RNA–Protein interactions for RNA: ENST00000556876.1

CHGA-206, Transcript of chromogranin A, humanhuman

TSL 2

Gene CHGA, Length 912 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-206ENST00000556876 FN3KRPQ9HA64 309 aa14.34□□□□□ -0.11
CHGA-206ENST00000556876 SRA1Q9HD15 236 aaKnown RBP14.34□□□□□ -0.11
CHGA-206ENST00000556876 ERVK-18Q9QC07 812 aa14.34□□□□□ -0.11
CHGA-206ENST00000556876 ABCD2Q9UBJ2 740 aa14.34□□□□□ -0.11
CHGA-206ENST00000556876 IGLV1-36A0A0B4J1U3 117 aa14.33□□□□□ -0.12
CHGA-206ENST00000556876 F5H5K5 113 aa14.33□□□□□ -0.12
CHGA-206ENST00000556876 F5H5P2 479 aa14.33□□□□□ -0.12
CHGA-206ENST00000556876 MLNRO43193 412 aa14.33□□□□□ -0.12
CHGA-206ENST00000556876 PPP1R3DO95685 299 aa14.33□□□□□ -0.12
CHGA-206ENST00000556876 LCATP04180 440 aa14.33□□□□□ -0.12
CHGA-206ENST00000556876 NUDT2P50583 147 aa14.33□□□□□ -0.12
CHGA-206ENST00000556876 TREML4Q6UXN2 200 aa14.33□□□□□ -0.12
CHGA-206ENST00000556876 OR6V1Q8N148 313 aa14.33□□□□□ -0.12
CHGA-206ENST00000556876 SLC26A10Q8NG04 563 aa14.33□□□□□ -0.12
CHGA-206ENST00000556876 FANK1Q8TC84 345 aa14.33□□□□□ -0.12
CHGA-206ENST00000556876 DACT3Q96B18 629 aaPredicted RBP14.33□□□□□ -0.12
CHGA-206ENST00000556876 C7orf34Q96L11 122 aa14.33□□□□□ -0.12
CHGA-206ENST00000556876 C1orf147Q96MC9 270 aaPredicted RBP14.33□□□□□ -0.12
CHGA-206ENST00000556876 ZNF48Q96MX3 618 aaPredicted RBP14.33□□□□□ -0.12
CHGA-206ENST00000556876 OPA3Q9H6K4 179 aa14.33□□□□□ -0.12
CHGA-206ENST00000556876 BEX1Q9HBH7 125 aa14.33□□□□□ -0.12
CHGA-206ENST00000556876 CYB5R1Q9UHQ9 305 aa14.33□□□□□ -0.12
CHGA-206ENST00000556876 TMCC3Q9ULS5 477 aa14.33□□□□□ -0.12
CHGA-206ENST00000556876 TRRAPQ9Y4A5 3859 aa14.33□□□□□ -0.12
CHGA-206ENST00000556876 MEGF8Q7Z7M0 2845 aa14.32□□□□□ -0.12
CHGA-206ENST00000556876 TRBV4-1A0A0J9YWV2 114 aa14.32□□□□□ -0.12
CHGA-206ENST00000556876 P2RY10O00398 339 aa14.32□□□□□ -0.12
CHGA-206ENST00000556876 GADD45GO95257 159 aa14.32□□□□□ -0.12
CHGA-206ENST00000556876 HLA-DQA2P01906 255 aa14.32□□□□□ -0.12
CHGA-206ENST00000556876 ACSM4P0C7M7 580 aa14.32□□□□□ -0.12
CHGA-206ENST00000556876 IGHV4-38-2P0DP08 117 aa14.32□□□□□ -0.12
CHGA-206ENST00000556876 ZNF823P16415 610 aa14.32□□□□□ -0.12
CHGA-206ENST00000556876 ERFP50548 548 aa14.32□□□□□ -0.12
CHGA-206ENST00000556876 PSME3P61289 254 aa14.32□□□□□ -0.12
CHGA-206ENST00000556876 GK2Q14410 553 aaPredicted RBP14.32□□□□□ -0.12
CHGA-206ENST00000556876 WDR25Q64LD2 544 aaPredicted RBP14.32□□□□□ -0.12
CHGA-206ENST00000556876 SLC18B1Q6NT16 456 aa14.32□□□□□ -0.12
CHGA-206ENST00000556876 RPL13AP3Q6NVV1 102 aa14.32□□□□□ -0.12
CHGA-206ENST00000556876 MRPL21Q7Z2W9 205 aaKnown RBP14.32□□□□□ -0.12
CHGA-206ENST00000556876 TSEN54Q7Z6J9 526 aaKnown RBP14.32□□□□□ -0.12
CHGA-206ENST00000556876 LINC00471Q8N535 108 aa14.32□□□□□ -0.12
CHGA-206ENST00000556876 PNLDC1Q8NA58 520 aaKnown RBP14.32□□□□□ -0.12
CHGA-206ENST00000556876 BHLHE23Q8NDY6 225 aa14.32□□□□□ -0.12
CHGA-206ENST00000556876 OR10S1Q8NGN2 331 aa14.32□□□□□ -0.12
CHGA-206ENST00000556876 OR4F5Q8NH21 305 aa14.32□□□□□ -0.12
CHGA-206ENST00000556876 TMIGD2Q96BF3 282 aa14.32□□□□□ -0.12
CHGA-206ENST00000556876 PYURFQ96I23 114 aa14.32□□□□□ -0.12
CHGA-206ENST00000556876 DUX5Q96PT3 197 aa14.32□□□□□ -0.12
CHGA-206ENST00000556876 IFT27Q9BW83 186 aa14.32□□□□□ -0.12
CHGA-206ENST00000556876 RNF7Q9UBF6 113 aa14.32□□□□□ -0.12
CHGA-206ENST00000556876 TANC2Q9HCD6 1990 aa14.31□□□□□ -0.12
CHGA-206ENST00000556876 TRAV38-1A0A0B4J264 116 aa14.31□□□□□ -0.12
CHGA-206ENST00000556876 TRAV40A0A0B4J280 105 aa14.31□□□□□ -0.12
CHGA-206ENST00000556876 SRRM5B3KS81 715 aa14.31□□□□□ -0.12
CHGA-206ENST00000556876 H0YL77 283 aa14.31□□□□□ -0.12
CHGA-206ENST00000556876 SASH3O75995 380 aa14.31□□□□□ -0.12
CHGA-206ENST00000556876 PRDX6P30041 224 aa14.31□□□□□ -0.12
CHGA-206ENST00000556876 PSMB10P40306 273 aa14.31□□□□□ -0.12
CHGA-206ENST00000556876 SF3A3Q12874 501 aaKnown RBP eCLIP14.31□□□□□ -0.12
CHGA-206ENST00000556876 TRAP1Q12931 704 aaKnown RBP14.31□□□□□ -0.12
CHGA-206ENST00000556876 OR8G1Q15617 311 aa14.31□□□□□ -0.12
CHGA-206ENST00000556876 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.31□□□□□ -0.12
CHGA-206ENST00000556876 FITM2Q8N6M3 262 aa14.31□□□□□ -0.12
CHGA-206ENST00000556876 OR52J3Q8NH60 311 aa14.31□□□□□ -0.12
CHGA-206ENST00000556876 SLCO4A1Q96BD0 722 aa14.31□□□□□ -0.12
CHGA-206ENST00000556876 TSSK2Q96PF2 358 aa14.31□□□□□ -0.12
CHGA-206ENST00000556876 NMNAT3Q96T66 252 aa14.31□□□□□ -0.12
CHGA-206ENST00000556876 OR52D1Q9H346 318 aa14.31□□□□□ -0.12
CHGA-206ENST00000556876 MRPL15Q9P015 296 aaKnown RBP14.31□□□□□ -0.12
CHGA-206ENST00000556876 POMT1Q9Y6A1 747 aa14.31□□□□□ -0.12
CHGA-206ENST00000556876 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.3□□□□□ -0.12
CHGA-206ENST00000556876 LGALS8O00214 317 aa14.3□□□□□ -0.12
CHGA-206ENST00000556876 DCTN6O00399 190 aa14.3□□□□□ -0.12
CHGA-206ENST00000556876 OR10H3O60404 316 aa14.3□□□□□ -0.12
CHGA-206ENST00000556876 PTBP3O95758 552 aaKnown RBP14.3□□□□□ -0.12
CHGA-206ENST00000556876 GPANK1O95872 356 aa14.3□□□□□ -0.12
CHGA-206ENST00000556876 ECDO95905 644 aaPredicted RBP14.3□□□□□ -0.12
CHGA-206ENST00000556876 NCK1P16333 377 aa14.3□□□□□ -0.12
CHGA-206ENST00000556876 HIST1H1CP16403 213 aaKnown RBP14.3□□□□□ -0.12
CHGA-206ENST00000556876 GGT2P36268 569 aa14.3□□□□□ -0.12
CHGA-206ENST00000556876 DDOSTP39656 456 aa14.3□□□□□ -0.12
CHGA-206ENST00000556876 FXYD6P3P58550 94 aa14.3□□□□□ -0.12
CHGA-206ENST00000556876 MAB21L1Q13394 359 aa14.3□□□□□ -0.12
CHGA-206ENST00000556876 PDCD1Q15116 288 aa14.3□□□□□ -0.12
CHGA-206ENST00000556876 SEC23BQ15437 767 aa14.3□□□□□ -0.12
CHGA-206ENST00000556876 RSPO1Q2MKA7 263 aaPredicted RBP14.3□□□□□ -0.12
CHGA-206ENST00000556876 CORO6Q6QEF8 472 aa14.3□□□□□ -0.12
CHGA-206ENST00000556876 SPATC1Q76KD6 591 aa14.3□□□□□ -0.12
CHGA-206ENST00000556876 DMRTB1Q96MA1 342 aa14.3□□□□□ -0.12
CHGA-206ENST00000556876 FUZQ9BT04 418 aa14.3□□□□□ -0.12
CHGA-206ENST00000556876 NSRP1Q9H0G5 558 aaKnown RBP14.3□□□□□ -0.12
CHGA-206ENST00000556876 SP140LQ9H930 580 aa14.3□□□□□ -0.12
CHGA-206ENST00000556876 RPRD1BQ9NQG5 326 aaKnown RBP14.3□□□□□ -0.12
CHGA-206ENST00000556876 C14orf119Q9NWQ9 140 aa14.3□□□□□ -0.12
CHGA-206ENST00000556876 ADA2Q9NZK5 511 aa14.3□□□□□ -0.12
CHGA-206ENST00000556876 MAGEL2Q9UJ55 1249 aa14.3□□□□□ -0.12
CHGA-206ENST00000556876 PKD1L1Q8TDX9 2849 aa14.29□□□□□ -0.12
CHGA-206ENST00000556876 ARHGAP32A7KAX9 2087 aa14.29□□□□□ -0.12
CHGA-206ENST00000556876 CD300LBA8K4G0 201 aa14.29□□□□□ -0.12
CHGA-206ENST00000556876 M0R135 149 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms