RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 TSTD3H0UI37 97 aa13.54□□□□□ -0.24
ARHGEF40-207ENST00000556399 FAM53BQ14153 422 aa13.54□□□□□ -0.24
ARHGEF40-207ENST00000556399 PHYHIPLQ96FC7 376 aa13.54□□□□□ -0.24
ARHGEF40-207ENST00000556399 FN3KRPQ9HA64 309 aa13.54□□□□□ -0.24
ARHGEF40-207ENST00000556399 FGF21Q9NSA1 209 aa13.54□□□□□ -0.24
ARHGEF40-207ENST00000556399 GFOD1Q9NXC2 390 aa13.54□□□□□ -0.24
ARHGEF40-207ENST00000556399 PCDHGA5Q9Y5G8 931 aa13.54□□□□□ -0.24
ARHGEF40-207ENST00000556399 CD300LBA8K4G0 201 aa13.54□□□□□ -0.24
ARHGEF40-207ENST00000556399 F2RL1P55085 397 aa13.54□□□□□ -0.24
ARHGEF40-207ENST00000556399 ZNF266Q14584 549 aa13.54□□□□□ -0.24
ARHGEF40-207ENST00000556399 SUMF1Q8NBK3 374 aa13.54□□□□□ -0.24
ARHGEF40-207ENST00000556399 SECTM1Q8WVN6 248 aa13.54□□□□□ -0.24
ARHGEF40-207ENST00000556399 EMG1Q92979 244 aaKnown RBP13.54□□□□□ -0.24
ARHGEF40-207ENST00000556399 SLC22A11Q9NSA0 550 aa13.54□□□□□ -0.24
ARHGEF40-207ENST00000556399 PADI1Q9ULC6 663 aa13.54□□□□□ -0.24
ARHGEF40-207ENST00000556399 TRPM6Q9BX84 2022 aa13.54□□□□□ -0.24
ARHGEF40-207ENST00000556399 IGKV1-8A0A0C4DH67 115 aa13.54□□□□□ -0.24
ARHGEF40-207ENST00000556399 FRG2CA6NGY1 282 aa13.54□□□□□ -0.24
ARHGEF40-207ENST00000556399 UMAD1C9J7I0 102 aa13.54□□□□□ -0.24
ARHGEF40-207ENST00000556399 PTP4A3O75365 173 aa13.54□□□□□ -0.24
ARHGEF40-207ENST00000556399 ZNF133P52736 654 aaPredicted RBP13.54□□□□□ -0.24
ARHGEF40-207ENST00000556399 KIAA0141Q14154 515 aaPredicted RBP13.54□□□□□ -0.24
ARHGEF40-207ENST00000556399 LGI3Q8N145 548 aa13.54□□□□□ -0.24
ARHGEF40-207ENST00000556399 OR13C8Q8NGS7 320 aa13.54□□□□□ -0.24
ARHGEF40-207ENST00000556399 CPNE4Q96A23 557 aaPredicted RBP13.54□□□□□ -0.24
ARHGEF40-207ENST00000556399 MRGPRX1Q96LB2 322 aa13.54□□□□□ -0.24
ARHGEF40-207ENST00000556399 PGLYRP3Q96LB9 341 aa13.54□□□□□ -0.24
ARHGEF40-207ENST00000556399 IFT22Q9H7X7 185 aa13.54□□□□□ -0.24
ARHGEF40-207ENST00000556399 MOB1AQ9H8S9 216 aa13.54□□□□□ -0.24
ARHGEF40-207ENST00000556399 FLVCR1Q9Y5Y0 555 aa13.54□□□□□ -0.24
ARHGEF40-207ENST00000556399 TRAV8-7A0A075B6U6 113 aa13.54□□□□□ -0.24
ARHGEF40-207ENST00000556399 C9orf170A2RU37 121 aa13.54□□□□□ -0.24
ARHGEF40-207ENST00000556399 MPC2O95563 127 aa13.54□□□□□ -0.24
ARHGEF40-207ENST00000556399 TAGLN2P37802 199 aaKnown RBP13.54□□□□□ -0.24
ARHGEF40-207ENST00000556399 OR2B8PP59922 312 aa13.54□□□□□ -0.24
ARHGEF40-207ENST00000556399 SLC35A1P78382 337 aa13.54□□□□□ -0.24
ARHGEF40-207ENST00000556399 MRPL21Q7Z2W9 205 aaKnown RBP13.54□□□□□ -0.24
ARHGEF40-207ENST00000556399 OR5L1Q8NGL2 311 aa13.54□□□□□ -0.24
ARHGEF40-207ENST00000556399 ELSPBP1Q96BH3 223 aa13.54□□□□□ -0.24
ARHGEF40-207ENST00000556399 LMAN1LQ9HAT1 526 aa13.54□□□□□ -0.24
ARHGEF40-207ENST00000556399 SMCO3A2RU48 225 aa13.53□□□□□ -0.24
ARHGEF40-207ENST00000556399 H0YIG0 161 aa13.53□□□□□ -0.24
ARHGEF40-207ENST00000556399 EIF2S3P41091 472 aaKnown RBP13.53□□□□□ -0.24
ARHGEF40-207ENST00000556399 IL34Q6ZMJ4 242 aa13.53□□□□□ -0.24
ARHGEF40-207ENST00000556399 NELFAQ9H3P2 528 aa13.53□□□□□ -0.24
ARHGEF40-207ENST00000556399 LOC102725191A0A1B0GVB3 256 aa13.53□□□□□ -0.24
ARHGEF40-207ENST00000556399 GSTP1P09211 210 aaKnown RBP13.53□□□□□ -0.24
ARHGEF40-207ENST00000556399 DPP4P27487 766 aa13.53□□□□□ -0.24
ARHGEF40-207ENST00000556399 LAP3P28838 519 aa13.53□□□□□ -0.24
ARHGEF40-207ENST00000556399 AKR1C3P42330 323 aa13.53□□□□□ -0.24
ARHGEF40-207ENST00000556399 HTR5AP47898 357 aa13.53□□□□□ -0.24
ARHGEF40-207ENST00000556399 PSG6Q00889 435 aa13.53□□□□□ -0.24
ARHGEF40-207ENST00000556399 FBXO46Q6PJ61 603 aaPredicted RBP13.53□□□□□ -0.24
ARHGEF40-207ENST00000556399 CPEB2Q7Z5Q1 589 aaKnown RBP13.53□□□□□ -0.24
ARHGEF40-207ENST00000556399 TMEM217Q8N7C4 229 aa13.53□□□□□ -0.24
ARHGEF40-207ENST00000556399 GPR119Q8TDV5 335 aa13.53□□□□□ -0.24
ARHGEF40-207ENST00000556399 GPR31O00270 319 aa13.53□□□□□ -0.24
ARHGEF40-207ENST00000556399 LRP3O75074 770 aa13.53□□□□□ -0.24
ARHGEF40-207ENST00000556399 S100A8P05109 93 aa13.53□□□□□ -0.24
ARHGEF40-207ENST00000556399 NMBP08949 121 aa13.53□□□□□ -0.24
ARHGEF40-207ENST00000556399 LAMTOR1Q6IAA8 161 aa13.53□□□□□ -0.24
ARHGEF40-207ENST00000556399 CBLN3Q6UW01 205 aa13.53□□□□□ -0.24
ARHGEF40-207ENST00000556399 TMEM182Q6ZP80 229 aaPredicted RBP13.53□□□□□ -0.24
ARHGEF40-207ENST00000556399 OR10AC1Q8NH08 325 aa13.53□□□□□ -0.24
ARHGEF40-207ENST00000556399 NIPSNAP3BQ9BS92 247 aa13.53□□□□□ -0.24
ARHGEF40-207ENST00000556399 URGCP-MRPS24S4R325 110 aa13.53□□□□□ -0.24
ARHGEF40-207ENST00000556399 SCN3AQ9NY46 2000 aa13.53□□□□□ -0.24
ARHGEF40-207ENST00000556399 ST8SIA3O43173 380 aa13.53□□□□□ -0.24
ARHGEF40-207ENST00000556399 SIGLEC6O43699 453 aa13.53□□□□□ -0.24
ARHGEF40-207ENST00000556399 TPPPO94811 219 aa13.53□□□□□ -0.24
ARHGEF40-207ENST00000556399 GJC3Q8NFK1 279 aa13.53□□□□□ -0.24
ARHGEF40-207ENST00000556399 IL1F10Q8WWZ1 152 aa13.53□□□□□ -0.24
ARHGEF40-207ENST00000556399 TMPRSS13Q9BYE2 586 aa13.53□□□□□ -0.24
ARHGEF40-207ENST00000556399 WWTR1Q9GZV5 400 aa13.53□□□□□ -0.24
ARHGEF40-207ENST00000556399 ZNF275Q9NSD4 429 aaPredicted RBP13.53□□□□□ -0.24
ARHGEF40-207ENST00000556399 GPR160Q9UJ42 338 aa13.53□□□□□ -0.24
ARHGEF40-207ENST00000556399 GDF2Q9UK05 429 aaPredicted RBP13.53□□□□□ -0.24
ARHGEF40-207ENST00000556399 RNASEK-C17orf49H0YIS7 233 aa13.52□□□□□ -0.24
ARHGEF40-207ENST00000556399 GPR137BO60478 399 aa13.52□□□□□ -0.24
ARHGEF40-207ENST00000556399 SFTA3P0C7M3 94 aa13.52□□□□□ -0.24
ARHGEF40-207ENST00000556399 FASLGP48023 281 aa13.52□□□□□ -0.24
ARHGEF40-207ENST00000556399 DMRTC1Q5HYR2 192 aa13.52□□□□□ -0.24
ARHGEF40-207ENST00000556399 LDAHQ9H6V9 325 aa13.52□□□□□ -0.24
ARHGEF40-207ENST00000556399 MMP26Q9NRE1 261 aa13.52□□□□□ -0.24
ARHGEF40-207ENST00000556399 VSTM5A8MXK1 200 aa13.52□□□□□ -0.24
ARHGEF40-207ENST00000556399 NANOS3P60323 173 aaKnown RBP13.52□□□□□ -0.24
ARHGEF40-207ENST00000556399 ZNF117Q03924 483 aa13.52□□□□□ -0.24
ARHGEF40-207ENST00000556399 TLE4Q04727 773 aa13.52□□□□□ -0.24
ARHGEF40-207ENST00000556399 LFNGQ8NES3 379 aa13.52□□□□□ -0.24
ARHGEF40-207ENST00000556399 CTSFQ9UBX1 484 aa13.52□□□□□ -0.24
ARHGEF40-207ENST00000556399 PSME4Q14997 1843 aa13.52□□□□□ -0.24
ARHGEF40-207ENST00000556399 WDR81Q562E7 1941 aa13.52□□□□□ -0.25
ARHGEF40-207ENST00000556399 OR4C45A6NMZ5 311 aa13.52□□□□□ -0.25
ARHGEF40-207ENST00000556399 ERGP11308 486 aa13.52□□□□□ -0.25
ARHGEF40-207ENST00000556399 POU3F2P20265 443 aaPredicted RBP13.52□□□□□ -0.25
ARHGEF40-207ENST00000556399 GPR85P60893 370 aa13.52□□□□□ -0.25
ARHGEF40-207ENST00000556399 SRPXP78539 464 aa13.52□□□□□ -0.25
ARHGEF40-207ENST00000556399 PJVKQ0ZLH3 352 aa13.52□□□□□ -0.25
ARHGEF40-207ENST00000556399 EIF2S3LQ2VIR3 472 aaKnown RBP13.52□□□□□ -0.25
ARHGEF40-207ENST00000556399 HIST2H3PS2Q5TEC6 136 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms