RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 TEKQ02763 1124 aa12.71□□□□□ -0.37
SPG11-210ENST00000558319 OR2A2Q6IF42 318 aa12.71□□□□□ -0.37
SPG11-210ENST00000558319 ZNF595Q8IYB9 648 aa12.71□□□□□ -0.37
SPG11-210ENST00000558319 SLC37A2Q8TED4 501 aa12.71□□□□□ -0.37
SPG11-210ENST00000558319 ADRA2CP18825 462 aa12.71□□□□□ -0.38
SPG11-210ENST00000558319 LIM2P55344 173 aa12.71□□□□□ -0.38
SPG11-210ENST00000558319 SLC16A11Q8NCK7 471 aa12.71□□□□□ -0.38
SPG11-210ENST00000558319 NUDCD2Q8WVJ2 157 aa12.71□□□□□ -0.38
SPG11-210ENST00000558319 SPINT2O43291 252 aa12.71□□□□□ -0.38
SPG11-210ENST00000558319 IGHV3-13P01766 116 aa12.71□□□□□ -0.38
SPG11-210ENST00000558319 IGHV3-7P01780 117 aa12.71□□□□□ -0.38
SPG11-210ENST00000558319 DOC2BQ14184 412 aa12.71□□□□□ -0.38
SPG11-210ENST00000558319 OR51E1Q8TCB6 317 aa12.71□□□□□ -0.38
SPG11-210ENST00000558319 PPP1R1CQ8WVI7 109 aa12.71□□□□□ -0.38
SPG11-210ENST00000558319 WBP2Q969T9 261 aa12.71□□□□□ -0.38
SPG11-210ENST00000558319 TEAD3Q99594 435 aa12.71□□□□□ -0.38
SPG11-210ENST00000558319 MARCH5Q9NX47 278 aa12.71□□□□□ -0.38
SPG11-210ENST00000558319 GPR171O14626 319 aa12.7□□□□□ -0.38
SPG11-210ENST00000558319 DCTDP32321 178 aa12.7□□□□□ -0.38
SPG11-210ENST00000558319 ERVFC1-1P60608 527 aa12.7□□□□□ -0.38
SPG11-210ENST00000558319 SNRPGP62308 76 aaKnown RBP12.7□□□□□ -0.38
SPG11-210ENST00000558319 ACSM5Q6NUN0 579 aa12.7□□□□□ -0.38
SPG11-210ENST00000558319 ZNF66Q6ZN08 573 aa12.7□□□□□ -0.38
SPG11-210ENST00000558319 PRSS42Q7Z5A4 293 aa12.7□□□□□ -0.38
SPG11-210ENST00000558319 MRPS2Q9Y399 296 aaKnown RBP12.7□□□□□ -0.38
SPG11-210ENST00000558319 OR51B4Q9Y5P0 310 aa12.7□□□□□ -0.38
SPG11-210ENST00000558319 LINC01553A4QN01 128 aa12.7□□□□□ -0.38
SPG11-210ENST00000558319 GPR31O00270 319 aa12.7□□□□□ -0.38
SPG11-210ENST00000558319 CSN1S1P47710 185 aa12.7□□□□□ -0.38
SPG11-210ENST00000558319 RANP62826 216 aaKnown RBP12.7□□□□□ -0.38
SPG11-210ENST00000558319 C17orf67Q0P5P2 114 aa12.7□□□□□ -0.38
SPG11-210ENST00000558319 MPPED2Q15777 294 aa12.7□□□□□ -0.38
SPG11-210ENST00000558319 RNASEKQ6P5S7 137 aaKnown RBP12.7□□□□□ -0.38
SPG11-210ENST00000558319 EPHX3Q9H6B9 360 aa12.7□□□□□ -0.38
SPG11-210ENST00000558319 SIRT3Q9NTG7 399 aaPredicted RBP12.7□□□□□ -0.38
SPG11-210ENST00000558319 NCBP2LA6PVI3 153 aaKnown RBP12.7□□□□□ -0.38
SPG11-210ENST00000558319 RNASEK-C17orf49H0YIS7 233 aa12.7□□□□□ -0.38
SPG11-210ENST00000558319 MGMTP16455 207 aa12.7□□□□□ -0.38
SPG11-210ENST00000558319 RRADP55042 308 aa12.7□□□□□ -0.38
SPG11-210ENST00000558319 MRPS21P82921 87 aaKnown RBP12.7□□□□□ -0.38
SPG11-210ENST00000558319 PAQR9Q6ZVX9 377 aa12.7□□□□□ -0.38
SPG11-210ENST00000558319 PELI3Q8N2H9 469 aa12.7□□□□□ -0.38
SPG11-210ENST00000558319 RDH5Q92781 318 aa12.7□□□□□ -0.38
SPG11-210ENST00000558319 PLA2G3Q9NZ20 509 aa12.7□□□□□ -0.38
SPG11-210ENST00000558319 ZNF835Q9Y2P0 537 aa12.7□□□□□ -0.38
SPG11-210ENST00000558319 KLKB1P03952 638 aa12.7□□□□□ -0.38
SPG11-210ENST00000558319 OPN1MWP04001 364 aa12.7□□□□□ -0.38
SPG11-210ENST00000558319 OPN1MW2P0DN77 364 aa12.7□□□□□ -0.38
SPG11-210ENST00000558319 OPN1MW3P0DN78 364 aa12.7□□□□□ -0.38
SPG11-210ENST00000558319 PMS2P11Q13670 270 aa12.7□□□□□ -0.38
SPG11-210ENST00000558319 MFSD12Q6NUT3 480 aa12.7□□□□□ -0.38
SPG11-210ENST00000558319 RABEPKQ7Z6M1 372 aa12.7□□□□□ -0.38
SPG11-210ENST00000558319 SLC35E1Q96K37 410 aa12.7□□□□□ -0.38
SPG11-210ENST00000558319 ONECUT1Q9UBC0 465 aa12.7□□□□□ -0.38
SPG11-210ENST00000558319 KLRC4-KLRK1H3BQV0 150 aa12.7□□□□□ -0.38
SPG11-210ENST00000558319 OR2J2O76002 312 aa12.7□□□□□ -0.38
SPG11-210ENST00000558319 RNF224P0DH78 156 aa12.7□□□□□ -0.38
SPG11-210ENST00000558319 ICAM2P13598 275 aa12.7□□□□□ -0.38
SPG11-210ENST00000558319 FPR3P25089 353 aa12.7□□□□□ -0.38
SPG11-210ENST00000558319 CDC34P49427 236 aaPredicted RBP12.7□□□□□ -0.38
SPG11-210ENST00000558319 RAC1P63000 192 aa12.7□□□□□ -0.38
SPG11-210ENST00000558319 SLC17A1Q14916 467 aa12.7□□□□□ -0.38
SPG11-210ENST00000558319 TIGITQ495A1 244 aa12.7□□□□□ -0.38
SPG11-210ENST00000558319 LIPNQ5VXI9 398 aa12.7□□□□□ -0.38
SPG11-210ENST00000558319 PTRH1Q86Y79 214 aaKnown RBP12.7□□□□□ -0.38
SPG11-210ENST00000558319 UCN3Q969E3 161 aa12.7□□□□□ -0.38
SPG11-210ENST00000558319 STACQ99469 402 aa12.7□□□□□ -0.38
SPG11-210ENST00000558319 ISG20L2Q9H9L3 353 aaKnown RBP12.7□□□□□ -0.38
SPG11-210ENST00000558319 RCL1Q9Y2P8 373 aaKnown RBP12.7□□□□□ -0.38
SPG11-210ENST00000558319 DNAJC25-GNG10A0A024R161 153 aa12.69□□□□□ -0.38
SPG11-210ENST00000558319 ZP3P21754 424 aa12.69□□□□□ -0.38
SPG11-210ENST00000558319 SIGIRRQ6IA17 410 aa12.69□□□□□ -0.38
SPG11-210ENST00000558319 SLC16A12Q6ZSM3 486 aa12.69□□□□□ -0.38
SPG11-210ENST00000558319 OR2M7Q8NG81 312 aa12.69□□□□□ -0.38
SPG11-210ENST00000558319 OR2AK2Q8NG84 335 aa12.69□□□□□ -0.38
SPG11-210ENST00000558319 IL22RA2Q969J5 263 aa12.69□□□□□ -0.38
SPG11-210ENST00000558319 RIMS4Q9H426 269 aaPredicted RBP12.69□□□□□ -0.38
SPG11-210ENST00000558319 PSENENQ9NZ42 101 aa12.69□□□□□ -0.38
SPG11-210ENST00000558319 FBXO4Q9UKT5 387 aa12.69□□□□□ -0.38
SPG11-210ENST00000558319 MMP24Q9Y5R2 645 aa12.69□□□□□ -0.38
SPG11-210ENST00000558319 ARPC3O15145 178 aa12.69□□□□□ -0.38
SPG11-210ENST00000558319 AMTP48728 403 aa12.69□□□□□ -0.38
SPG11-210ENST00000558319 ACOT6Q3I5F7 207 aaPredicted RBP12.69□□□□□ -0.38
SPG11-210ENST00000558319 DHRS7BQ6IAN0 325 aaPredicted RBP12.69□□□□□ -0.38
SPG11-210ENST00000558319 DHRS11Q6UWP2 260 aa12.69□□□□□ -0.38
SPG11-210ENST00000558319 ZNF429Q86V71 674 aa12.69□□□□□ -0.38
SPG11-210ENST00000558319 BAP18Q8IXM2 172 aa12.69□□□□□ -0.38
SPG11-210ENST00000558319 TMEM178AQ8NBL3 297 aa12.69□□□□□ -0.38
SPG11-210ENST00000558319 NDUFB11Q9NX14 153 aa12.69□□□□□ -0.38
SPG11-210ENST00000558319 FGF7P21781 194 aa12.69□□□□□ -0.38
SPG11-210ENST00000558319 CDAP32320 146 aa12.69□□□□□ -0.38
SPG11-210ENST00000558319 ISG20Q96AZ6 181 aaKnown RBP12.69□□□□□ -0.38
SPG11-210ENST00000558319 GNPNAT1Q96EK6 184 aaPredicted RBP12.69□□□□□ -0.38
SPG11-210ENST00000558319 SMIM12Q96EX1 92 aa12.69□□□□□ -0.38
SPG11-210ENST00000558319 H3BP45 60 aa12.69□□□□□ -0.38
SPG11-210ENST00000558319 ZNF17P17021 662 aa12.69□□□□□ -0.38
SPG11-210ENST00000558319 ZBTB37Q5TC79 503 aa12.69□□□□□ -0.38
SPG11-210ENST00000558319 SLCO4A1Q96BD0 722 aa12.69□□□□□ -0.38
SPG11-210ENST00000558319 LHX6Q9UPM6 363 aa12.69□□□□□ -0.38
SPG11-210ENST00000558319 CHD2O14647 1828 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms