RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 EMC3Q9P0I2 261 aa9.05□□□□□ -0.96
TPM1-212ENST00000558347 HDGFL3Q9Y3E1 203 aa9.05□□□□□ -0.96
TPM1-212ENST00000558347 PRRC2AP48634 2157 aaKnown RBP9.05□□□□□ -0.96
TPM1-212ENST00000558347 IGHV3-15A0A0B4J1V0 119 aa9.05□□□□□ -0.96
TPM1-212ENST00000558347 GJE1A6NN92 205 aa9.05□□□□□ -0.96
TPM1-212ENST00000558347 ZNF879B4DU55 563 aa9.05□□□□□ -0.96
TPM1-212ENST00000558347 PDCD5O14737 125 aa9.05□□□□□ -0.96
TPM1-212ENST00000558347 ALX3O95076 343 aa9.05□□□□□ -0.96
TPM1-212ENST00000558347 RAF1P04049 648 aa9.05□□□□□ -0.96
TPM1-212ENST00000558347 HIST1H2ABP04908 130 aa9.05□□□□□ -0.96
TPM1-212ENST00000558347 THBDP07204 575 aa9.05□□□□□ -0.96
TPM1-212ENST00000558347 MRPL3P09001 348 aaKnown RBP9.05□□□□□ -0.96
TPM1-212ENST00000558347 APEHP13798 732 aaKnown RBP9.05□□□□□ -0.96
TPM1-212ENST00000558347 KLK2P20151 261 aa9.05□□□□□ -0.96
TPM1-212ENST00000558347 ENPP1P22413 925 aa9.05□□□□□ -0.96
TPM1-212ENST00000558347 PYCR1P32322 319 aa9.05□□□□□ -0.96
TPM1-212ENST00000558347 GDI2P50395 445 aaKnown RBP9.05□□□□□ -0.96
TPM1-212ENST00000558347 DYRK1AQ13627 763 aa9.05□□□□□ -0.96
TPM1-212ENST00000558347 THOC7Q6I9Y2 204 aaKnown RBP9.05□□□□□ -0.96
TPM1-212ENST00000558347 B3GLCTQ6Y288 498 aa9.05□□□□□ -0.96
TPM1-212ENST00000558347 HIST3H2AQ7L7L0 130 aa9.05□□□□□ -0.96
TPM1-212ENST00000558347 NUFIP2Q7Z417 695 aaKnown RBP9.05□□□□□ -0.96
TPM1-212ENST00000558347 TUSC5Q8IXB3 177 aa9.05□□□□□ -0.96
TPM1-212ENST00000558347 UBE2J2Q8N2K1 259 aa9.05□□□□□ -0.96
TPM1-212ENST00000558347 OR52E2Q8NGJ4 325 aa9.05□□□□□ -0.96
TPM1-212ENST00000558347 OR5J2Q8NH18 312 aa9.05□□□□□ -0.96
TPM1-212ENST00000558347 HIST1H2ACQ93077 130 aa9.05□□□□□ -0.96
TPM1-212ENST00000558347 ARL5BQ96KC2 179 aa9.05□□□□□ -0.96
TPM1-212ENST00000558347 HYLS1Q96M11 299 aa9.05□□□□□ -0.96
TPM1-212ENST00000558347 OR2M2Q96R28 347 aa9.05□□□□□ -0.96
TPM1-212ENST00000558347 NMNAT2Q9BZQ4 307 aa9.05□□□□□ -0.96
TPM1-212ENST00000558347 ABCG5Q9H222 651 aa9.05□□□□□ -0.96
TPM1-212ENST00000558347 PPIL3Q9H2H8 161 aaKnown RBP9.05□□□□□ -0.96
TPM1-212ENST00000558347 FANCFQ9NPI8 374 aa9.05□□□□□ -0.96
TPM1-212ENST00000558347 NRIP3Q9NQ35 241 aa9.05□□□□□ -0.96
TPM1-212ENST00000558347 ING1Q9UK53 422 aaPredicted RBP9.05□□□□□ -0.96
TPM1-212ENST00000558347 SPATA2Q9UM82 520 aa9.05□□□□□ -0.96
TPM1-212ENST00000558347 ARPC4-TTLL3A0A0A6YYG9 625 aa9.04□□□□□ -0.96
TPM1-212ENST00000558347 LIPT2A6NK58 231 aa9.04□□□□□ -0.96
TPM1-212ENST00000558347 IMPA2O14732 288 aa9.04□□□□□ -0.96
TPM1-212ENST00000558347 TPPPO94811 219 aa9.04□□□□□ -0.96
TPM1-212ENST00000558347 PMS2P2O95744 297 aa9.04□□□□□ -0.96
TPM1-212ENST00000558347 TFP02787 698 aa9.04□□□□□ -0.96
TPM1-212ENST00000558347 TFPIP10646 304 aa9.04□□□□□ -0.96
TPM1-212ENST00000558347 CLUP10909 449 aa9.04□□□□□ -0.96
TPM1-212ENST00000558347 HIST1H1CP16403 213 aaKnown RBP9.04□□□□□ -0.96
TPM1-212ENST00000558347 LOXP28300 417 aaPredicted RBP9.04□□□□□ -0.96
TPM1-212ENST00000558347 GRPRP30550 384 aa9.04□□□□□ -0.96
TPM1-212ENST00000558347 BTCP35070 178 aa9.04□□□□□ -0.96
TPM1-212ENST00000558347 SLC25A1P53007 311 aa9.04□□□□□ -0.96
TPM1-212ENST00000558347 OR10A3P58181 314 aa9.04□□□□□ -0.96
TPM1-212ENST00000558347 RAC3P60763 192 aa9.04□□□□□ -0.96
TPM1-212ENST00000558347 ZP4Q12836 540 aa9.04□□□□□ -0.96
TPM1-212ENST00000558347 RNPS1Q15287 305 aaKnown RBP9.04□□□□□ -0.96
TPM1-212ENST00000558347 UBE2NLQ5JXB2 153 aa9.04□□□□□ -0.96
TPM1-212ENST00000558347 CD276Q5ZPR3 534 aa9.04□□□□□ -0.96
TPM1-212ENST00000558347 TFAP2EQ6VUC0 442 aa9.04□□□□□ -0.96
TPM1-212ENST00000558347 ZNF782Q6ZMW2 699 aaPredicted RBP9.04□□□□□ -0.96
TPM1-212ENST00000558347 BEND4Q6ZU67 534 aa9.04□□□□□ -0.96
TPM1-212ENST00000558347 NANOGNBQ7Z5D8 188 aa9.04□□□□□ -0.96
TPM1-212ENST00000558347 GLCCI1Q86VQ1 547 aa9.04□□□□□ -0.96
TPM1-212ENST00000558347 CYB561A3Q8NBI2 242 aa9.04□□□□□ -0.96
TPM1-212ENST00000558347 ADPRHL1Q8NDY3 354 aa9.04□□□□□ -0.96
TPM1-212ENST00000558347 MBD6Q96DN6 1003 aa9.04□□□□□ -0.96
TPM1-212ENST00000558347 PELI1Q96FA3 418 aa9.04□□□□□ -0.96
TPM1-212ENST00000558347 PIK3IP1Q96FE7 263 aa9.04□□□□□ -0.96
TPM1-212ENST00000558347 HS3ST6Q96QI5 342 aa9.04□□□□□ -0.96
TPM1-212ENST00000558347 OR5B2Q96R09 309 aa9.04□□□□□ -0.96
TPM1-212ENST00000558347 DDOQ99489 341 aa9.04□□□□□ -0.96
TPM1-212ENST00000558347 ACTR6Q9GZN1 396 aa9.04□□□□□ -0.96
TPM1-212ENST00000558347 PLEKHA1Q9HB21 404 aa9.04□□□□□ -0.96
TPM1-212ENST00000558347 DIABLOQ9NR28 239 aa9.04□□□□□ -0.96
TPM1-212ENST00000558347 MCUBQ9NWR8 336 aa9.04□□□□□ -0.96
TPM1-212ENST00000558347 TAS2R5Q9NYW4 299 aa9.04□□□□□ -0.96
TPM1-212ENST00000558347 KLHL13Q9P2N7 655 aa9.04□□□□□ -0.96
TPM1-212ENST00000558347 NF1P21359 2839 aa9.03□□□□□ -0.96
TPM1-212ENST00000558347 MCIDASD6RGH6 385 aa9.03□□□□□ -0.96
TPM1-212ENST00000558347 PLPP3O14495 311 aa9.03□□□□□ -0.96
TPM1-212ENST00000558347 SMAD9O15198 467 aaKnown RBP9.03□□□□□ -0.96
TPM1-212ENST00000558347 DNPH1O43598 174 aa9.03□□□□□ -0.96
TPM1-212ENST00000558347 LANCL1O43813 399 aa9.03□□□□□ -0.96
TPM1-212ENST00000558347 ZNF780AO75290 641 aaPredicted RBP9.03□□□□□ -0.96
TPM1-212ENST00000558347 TXNDC12O95881 172 aa9.03□□□□□ -0.96
TPM1-212ENST00000558347 PAHP00439 452 aa9.03□□□□□ -0.96
TPM1-212ENST00000558347 STOMP27105 288 aa9.03□□□□□ -0.96
TPM1-212ENST00000558347 ACVR1BP36896 505 aa9.03□□□□□ -0.96
TPM1-212ENST00000558347 AQP2P41181 271 aa9.03□□□□□ -0.96
TPM1-212ENST00000558347 GNG2P59768 71 aa9.03□□□□□ -0.96
TPM1-212ENST00000558347 RPL18Q07020 188 aaKnown RBP9.03□□□□□ -0.96
TPM1-212ENST00000558347 MADCAM1Q13477 382 aa9.03□□□□□ -0.96
TPM1-212ENST00000558347 DEFB113Q30KQ7 82 aa9.03□□□□□ -0.96
TPM1-212ENST00000558347 SLC36A2Q495M3 483 aa9.03□□□□□ -0.96
TPM1-212ENST00000558347 ALG10Q5BKT4 473 aa9.03□□□□□ -0.96
TPM1-212ENST00000558347 Q5BKY6 102 aa9.03□□□□□ -0.96
TPM1-212ENST00000558347 CEP78Q5JTW2 689 aa9.03□□□□□ -0.96
TPM1-212ENST00000558347 FAM27D1Q5T7N8 215 aa9.03□□□□□ -0.96
TPM1-212ENST00000558347 TMPPEQ6ZT21 453 aa9.03□□□□□ -0.96
TPM1-212ENST00000558347 H1FNTQ75WM6 255 aaPredicted RBP9.03□□□□□ -0.96
TPM1-212ENST00000558347 SSX6Q7RTT6 188 aa9.03□□□□□ -0.96
TPM1-212ENST00000558347 KCTD20Q7Z5Y7 419 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms