RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 ZSCAN5BA6NJL1 495 aa12.01□□□□□ -0.49
SLIRP-207ENST00000556831 VWC2LB2RUY7 222 aa12.01□□□□□ -0.49
SLIRP-207ENST00000556831 CLDN25C9JDP6 229 aa12.01□□□□□ -0.49
SLIRP-207ENST00000556831 LYNX1G3V0Z9 82 aa12.01□□□□□ -0.49
SLIRP-207ENST00000556831 CD5LO43866 347 aa12.01□□□□□ -0.49
SLIRP-207ENST00000556831 NCR1O76036 304 aa12.01□□□□□ -0.49
SLIRP-207ENST00000556831 IGHV1-46P01743 117 aa12.01□□□□□ -0.49
SLIRP-207ENST00000556831 RPSAP08865 295 aaKnown RBP12.01□□□□□ -0.49
SLIRP-207ENST00000556831 ACSM4P0C7M7 580 aa12.01□□□□□ -0.49
SLIRP-207ENST00000556831 LYNX1P0DP58 116 aa12.01□□□□□ -0.49
SLIRP-207ENST00000556831 TNFRSF1AP19438 455 aa12.01□□□□□ -0.49
SLIRP-207ENST00000556831 KITLGP21583 273 aa12.01□□□□□ -0.49
SLIRP-207ENST00000556831 DAPP51397 102 aa12.01□□□□□ -0.49
SLIRP-207ENST00000556831 MMP15P51511 669 aa12.01□□□□□ -0.49
SLIRP-207ENST00000556831 RAD23AP54725 363 aa12.01□□□□□ -0.49
SLIRP-207ENST00000556831 TMEM33P57088 247 aa12.01□□□□□ -0.49
SLIRP-207ENST00000556831 ACTR3P61158 418 aa12.01□□□□□ -0.49
SLIRP-207ENST00000556831 TNFAIP6P98066 277 aaPredicted RBP12.01□□□□□ -0.49
SLIRP-207ENST00000556831 SLC3A1Q07837 685 aa12.01□□□□□ -0.49
SLIRP-207ENST00000556831 TMEM255AQ5JRV8 349 aa12.01□□□□□ -0.49
SLIRP-207ENST00000556831 TEX30Q5JUR7 227 aa12.01□□□□□ -0.49
SLIRP-207ENST00000556831 SLC35D3Q5M8T2 416 aa12.01□□□□□ -0.49
SLIRP-207ENST00000556831 TMEM236Q5W0B7 351 aa12.01□□□□□ -0.49
SLIRP-207ENST00000556831 DRAM2Q6UX65 266 aa12.01□□□□□ -0.49
SLIRP-207ENST00000556831 SPATC1Q76KD6 591 aa12.01□□□□□ -0.49
SLIRP-207ENST00000556831 DPY19L4Q7Z388 723 aa12.01□□□□□ -0.49
SLIRP-207ENST00000556831 PEG10Q86TG7 708 aaKnown RBP12.01□□□□□ -0.49
SLIRP-207ENST00000556831 PRIMA1Q86XR5 153 aa12.01□□□□□ -0.49
SLIRP-207ENST00000556831 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.01□□□□□ -0.49
SLIRP-207ENST00000556831 CPOQ8IVL8 374 aa12.01□□□□□ -0.49
SLIRP-207ENST00000556831 OR5AS1Q8N127 324 aa12.01□□□□□ -0.49
SLIRP-207ENST00000556831 ZNF283Q8N7M2 679 aa12.01□□□□□ -0.49
SLIRP-207ENST00000556831 OR2Z1Q8NG97 314 aa12.01□□□□□ -0.49
SLIRP-207ENST00000556831 ZMYND19Q96E35 227 aaPredicted RBP12.01□□□□□ -0.49
SLIRP-207ENST00000556831 OSBPL10Q9BXB5 764 aa12.01□□□□□ -0.49
SLIRP-207ENST00000556831 C1QTNF5Q9BXJ0 243 aa12.01□□□□□ -0.49
SLIRP-207ENST00000556831 TOR3AQ9H497 397 aa12.01□□□□□ -0.49
SLIRP-207ENST00000556831 MSL2Q9HCI7 577 aa12.01□□□□□ -0.49
SLIRP-207ENST00000556831 ZNF275Q9NSD4 429 aaPredicted RBP12.01□□□□□ -0.49
SLIRP-207ENST00000556831 DDX28Q9NUL7 540 aaKnown RBP12.01□□□□□ -0.49
SLIRP-207ENST00000556831 H2AFY2Q9P0M6 372 aaPredicted RBP12.01□□□□□ -0.49
SLIRP-207ENST00000556831 IGHV4-61A0A0C4DH41 118 aa12□□□□□ -0.49
SLIRP-207ENST00000556831 SAC3D1A6NKF1 404 aa12□□□□□ -0.49
SLIRP-207ENST00000556831 CRYBB2P43320 205 aa12□□□□□ -0.49
SLIRP-207ENST00000556831 BLMHQ13867 455 aa12□□□□□ -0.49
SLIRP-207ENST00000556831 HLXQ14774 488 aaPredicted RBP12□□□□□ -0.49
SLIRP-207ENST00000556831 PTGES3Q15185 160 aaKnown RBP12□□□□□ -0.49
SLIRP-207ENST00000556831 FBXW12Q6X9E4 464 aa12□□□□□ -0.49
SLIRP-207ENST00000556831 PGAP1Q75T13 922 aa12□□□□□ -0.49
SLIRP-207ENST00000556831 ZNF454Q8N9F8 522 aa12□□□□□ -0.49
SLIRP-207ENST00000556831 SPRYD4Q8WW59 207 aaPredicted RBP12□□□□□ -0.49
SLIRP-207ENST00000556831 ZNRF4Q8WWF5 429 aa12□□□□□ -0.49
SLIRP-207ENST00000556831 GTF3AQ92664 365 aaKnown RBP12□□□□□ -0.49
SLIRP-207ENST00000556831 HAVCR1Q96D42 359 aa12□□□□□ -0.49
SLIRP-207ENST00000556831 KCNJ15Q99712 375 aa12□□□□□ -0.49
SLIRP-207ENST00000556831 RBM4BQ9BQ04 359 aaKnown RBP12□□□□□ -0.49
SLIRP-207ENST00000556831 POFUT1Q9H488 388 aa12□□□□□ -0.49
SLIRP-207ENST00000556831 PNRC2Q9NPJ4 139 aaKnown RBP12□□□□□ -0.49
SLIRP-207ENST00000556831 OAZ3Q9UMX2 235 aa12□□□□□ -0.49
SLIRP-207ENST00000556831 NOP16Q9Y3C1 178 aaKnown RBP12□□□□□ -0.49
SLIRP-207ENST00000556831 N6AMT1Q9Y5N5 214 aa12□□□□□ -0.49
SLIRP-207ENST00000556831 SONP18583 2426 aaKnown RBP12□□□□□ -0.49
SLIRP-207ENST00000556831 SVEP1Q4LDE5 3571 aa12□□□□□ -0.49
SLIRP-207ENST00000556831 A8MV72 311 aaPredicted RBP11.99□□□□□ -0.49
SLIRP-207ENST00000556831 INAFM1C9JVW0 142 aa11.99□□□□□ -0.49
SLIRP-207ENST00000556831 TBX1O43435 398 aa11.99□□□□□ -0.49
SLIRP-207ENST00000556831 ANXA2P07355 339 aaKnown RBP11.99□□□□□ -0.49
SLIRP-207ENST00000556831 LYNP07948 512 aa11.99□□□□□ -0.49
SLIRP-207ENST00000556831 ADH4P08319 380 aa11.99□□□□□ -0.49
SLIRP-207ENST00000556831 H2BFMP0C1H6 154 aa11.99□□□□□ -0.49
SLIRP-207ENST00000556831 ZNF16P17020 682 aaPredicted RBP11.99□□□□□ -0.49
SLIRP-207ENST00000556831 COL8A2P25067 703 aa11.99□□□□□ -0.49
SLIRP-207ENST00000556831 PRKXP51817 358 aa11.99□□□□□ -0.49
SLIRP-207ENST00000556831 HNRNPA0Q13151 305 aaKnown RBP11.99□□□□□ -0.49
SLIRP-207ENST00000556831 RIN1Q13671 783 aa11.99□□□□□ -0.49
SLIRP-207ENST00000556831 APOFQ13790 326 aa11.99□□□□□ -0.49
SLIRP-207ENST00000556831 PCK2Q16822 640 aa11.99□□□□□ -0.49
SLIRP-207ENST00000556831 C6orf52Q5T4I8 152 aa11.99□□□□□ -0.49
SLIRP-207ENST00000556831 LINC01590Q5TEZ4 76 aa11.99□□□□□ -0.49
SLIRP-207ENST00000556831 KDM4DQ6B0I6 523 aa11.99□□□□□ -0.49
SLIRP-207ENST00000556831 OR2T2Q6IF00 324 aa11.99□□□□□ -0.49
SLIRP-207ENST00000556831 BHLHE23Q8NDY6 225 aa11.99□□□□□ -0.49
SLIRP-207ENST00000556831 OR13G1Q8NGZ3 307 aa11.99□□□□□ -0.49
SLIRP-207ENST00000556831 THEM6Q8WUY1 208 aa11.99□□□□□ -0.49
SLIRP-207ENST00000556831 CCL17Q92583 94 aa11.99□□□□□ -0.49
SLIRP-207ENST00000556831 RAB1CQ92928 201 aa11.99□□□□□ -0.49
SLIRP-207ENST00000556831 NR1H4Q96RI1 486 aaPredicted RBP11.99□□□□□ -0.49
SLIRP-207ENST00000556831 RIBC2Q9H4K1 309 aa11.99□□□□□ -0.49
SLIRP-207ENST00000556831 OPA3Q9H6K4 179 aa11.99□□□□□ -0.49
SLIRP-207ENST00000556831 NARFLQ9H6Q4 476 aa11.99□□□□□ -0.49
SLIRP-207ENST00000556831 LAMP5Q9UJQ1 280 aa11.99□□□□□ -0.49
SLIRP-207ENST00000556831 KCNS2Q9ULS6 477 aa11.99□□□□□ -0.49
SLIRP-207ENST00000556831 CUBNO60494 3623 aa11.99□□□□□ -0.49
SLIRP-207ENST00000556831 YLPM1P49750 1951 aaKnown RBP11.98□□□□□ -0.49
SLIRP-207ENST00000556831 LOC100289279A0A1B0GTE1 492 aa11.98□□□□□ -0.49
SLIRP-207ENST00000556831 ISPDA4D126 451 aa11.98□□□□□ -0.49
SLIRP-207ENST00000556831 GGT3PA6NGU5 568 aa11.98□□□□□ -0.49
SLIRP-207ENST00000556831 XRCC2O43543 280 aa11.98□□□□□ -0.49
SLIRP-207ENST00000556831 SELENOFO60613 162 aa11.98□□□□□ -0.49
SLIRP-207ENST00000556831 MITFO75030 526 aaPredicted RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms