RNA–Protein interactions for RNA: ENST00000557005.1

SYNE2-223, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,804 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-223ENST00000557005 CREBZFQ9NS37 354 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 GNG13Q9P2W3 67 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 MRM2Q9UI43 246 aaKnown RBP4.5□□□□□ -1.69
SYNE2-223ENST00000557005 WASF3Q9UPY6 502 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 XRCC2O43543 280 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 RCC1P18754 421 aaPredicted RBP4.5□□□□□ -1.69
SYNE2-223ENST00000557005 AADACP22760 399 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 TESK1Q15569 626 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 ZNF239Q16600 458 aaKnown RBP4.5□□□□□ -1.69
SYNE2-223ENST00000557005 OR2T2Q6IF00 324 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 BAP18Q8IXM2 172 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 TMEM156Q8N614 296 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 KCNG3Q8TAE7 436 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 KIRREL1Q96J84 757 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 LCORQ96JN0 433 aaPredicted RBP4.5□□□□□ -1.69
SYNE2-223ENST00000557005 PPIL1Q9Y3C6 166 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 PAPPA2Q9BXP8 1791 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 SULT2B1O00204 365 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 OGG1O15527 345 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 DUX1O43812 170 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 ZFPL1O95159 310 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 LAP3P28838 519 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 GJA4P35212 333 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 EFNA3P52797 238 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 ZNF273Q14593 569 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 CLEC12BQ2HXU8 276 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 SOHLH1Q5JUK2 328 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 FAM209BQ5JX69 171 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 AGBL4Q5VU57 503 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 CST9LP1Q5W188 147 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 FIP1L1Q6UN15 594 aaKnown RBP4.5□□□□□ -1.69
SYNE2-223ENST00000557005 C17orf78Q8N4C9 275 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 OR6K3Q8NGY3 331 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 ASB13Q8WXK3 278 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 TCTN2Q96GX1 697 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 MED9Q9NWA0 146 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 B3GALT5Q9Y2C3 310 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 DSPPQ9NZW4 1301 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 PPP1R2P9O14990 202 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 SFT2D2O95562 160 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 GLI4P10075 376 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 NR2C1P13056 603 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 RAC2P15153 192 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 HOXC12P31275 282 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 IKZF1Q13422 519 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 EMC4Q5J8M3 183 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 RTL6Q6ICC9 239 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 ETFBKMTQ8IXQ9 262 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 FAM24BQ8N5W8 94 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 FGF13Q92913 245 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 GHITMQ9H3K2 345 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 PLK3Q9H4B4 646 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 IL21Q9HBE4 155 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 THAP10Q9P2Z0 257 aaPredicted RBP4.5□□□□□ -1.69
SYNE2-223ENST00000557005 C19orf25Q9UFG5 118 aaPredicted RBP4.5□□□□□ -1.69
SYNE2-223ENST00000557005 FAM221BA6H8Z2 402 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 ZNF724A8MTY0 619 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 ZNF587BE7ETH6 402 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 ZNF354AO60765 605 aaPredicted RBP4.49□□□□□ -1.69
SYNE2-223ENST00000557005 HPP00738 406 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 S100A8P05109 93 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 CD79AP11912 226 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 ELAVL1Q15717 326 aaKnown RBP4.49□□□□□ -1.69
SYNE2-223ENST00000557005 MPPED2Q15777 294 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 ZIC1Q15915 447 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 RNF151Q2KHN1 245 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 MISPQ8IVT2 679 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 CMTM1Q8IZ96 169 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 OR10D4PQ8NGN7 298 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 OR2A1Q8NGT9 310 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 OR14L1PQ8NHC6 308 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 ATOH1Q92858 354 aaPredicted RBP4.49□□□□□ -1.69
SYNE2-223ENST00000557005 ANKRD9Q96BM1 317 aaPredicted RBP4.49□□□□□ -1.69
SYNE2-223ENST00000557005 DNAJC5Q9H3Z4 198 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 PLEK2Q9NYT0 353 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 MTFP1Q9UDX5 166 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 SF3B6Q9Y3B4 125 aaKnown RBP4.49□□□□□ -1.69
SYNE2-223ENST00000557005 BRCA1P38398 1863 aaKnown RBP4.49□□□□□ -1.69
SYNE2-223ENST00000557005 TMEM218A2RU14 115 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 OR5K4A6NMS3 321 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 F6UZH7 168 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 G3V3Y1 287 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 ADAM10O14672 748 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 GALR3O60755 368 aaPredicted RBP4.49□□□□□ -1.69
SYNE2-223ENST00000557005 ARG1P05089 322 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 IAPPP10997 89 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 PEBP1P30086 187 aaKnown RBP4.49□□□□□ -1.69
SYNE2-223ENST00000557005 PXNP49023 591 aaPredicted RBP4.49□□□□□ -1.69
SYNE2-223ENST00000557005 HSF1Q00613 529 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 RAB32Q13637 225 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 AWAT1Q58HT5 328 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 C9orf152Q5JTZ5 239 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 AADACL3Q5VUY0 350 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 TSEN54Q7Z6J9 526 aaKnown RBP4.49□□□□□ -1.69
SYNE2-223ENST00000557005 ZNF429Q86V71 674 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 ZNF547Q8IVP9 402 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 ZNF610Q8N9Z0 462 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 ZNF485Q8NCK3 441 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 RNF128Q8TEB7 428 aa4.49□□□□□ -1.69
SYNE2-223ENST00000557005 OR1E3Q8WZA6 343 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms