RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 PGBD2Q6P3X8 592 aa18.93■□□□□ 0.62
ACTN1-220ENST00000556433 ZNF620Q6ZNG0 422 aa18.93■□□□□ 0.62
ACTN1-220ENST00000556433 DOK3Q7L591 496 aa18.93■□□□□ 0.62
ACTN1-220ENST00000556433 KLBQ86Z14 1044 aa18.93■□□□□ 0.62
ACTN1-220ENST00000556433 ZDHHC21Q8IVQ6 265 aa18.93■□□□□ 0.62
ACTN1-220ENST00000556433 C1orf87Q8N0U7 546 aa18.93■□□□□ 0.62
ACTN1-220ENST00000556433 SLCO4A1Q96BD0 722 aa18.93■□□□□ 0.62
ACTN1-220ENST00000556433 ZMYND19Q96E35 227 aaPredicted RBP18.93■□□□□ 0.62
ACTN1-220ENST00000556433 TMEM246Q9BRR3 403 aa18.93■□□□□ 0.62
ACTN1-220ENST00000556433 PNRC2Q9NPJ4 139 aaKnown RBP18.93■□□□□ 0.62
ACTN1-220ENST00000556433 ATP8B1O43520 1251 aa18.92■□□□□ 0.62
ACTN1-220ENST00000556433 ZNF823P16415 610 aa18.92■□□□□ 0.62
ACTN1-220ENST00000556433 TPTEP56180 551 aa18.92■□□□□ 0.62
ACTN1-220ENST00000556433 GNB2P62879 340 aa18.92■□□□□ 0.62
ACTN1-220ENST00000556433 TUSC1Q2TAM9 212 aa18.92■□□□□ 0.62
ACTN1-220ENST00000556433 AWAT1Q58HT5 328 aa18.92■□□□□ 0.62
ACTN1-220ENST00000556433 CLEC12AQ5QGZ9 265 aa18.92■□□□□ 0.62
ACTN1-220ENST00000556433 FAM201AQ5SY85 155 aa18.92■□□□□ 0.62
ACTN1-220ENST00000556433 NEIL1Q96FI4 390 aaPredicted RBP18.92■□□□□ 0.62
ACTN1-220ENST00000556433 PLEKHA8Q96JA3 519 aa18.92■□□□□ 0.62
ACTN1-220ENST00000556433 EGLN3Q9H6Z9 239 aa18.92■□□□□ 0.62
ACTN1-220ENST00000556433 ARL8BQ9NVJ2 186 aa18.92■□□□□ 0.62
ACTN1-220ENST00000556433 MRPL22Q9NWU5 206 aaKnown RBP18.92■□□□□ 0.62
ACTN1-220ENST00000556433 TAGLN3Q9UI15 199 aa18.92■□□□□ 0.62
ACTN1-220ENST00000556433 A0A1B0GWJ7 208 aa18.91■□□□□ 0.62
ACTN1-220ENST00000556433 IRF2P14316 349 aa18.91■□□□□ 0.62
ACTN1-220ENST00000556433 PYCR1P32322 319 aa18.91■□□□□ 0.62
ACTN1-220ENST00000556433 PAX2Q02962 417 aa18.91■□□□□ 0.62
ACTN1-220ENST00000556433 MAB21L1Q13394 359 aa18.91■□□□□ 0.62
ACTN1-220ENST00000556433 BTNL3Q6UXE8 466 aa18.91■□□□□ 0.62
ACTN1-220ENST00000556433 LRRN1Q6UXK5 716 aa18.91■□□□□ 0.62
ACTN1-220ENST00000556433 PGAP1Q75T13 922 aa18.91■□□□□ 0.62
ACTN1-220ENST00000556433 SPRYD4Q8WW59 207 aaPredicted RBP18.91■□□□□ 0.62
ACTN1-220ENST00000556433 MAP6Q96JE9 813 aa18.91■□□□□ 0.62
ACTN1-220ENST00000556433 DUX5Q96PT3 197 aa18.91■□□□□ 0.62
ACTN1-220ENST00000556433 MS4A7Q9GZW8 240 aaPredicted RBP18.91■□□□□ 0.62
ACTN1-220ENST00000556433 KCNG2Q9UJ96 466 aa18.91■□□□□ 0.62
ACTN1-220ENST00000556433 KRT36O76013 467 aa18.9■□□□□ 0.62
ACTN1-220ENST00000556433 FSTL3O95633 263 aa18.9■□□□□ 0.62
ACTN1-220ENST00000556433 PRTN3P24158 256 aa18.9■□□□□ 0.62
ACTN1-220ENST00000556433 GATA4P43694 442 aa18.9■□□□□ 0.62
ACTN1-220ENST00000556433 BAMBIQ13145 260 aa18.9■□□□□ 0.62
ACTN1-220ENST00000556433 ZNF404Q494X3 552 aa18.9■□□□□ 0.62
ACTN1-220ENST00000556433 DEFB107AQ8IZN7 70 aa18.9■□□□□ 0.62
ACTN1-220ENST00000556433 CYB561A3Q8NBI2 242 aa18.9■□□□□ 0.62
ACTN1-220ENST00000556433 OR8B3Q8NGG8 313 aa18.9■□□□□ 0.62
ACTN1-220ENST00000556433 OR52L1Q8NGH7 329 aa18.9■□□□□ 0.62
ACTN1-220ENST00000556433 OR11L1Q8NGX0 322 aa18.9■□□□□ 0.62
ACTN1-220ENST00000556433 SGMS2Q8NHU3 365 aa18.9■□□□□ 0.62
ACTN1-220ENST00000556433 RAB40AQ8WXH6 277 aa18.9■□□□□ 0.62
ACTN1-220ENST00000556433 SPTSSAQ969W0 71 aa18.9■□□□□ 0.62
ACTN1-220ENST00000556433 OR8B2Q96RD0 313 aa18.9■□□□□ 0.62
ACTN1-220ENST00000556433 DDOQ99489 341 aa18.9■□□□□ 0.62
ACTN1-220ENST00000556433 CDH10Q9Y6N8 788 aa18.9■□□□□ 0.62
ACTN1-220ENST00000556433 IGHV3OR16-10A0A075B7F0 116 aa18.89■□□□□ 0.61
ACTN1-220ENST00000556433 IGHV2-70DA0A0C4DH43 119 aa18.89■□□□□ 0.61
ACTN1-220ENST00000556433 TVP23AA6NH52 213 aa18.89■□□□□ 0.61
ACTN1-220ENST00000556433 M0R135 149 aa18.89■□□□□ 0.61
ACTN1-220ENST00000556433 HKR1P10072 659 aa18.89■□□□□ 0.61
ACTN1-220ENST00000556433 EGR1P18146 543 aa18.89■□□□□ 0.61
ACTN1-220ENST00000556433 RPS27P42677 84 aaKnown RBP18.89■□□□□ 0.61
ACTN1-220ENST00000556433 HMGA2P52926 109 aa18.89■□□□□ 0.61
ACTN1-220ENST00000556433 C16orf89Q6UX73 402 aa18.89■□□□□ 0.61
ACTN1-220ENST00000556433 NLRC3Q7RTR2 1065 aa18.89■□□□□ 0.61
ACTN1-220ENST00000556433 MRPL21Q7Z2W9 205 aaKnown RBP18.89■□□□□ 0.61
ACTN1-220ENST00000556433 CELF2-AS1Q8N7Q2 184 aa18.89■□□□□ 0.61
ACTN1-220ENST00000556433 PROKR2Q8NFJ6 384 aa18.89■□□□□ 0.61
ACTN1-220ENST00000556433 OR9Q2Q8NGE9 314 aa18.89■□□□□ 0.61
ACTN1-220ENST00000556433 ERGIC1Q969X5 290 aa18.89■□□□□ 0.61
ACTN1-220ENST00000556433 ZNF799Q96GE5 643 aa18.89■□□□□ 0.61
ACTN1-220ENST00000556433 ZNF48Q96MX3 618 aaPredicted RBP18.89■□□□□ 0.61
ACTN1-220ENST00000556433 DNAJC9-AS1A6NH13 148 aa18.88■□□□□ 0.61
ACTN1-220ENST00000556433 TNFRSF11BO00300 401 aa18.88■□□□□ 0.61
ACTN1-220ENST00000556433 BHLHE40O14503 412 aa18.88■□□□□ 0.61
ACTN1-220ENST00000556433 SPRY1O43609 319 aaPredicted RBP18.88■□□□□ 0.61
ACTN1-220ENST00000556433 IGHV4-38-2P0DP08 117 aa18.88■□□□□ 0.61
ACTN1-220ENST00000556433 CD200P41217 278 aa18.88■□□□□ 0.61
ACTN1-220ENST00000556433 PITPNBP48739 271 aa18.88■□□□□ 0.61
ACTN1-220ENST00000556433 MXRA7P84157 204 aa18.88■□□□□ 0.61
ACTN1-220ENST00000556433 FOXL1Q12952 345 aa18.88■□□□□ 0.61
ACTN1-220ENST00000556433 OR8G1Q15617 311 aa18.88■□□□□ 0.61
ACTN1-220ENST00000556433 SPATS1Q496A3 300 aa18.88■□□□□ 0.61
ACTN1-220ENST00000556433 PRAMEF6Q5VXH4 476 aa18.88■□□□□ 0.61
ACTN1-220ENST00000556433 RPL13AP3Q6NVV1 102 aa18.88■□□□□ 0.61
ACTN1-220ENST00000556433 LINC00471Q8N535 108 aa18.88■□□□□ 0.61
ACTN1-220ENST00000556433 OR10S1Q8NGN2 331 aa18.88■□□□□ 0.61
ACTN1-220ENST00000556433 OR2T4Q8NH00 348 aa18.88■□□□□ 0.61
ACTN1-220ENST00000556433 Q8TCH9 128 aa18.88■□□□□ 0.61
ACTN1-220ENST00000556433 ZNRF4Q8WWF5 429 aa18.88■□□□□ 0.61
ACTN1-220ENST00000556433 UFSP2Q9NUQ7 469 aa18.88■□□□□ 0.61
ACTN1-220ENST00000556433 NDE1Q9NXR1 346 aa18.88■□□□□ 0.61
ACTN1-220ENST00000556433 ARL2BPQ9Y2Y0 163 aa18.88■□□□□ 0.61
ACTN1-220ENST00000556433 LYVE1Q9Y5Y7 322 aa18.88■□□□□ 0.61
ACTN1-220ENST00000556433 KIR2DS1A0A191URI9 304 aa18.87■□□□□ 0.61
ACTN1-220ENST00000556433 CD300LBA8K4G0 201 aa18.87■□□□□ 0.61
ACTN1-220ENST00000556433 FAM20BO75063 409 aa18.87■□□□□ 0.61
ACTN1-220ENST00000556433 GASTP01350 101 aa18.87■□□□□ 0.61
ACTN1-220ENST00000556433 PPIAL4GP0DN37 164 aa18.87■□□□□ 0.61
ACTN1-220ENST00000556433 CA6P23280 308 aa18.87■□□□□ 0.61
ACTN1-220ENST00000556433 RAD23AP54725 363 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms