RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 KLBQ86Z14 1044 aa12.27□□□□□ -0.45
SHMT2-235ENST00000557740 ZDHHC21Q8IVQ6 265 aa12.27□□□□□ -0.45
SHMT2-235ENST00000557740 PROKR2Q8NFJ6 384 aa12.27□□□□□ -0.45
SHMT2-235ENST00000557740 OR8B3Q8NGG8 313 aa12.27□□□□□ -0.45
SHMT2-235ENST00000557740 OR52E2Q8NGJ4 325 aa12.27□□□□□ -0.45
SHMT2-235ENST00000557740 SPRYD4Q8WW59 207 aaPredicted RBP12.27□□□□□ -0.45
SHMT2-235ENST00000557740 NEIL1Q96FI4 390 aaPredicted RBP12.27□□□□□ -0.45
SHMT2-235ENST00000557740 PLEKHA8Q96JA3 519 aa12.27□□□□□ -0.45
SHMT2-235ENST00000557740 OR8B2Q96RD0 313 aa12.27□□□□□ -0.45
SHMT2-235ENST00000557740 CDRT15Q96T59 188 aa12.27□□□□□ -0.45
SHMT2-235ENST00000557740 ZMAT3Q9HA38 289 aaKnown RBP12.27□□□□□ -0.45
SHMT2-235ENST00000557740 IL1RAPQ9NPH3 570 aa12.27□□□□□ -0.45
SHMT2-235ENST00000557740 NDE1Q9NXR1 346 aa12.27□□□□□ -0.45
SHMT2-235ENST00000557740 ZNF69Q9UC07 566 aa12.27□□□□□ -0.45
SHMT2-235ENST00000557740 CYB5R1Q9UHQ9 305 aa12.27□□□□□ -0.45
SHMT2-235ENST00000557740 TAGLN3Q9UI15 199 aa12.27□□□□□ -0.45
SHMT2-235ENST00000557740 CDH10Q9Y6N8 788 aa12.27□□□□□ -0.45
SHMT2-235ENST00000557740 OR6C68A6NDL8 312 aa12.26□□□□□ -0.45
SHMT2-235ENST00000557740 DNAJC9-AS1A6NH13 148 aa12.26□□□□□ -0.45
SHMT2-235ENST00000557740 M0R135 149 aa12.26□□□□□ -0.45
SHMT2-235ENST00000557740 HLA-DPB1P04440 258 aa12.26□□□□□ -0.45
SHMT2-235ENST00000557740 ZNF823P16415 610 aa12.26□□□□□ -0.45
SHMT2-235ENST00000557740 GGT2P36268 569 aa12.26□□□□□ -0.45
SHMT2-235ENST00000557740 PITPNBP48739 271 aa12.26□□□□□ -0.45
SHMT2-235ENST00000557740 RAD23AP54725 363 aa12.26□□□□□ -0.45
SHMT2-235ENST00000557740 RSPO1Q2MKA7 263 aaPredicted RBP12.26□□□□□ -0.45
SHMT2-235ENST00000557740 KLF17Q5JT82 389 aaPredicted RBP12.26□□□□□ -0.45
SHMT2-235ENST00000557740 PGBD2Q6P3X8 592 aa12.26□□□□□ -0.45
SHMT2-235ENST00000557740 LRRN1Q6UXK5 716 aa12.26□□□□□ -0.45
SHMT2-235ENST00000557740 PGAP1Q75T13 922 aa12.26□□□□□ -0.45
SHMT2-235ENST00000557740 OR11L1Q8NGX0 322 aa12.26□□□□□ -0.45
SHMT2-235ENST00000557740 SPTSSAQ969W0 71 aa12.26□□□□□ -0.45
SHMT2-235ENST00000557740 ZNF799Q96GE5 643 aa12.26□□□□□ -0.45
SHMT2-235ENST00000557740 TMEM246Q9BRR3 403 aa12.26□□□□□ -0.45
SHMT2-235ENST00000557740 MS4A7Q9GZW8 240 aaPredicted RBP12.26□□□□□ -0.45
SHMT2-235ENST00000557740 TMEM165Q9HC07 324 aa12.26□□□□□ -0.45
SHMT2-235ENST00000557740 CD300AQ9UGN4 299 aa12.26□□□□□ -0.45
SHMT2-235ENST00000557740 NOP16Q9Y3C1 178 aaKnown RBP12.26□□□□□ -0.45
SHMT2-235ENST00000557740 IGHV2-70DA0A0C4DH43 119 aa12.25□□□□□ -0.45
SHMT2-235ENST00000557740 A0A1B0GWJ7 208 aa12.25□□□□□ -0.45
SHMT2-235ENST00000557740 ATP8B1O43520 1251 aa12.25□□□□□ -0.45
SHMT2-235ENST00000557740 KRT36O76013 467 aa12.25□□□□□ -0.45
SHMT2-235ENST00000557740 PRTN3P24158 256 aa12.25□□□□□ -0.45
SHMT2-235ENST00000557740 PYCR1P32322 319 aa12.25□□□□□ -0.45
SHMT2-235ENST00000557740 GATA4P43694 442 aa12.25□□□□□ -0.45
SHMT2-235ENST00000557740 PAX8Q06710 450 aa12.25□□□□□ -0.45
SHMT2-235ENST00000557740 BAMBIQ13145 260 aa12.25□□□□□ -0.45
SHMT2-235ENST00000557740 ZNF404Q494X3 552 aa12.25□□□□□ -0.45
SHMT2-235ENST00000557740 SPATS1Q496A3 300 aa12.25□□□□□ -0.45
SHMT2-235ENST00000557740 FAM201AQ5SY85 155 aa12.25□□□□□ -0.45
SHMT2-235ENST00000557740 DEFB107AQ8IZN7 70 aa12.25□□□□□ -0.45
SHMT2-235ENST00000557740 PARP8Q8N3A8 854 aa12.25□□□□□ -0.45
SHMT2-235ENST00000557740 CELF2-AS1Q8N7Q2 184 aa12.25□□□□□ -0.45
SHMT2-235ENST00000557740 CYB561A3Q8NBI2 242 aa12.25□□□□□ -0.45
SHMT2-235ENST00000557740 OR4C15Q8NGM1 316 aa12.25□□□□□ -0.45
SHMT2-235ENST00000557740 OR2T4Q8NH00 348 aa12.25□□□□□ -0.45
SHMT2-235ENST00000557740 SGMS2Q8NHU3 365 aa12.25□□□□□ -0.45
SHMT2-235ENST00000557740 ERGIC1Q969X5 290 aa12.25□□□□□ -0.45
SHMT2-235ENST00000557740 SLCO4A1Q96BD0 722 aa12.25□□□□□ -0.45
SHMT2-235ENST00000557740 DUX5Q96PT3 197 aa12.25□□□□□ -0.45
SHMT2-235ENST00000557740 EGLN3Q9H6Z9 239 aa12.25□□□□□ -0.45
SHMT2-235ENST00000557740 PNRC2Q9NPJ4 139 aaKnown RBP12.25□□□□□ -0.45
SHMT2-235ENST00000557740 MRPL22Q9NWU5 206 aaKnown RBP12.25□□□□□ -0.45
SHMT2-235ENST00000557740 MGAM2Q2M2H8 2515 aa12.25□□□□□ -0.45
SHMT2-235ENST00000557740 IGHV3OR16-10A0A075B7F0 116 aa12.24□□□□□ -0.45
SHMT2-235ENST00000557740 TRAV40A0A0B4J280 105 aa12.24□□□□□ -0.45
SHMT2-235ENST00000557740 TNFRSF11BO00300 401 aa12.24□□□□□ -0.45
SHMT2-235ENST00000557740 SPRY1O43609 319 aaPredicted RBP12.24□□□□□ -0.45
SHMT2-235ENST00000557740 DCTN3O75935 186 aa12.24□□□□□ -0.45
SHMT2-235ENST00000557740 FSTL3O95633 263 aa12.24□□□□□ -0.45
SHMT2-235ENST00000557740 PPIAL4GP0DN37 164 aa12.24□□□□□ -0.45
SHMT2-235ENST00000557740 CD80P33681 288 aa12.24□□□□□ -0.45
SHMT2-235ENST00000557740 CD200P41217 278 aa12.24□□□□□ -0.45
SHMT2-235ENST00000557740 MTNR1AP48039 350 aa12.24□□□□□ -0.45
SHMT2-235ENST00000557740 FOXL1Q12952 345 aa12.24□□□□□ -0.45
SHMT2-235ENST00000557740 OR8G1Q15617 311 aa12.24□□□□□ -0.45
SHMT2-235ENST00000557740 DCDC5Q6ZRR9 648 aa12.24□□□□□ -0.45
SHMT2-235ENST00000557740 BCL6BQ8N143 479 aaPredicted RBP12.24□□□□□ -0.45
SHMT2-235ENST00000557740 LINC00471Q8N535 108 aa12.24□□□□□ -0.45
SHMT2-235ENST00000557740 OR9Q2Q8NGE9 314 aa12.24□□□□□ -0.45
SHMT2-235ENST00000557740 Q8TCH9 128 aa12.24□□□□□ -0.45
SHMT2-235ENST00000557740 RAB40AQ8WXH6 277 aa12.24□□□□□ -0.45
SHMT2-235ENST00000557740 MAP6Q96JE9 813 aa12.24□□□□□ -0.45
SHMT2-235ENST00000557740 COPS4Q9BT78 406 aa12.24□□□□□ -0.45
SHMT2-235ENST00000557740 ADAT1Q9BUB4 502 aaKnown RBP12.24□□□□□ -0.45
SHMT2-235ENST00000557740 SLC22A4Q9H015 551 aa12.24□□□□□ -0.45
SHMT2-235ENST00000557740 UFSP2Q9NUQ7 469 aa12.24□□□□□ -0.45
SHMT2-235ENST00000557740 TBC1D23Q9NUY8 699 aa12.24□□□□□ -0.45
SHMT2-235ENST00000557740 ARL8BQ9NVJ2 186 aa12.24□□□□□ -0.45
SHMT2-235ENST00000557740 CLN8Q9UBY8 286 aa12.24□□□□□ -0.45
SHMT2-235ENST00000557740 ARL2BPQ9Y2Y0 163 aa12.24□□□□□ -0.45
SHMT2-235ENST00000557740 LYVE1Q9Y5Y7 322 aa12.24□□□□□ -0.45
SHMT2-235ENST00000557740 GGT3PA6NGU5 568 aa12.23□□□□□ -0.45
SHMT2-235ENST00000557740 TVP23AA6NH52 213 aa12.23□□□□□ -0.45
SHMT2-235ENST00000557740 CD300LBA8K4G0 201 aa12.23□□□□□ -0.45
SHMT2-235ENST00000557740 BHLHE40O14503 412 aa12.23□□□□□ -0.45
SHMT2-235ENST00000557740 PHYHO14832 338 aa12.23□□□□□ -0.45
SHMT2-235ENST00000557740 FAM20BO75063 409 aa12.23□□□□□ -0.45
SHMT2-235ENST00000557740 CCNB2O95067 398 aa12.23□□□□□ -0.45
SHMT2-235ENST00000557740 IGHV4-38-2P0DP08 117 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms