RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 SLC25A51Q9H1U9 297 aa4.51□□□□□ -1.69
RTF1-204ENST00000558117 GOLPH3Q9H4A6 298 aa4.51□□□□□ -1.69
RTF1-204ENST00000558117 C5orf66Q9H5L9 145 aa4.51□□□□□ -1.69
RTF1-204ENST00000558117 NARFLQ9H6Q4 476 aa4.51□□□□□ -1.69
RTF1-204ENST00000558117 UTP6Q9NYH9 597 aaKnown RBP4.51□□□□□ -1.69
RTF1-204ENST00000558117 SOX21Q9Y651 276 aaPredicted RBP4.51□□□□□ -1.69
RTF1-204ENST00000558117 ARL5AQ9Y689 179 aa4.51□□□□□ -1.69
RTF1-204ENST00000558117 BZW2Q9Y6E2 419 aaKnown RBP4.51□□□□□ -1.69
RTF1-204ENST00000558117 VPS13DQ5THJ4 4388 aa4.5□□□□□ -1.69
RTF1-204ENST00000558117 DNAH2Q9P225 4427 aa4.5□□□□□ -1.69
RTF1-204ENST00000558117 EPM2AB3EWF7 344 aa4.5□□□□□ -1.69
RTF1-204ENST00000558117 LYNX1G3V0Z9 82 aa4.5□□□□□ -1.69
RTF1-204ENST00000558117 SDHDO14521 159 aa4.5□□□□□ -1.69
RTF1-204ENST00000558117 CHEK1O14757 476 aa4.5□□□□□ -1.69
RTF1-204ENST00000558117 ZNF264O43296 627 aa4.5□□□□□ -1.69
RTF1-204ENST00000558117 SPOPO43791 374 aa4.5□□□□□ -1.69
RTF1-204ENST00000558117 MPZL1O95297 269 aa4.5□□□□□ -1.69
RTF1-204ENST00000558117 C1orf105O95561 183 aa4.5□□□□□ -1.69
RTF1-204ENST00000558117 EPOP01588 193 aa4.5□□□□□ -1.69
RTF1-204ENST00000558117 FTH1P02794 183 aa4.5□□□□□ -1.69
RTF1-204ENST00000558117 CCDC172P0C7W6 258 aa4.5□□□□□ -1.69
RTF1-204ENST00000558117 LYNX1P0DP58 116 aa4.5□□□□□ -1.69
RTF1-204ENST00000558117 ERGP11308 486 aa4.5□□□□□ -1.69
RTF1-204ENST00000558117 IGLL1P15814 213 aa4.5□□□□□ -1.69
RTF1-204ENST00000558117 STIP1P31948 543 aaKnown RBP4.5□□□□□ -1.69
RTF1-204ENST00000558117 BDKRB1P46663 353 aa4.5□□□□□ -1.69
RTF1-204ENST00000558117 IDH3GP51553 393 aaPredicted RBP4.5□□□□□ -1.69
RTF1-204ENST00000558117 SUCLG1P53597 346 aaKnown RBP4.5□□□□□ -1.69
RTF1-204ENST00000558117 SNRPD2P62316 118 aaKnown RBP4.5□□□□□ -1.69
RTF1-204ENST00000558117 RPL23AP62750 156 aaKnown RBP4.5□□□□□ -1.69
RTF1-204ENST00000558117 SELPLGQ14242 412 aa4.5□□□□□ -1.69
RTF1-204ENST00000558117 PON3Q15166 354 aa4.5□□□□□ -1.69
RTF1-204ENST00000558117 KCTD19Q17RG1 926 aaPredicted RBP4.5□□□□□ -1.69
RTF1-204ENST00000558117 DEFB134Q4QY38 66 aa4.5□□□□□ -1.69
RTF1-204ENST00000558117 HSP90B2PQ58FF3 399 aa4.5□□□□□ -1.69
RTF1-204ENST00000558117 ARMCX4Q5H9R4 360 aa4.5□□□□□ -1.69
RTF1-204ENST00000558117 PHYHD1Q5SRE7 291 aa4.5□□□□□ -1.69
RTF1-204ENST00000558117 AADACL4Q5VUY2 407 aa4.5□□□□□ -1.69
RTF1-204ENST00000558117 ZNF343Q6P1L6 599 aa4.5□□□□□ -1.69
RTF1-204ENST00000558117 IFNEQ86WN2 208 aa4.5□□□□□ -1.69
RTF1-204ENST00000558117 C9orf40Q8IXQ3 194 aa4.5□□□□□ -1.69
RTF1-204ENST00000558117 MCOLN2Q8IZK6 566 aa4.5□□□□□ -1.69
RTF1-204ENST00000558117 TCEANCQ8N8B7 351 aa4.5□□□□□ -1.69
RTF1-204ENST00000558117 SMYD1Q8NB12 490 aa4.5□□□□□ -1.69
RTF1-204ENST00000558117 ZNF740Q8NDX6 193 aa4.5□□□□□ -1.69
RTF1-204ENST00000558117 OR4C15Q8NGM1 316 aa4.5□□□□□ -1.69
RTF1-204ENST00000558117 OR1J4Q8NGS1 313 aa4.5□□□□□ -1.69
RTF1-204ENST00000558117 PHYHIPQ92561 330 aa4.5□□□□□ -1.69
RTF1-204ENST00000558117 RAPGEF5Q92565 580 aa4.5□□□□□ -1.69
RTF1-204ENST00000558117 EMG1Q92979 244 aaKnown RBP4.5□□□□□ -1.69
RTF1-204ENST00000558117 MRPL53Q96EL3 112 aaKnown RBP4.5□□□□□ -1.69
RTF1-204ENST00000558117 NEDD4LQ96PU5 975 aa4.5□□□□□ -1.69
RTF1-204ENST00000558117 OVOL2Q9BRP0 275 aa4.5□□□□□ -1.69
RTF1-204ENST00000558117 ALKBH7Q9BT30 221 aaPredicted RBP4.5□□□□□ -1.69
RTF1-204ENST00000558117 PINK1Q9BXM7 581 aa4.5□□□□□ -1.69
RTF1-204ENST00000558117 OR8D2Q9GZM6 311 aa4.5□□□□□ -1.69
RTF1-204ENST00000558117 RNF121Q9H920 327 aa4.5□□□□□ -1.69
RTF1-204ENST00000558117 FOLH1BQ9HBA9 442 aa4.5□□□□□ -1.69
RTF1-204ENST00000558117 B3GAT2Q9NPZ5 323 aa4.5□□□□□ -1.69
RTF1-204ENST00000558117 ZMAT5Q9UDW3 170 aaKnown RBP4.5□□□□□ -1.69
RTF1-204ENST00000558117 TAC3Q9UHF0 121 aa4.5□□□□□ -1.69
RTF1-204ENST00000558117 PACSIN2Q9UNF0 486 aaPredicted RBP4.5□□□□□ -1.69
RTF1-204ENST00000558117 B9D1Q9UPM9 204 aa4.5□□□□□ -1.69
RTF1-204ENST00000558117 ERVK-19Q9WJR5 959 aa4.5□□□□□ -1.69
RTF1-204ENST00000558117 SELENOKQ9Y6D0 94 aa4.5□□□□□ -1.69
RTF1-204ENST00000558117 RNF213Q63HN8 5207 aa4.5□□□□□ -1.69
RTF1-204ENST00000558117 RNF222A6NCQ9 220 aa4.49□□□□□ -1.69
RTF1-204ENST00000558117 KIF2AO00139 706 aaPredicted RBP4.49□□□□□ -1.69
RTF1-204ENST00000558117 SYT7O43581 403 aa4.49□□□□□ -1.69
RTF1-204ENST00000558117 GOT2P00505 430 aaKnown RBP4.49□□□□□ -1.69
RTF1-204ENST00000558117 ALOX5P09917 674 aa4.49□□□□□ -1.69
RTF1-204ENST00000558117 RHOXF2BP0C7M4 288 aa4.49□□□□□ -1.69
RTF1-204ENST00000558117 RNH1P13489 461 aaKnown RBP4.49□□□□□ -1.69
RTF1-204ENST00000558117 ANPEPP15144 967 aa4.49□□□□□ -1.69
RTF1-204ENST00000558117 ACADSP16219 412 aa4.49□□□□□ -1.69
RTF1-204ENST00000558117 CCR7P32248 378 aa4.49□□□□□ -1.69
RTF1-204ENST00000558117 RPA3P35244 121 aaPredicted RBP4.49□□□□□ -1.69
RTF1-204ENST00000558117 CAPGP40121 348 aa4.49□□□□□ -1.69
RTF1-204ENST00000558117 RFX3P48380 749 aa4.49□□□□□ -1.69
RTF1-204ENST00000558117 PPT1P50897 306 aa4.49□□□□□ -1.69
RTF1-204ENST00000558117 TMEM50BP56557 158 aa4.49□□□□□ -1.69
RTF1-204ENST00000558117 FBXW4P57775 412 aa4.49□□□□□ -1.69
RTF1-204ENST00000558117 DSCR10P59022 87 aa4.49□□□□□ -1.69
RTF1-204ENST00000558117 RPS15AP62244 130 aaKnown RBP4.49□□□□□ -1.69
RTF1-204ENST00000558117 HSPA14Q0VDF9 509 aa4.49□□□□□ -1.69
RTF1-204ENST00000558117 PAFAH1B3Q15102 231 aaKnown RBP4.49□□□□□ -1.69
RTF1-204ENST00000558117 DUSP5Q16690 384 aa4.49□□□□□ -1.69
RTF1-204ENST00000558117 ACSM5Q6NUN0 579 aa4.49□□□□□ -1.69
RTF1-204ENST00000558117 DNAJC24Q6P3W2 148 aa4.49□□□□□ -1.69
RTF1-204ENST00000558117 TTC27Q6P3X3 843 aa4.49□□□□□ -1.69
RTF1-204ENST00000558117 C5orf24Q7Z6I8 188 aa4.49□□□□□ -1.69
RTF1-204ENST00000558117 LHFPL4Q7Z7J7 247 aa4.49□□□□□ -1.69
RTF1-204ENST00000558117 PRUNE1Q86TP1 453 aa4.49□□□□□ -1.69
RTF1-204ENST00000558117 ZNF677Q86XU0 584 aa4.49□□□□□ -1.69
RTF1-204ENST00000558117 OR4N5Q8IXE1 308 aa4.49□□□□□ -1.69
RTF1-204ENST00000558117 UBQLNLQ8IYU4 475 aa4.49□□□□□ -1.69
RTF1-204ENST00000558117 SLC43A2Q8N370 569 aa4.49□□□□□ -1.69
RTF1-204ENST00000558117 WFDC9Q8NEX5 89 aa4.49□□□□□ -1.69
RTF1-204ENST00000558117 OR5T2Q8NGG2 359 aa4.49□□□□□ -1.69
RTF1-204ENST00000558117 RDH11Q8TC12 318 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms