□□□□ -1.08
CUX1-216ENST00000558469 PRR20DP86480 221 aa8.3□□□□□ -1.08
CUX1-216ENST00000558469 PRR20BP86481 221 aa8.3□□□□□ -1.08
CUX1-216ENST00000558469 PRR20AP86496 221 aa8.3□□□□□ -1.08
CUX1-216ENST00000558469 DOC2BQ14184 412 aa8.3□□□□□ -1.08
CUX1-216ENST00000558469 NEDD8Q15843 81 aa8.3□□□□□ -1.08
CUX1-216ENST00000558469 ODF4Q2M2E3 257 aa8.3□□□□□ -1.08
CUX1-216ENST00000558469 SNAI3Q3KNW1 292 aa8.3□□□□□ -1.08
CUX1-216ENST00000558469 BEX5Q5H9J7 111 aa8.3□□□□□ -1.08
CUX1-216ENST00000558469 BCL2L15Q5TBC7 163 aa8.3□□□□□ -1.08
CUX1-216ENST00000558469 SP5Q6BEB4 398 aaPredicted RBP8.3□□□□□ -1.08
CUX1-216ENST00000558469 XAF1Q6GPH4 301 aa8.3□□□□□ -1.08
CUX1-216ENST00000558469 SLC22A25Q6T423 547 aa8.3□□□□□ -1.08
CUX1-216ENST00000558469 KCTD8Q6ZWB6 473 aa8.3□□□□□ -1.08
CUX1-216ENST00000558469 CATSPERDQ86XM0 798 aa8.3□□□□□ -1.08
CUX1-216ENST00000558469 ZNF101Q8IZC7 436 aa8.3□□□□□ -1.08
CUX1-216ENST00000558469 ZFP41Q8N8Y5 198 aa8.3□□□□□ -1.08
CUX1-216ENST00000558469 ACBD4Q8NC06 268 aa8.3□□□□□ -1.08
CUX1-216ENST00000558469 ABHD4Q8TB40 342 aa8.3□□□□□ -1.08
CUX1-216ENST00000558469 PPP1R14AQ96A00 147 aa8.3□□□□□ -1.08
CUX1-216ENST00000558469 APOBEC3DQ96AK3 386 aaPredicted RBP8.3□□□□□ -1.08
CUX1-216ENST00000558469 PGAM5Q96HS1 289 aa8.3□□□□□ -1.08
CUX1-216ENST00000558469 SPOCK3Q9BQ16 436 aa8.3□□□□□ -1.08
CUX1-216ENST00000558469 C1QTNF5Q9BXJ0 243 aa8.3□□□□□ -1.08
CUX1-216ENST00000558469 PBOV1Q9GZY1 135 aa8.3□□□□□ -1.08
CUX1-216ENST00000558469 SP140LQ9H930 580 aa8.3□□□□□ -1.08
CUX1-216ENST00000558469 TRIM36Q9NQ86 728 aa8.3□□□□□ -1.08
CUX1-216ENST00000558469 G6PC2Q9NQR9 355 aa8.3□□□□□ -1.08
CUX1-216ENST00000558469 FRRS1LQ9P0K9 344 aa8.3□□□□□ -1.08
CUX1-216ENST00000558469 OR52A1Q9UKL2 312 aa8.3□□□□□ -1.08
CUX1-216ENST00000558469 SPEF1Q9Y4P9 236 aa8.3□□□□□ -1.08
CUX1-216ENST00000558469 HRNRQ86YZ3 2850 aaPredicted RBP8.29□□□□□ -1.08
CUX1-216ENST00000558469 TRBV2A0A0J9YWF9 115 aa8.29□□□□□ -1.08
CUX1-216ENST00000558469 PNMA8CA0A1B0GUJ8 204 aa8.29□□□□□ -1.08
CUX1-216ENST00000558469 C5orf63A6NC05 138 aa8.29□□□□□ -1.08
CUX1-216ENST00000558469 ACOD1A6NK06 481 aa8.29□□□□□ -1.08
CUX1-216ENST00000558469 SMPD2O60906 423 aa8.29□□□□□ -1.08
CUX1-216ENST00000558469 SMIM18P0DKX4 95 aa8.29□□□□□ -1.08
CUX1-216ENST00000558469 NR4A1P22736 598 aa8.29□□□□□ -1.08
CUX1-216ENST00000558469 RAD52P43351 418 aa8.29□□□□□ -1.08
CUX1-216ENST00000558469 KIR3DL2P43630 455 aa8.29□□□□□ -1.08
CUX1-216ENST00000558469 TGM4P49221 684 aa8.29□□□□□ -1.08
CUX1-216ENST00000558469 NR1H2P55055 460 aa8.29□□□□□ -1.08
CUX1-216ENST00000558469 MRPL28Q13084 256 aaKnown RBP8.29□□□□□ -1.08
CUX1-216ENST00000558469 ALKBH1Q13686 389 aaKnown RBP8.29□□□□□ -1.08
CUX1-216ENST00000558469 GFOD2Q3B7J2 385 aa8.29□□□□□ -1.08
CUX1-216ENST00000558469 CCDC58Q4VC31 144 aa8.29□□□□□ -1.08
CUX1-216ENST00000558469 WDR38Q5JTN6 314 aa8.29□□□□□ -1.08
CUX1-216ENST00000558469 UBE2UQ5VVX9 321 aa8.29□□□□□ -1.08
CUX1-216ENST00000558469 ADAM5Q6NVV9 412 aa8.29□□□□□ -1.08
CUX1-216ENST00000558469 ZNF544Q6NX49 715 aa8.29□□□□□ -1.08
CUX1-216ENST00000558469 FDX2Q6P4F2 183 aa8.29□□□□□ -1.08
CUX1-216ENST00000558469 RPL22L1Q6P5R6 122 aaKnown RBP8.29□□□□□ -1.08
CUX1-216ENST00000558469 RFPL4BQ6ZWI9 263 aa8.29□□□□□ -1.08
CUX1-216ENST00000558469 ZNF367Q7RTV3 350 aa8.29□□□□□ -1.08
CUX1-216ENST00000558469 PRSS45Q7RTY3 260 aa8.29□□□□□ -1.08
CUX1-216ENST00000558469 PRSS35Q8N3Z0 413 aa8.29□□□□□ -1.08
CUX1-216ENST00000558469 OR8B12Q8NGG6 310 aa8.29□□□□□ -1.08
CUX1-216ENST00000558469 OR52H1Q8NGJ2 320 aa8.29□□□□□ -1.08
CUX1-216ENST00000558469 OR5L1Q8NGL2 311 aa8.29□□□□□ -1.08
CUX1-216ENST00000558469 OR1J1Q8NGS3 322 aa8.29□□□□□ -1.08
CUX1-216ENST00000558469 OR2G2Q8NGZ5 317 aa8.29□□□□□ -1.08
CUX1-216ENST00000558469 HAVCR2Q8TDQ0 301 aa8.29□□□□□ -1.08
CUX1-216ENST00000558469 FCGR1BQ92637 280 aa8.29□□□□□ -1.08
CUX1-216ENST00000558469 MGLLQ99685 303 aa8.29□□□□□ -1.08
CUX1-216ENST00000558469 MRPS26Q9BYN8 205 aaKnown RBP8.29□□□□□ -1.08
CUX1-216ENST00000558469 OR10A2Q9H208 303 aa8.29□□□□□ -1.08
CUX1-216ENST00000558469 MOB1AQ9H8S9 216 aa8.29□□□□□ -1.08
CUX1-216ENST00000558469 VCX3AQ9NNX9 186 aa8.29□□□□□ -1.08
CUX1-216ENST00000558469 TBCCD1Q9NVR7 557 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms