RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 DAPP51397 102 aa9.8□□□□□ -0.84
SLIRP-205ENST00000556310 TPTEP56180 551 aa9.8□□□□□ -0.84
SLIRP-205ENST00000556310 TMEM33P57088 247 aa9.8□□□□□ -0.84
SLIRP-205ENST00000556310 CDK5R2Q13319 367 aa9.8□□□□□ -0.84
SLIRP-205ENST00000556310 TRIP10Q15642 601 aa9.8□□□□□ -0.84
SLIRP-205ENST00000556310 KRTAP21-3Q3LHN1 58 aa9.8□□□□□ -0.84
SLIRP-205ENST00000556310 USP51Q70EK9 711 aa9.8□□□□□ -0.84
SLIRP-205ENST00000556310 DCXRQ7Z4W1 244 aa9.8□□□□□ -0.84
SLIRP-205ENST00000556310 ST7LQ8TDW4 575 aa9.8□□□□□ -0.84
SLIRP-205ENST00000556310 PTP4A1Q93096 173 aa9.8□□□□□ -0.84
SLIRP-205ENST00000556310 OTULINQ96BN8 352 aa9.8□□□□□ -0.84
SLIRP-205ENST00000556310 ZNF799Q96GE5 643 aa9.8□□□□□ -0.84
SLIRP-205ENST00000556310 INTS14Q96SY0 518 aa9.8□□□□□ -0.84
SLIRP-205ENST00000556310 TEX12Q9BXU0 123 aa9.8□□□□□ -0.84
SLIRP-205ENST00000556310 GABARAPL1Q9H0R8 117 aa9.8□□□□□ -0.84
SLIRP-205ENST00000556310 MARCH7Q9H992 704 aa9.8□□□□□ -0.84
SLIRP-205ENST00000556310 MSL2Q9HCI7 577 aa9.8□□□□□ -0.84
SLIRP-205ENST00000556310 LRP5LA4QPB2 252 aa9.79□□□□□ -0.84
SLIRP-205ENST00000556310 CLDN25C9JDP6 229 aa9.79□□□□□ -0.84
SLIRP-205ENST00000556310 ZNF878C9JN71 531 aa9.79□□□□□ -0.84
SLIRP-205ENST00000556310 G3V2T6 193 aa9.79□□□□□ -0.84
SLIRP-205ENST00000556310 ZNF593O00488 134 aaPredicted RBP9.79□□□□□ -0.84
SLIRP-205ENST00000556310 PRODHO43272 600 aa9.79□□□□□ -0.84
SLIRP-205ENST00000556310 PPIHO43447 177 aaKnown RBP9.79□□□□□ -0.84
SLIRP-205ENST00000556310 CDC14BO60729 498 aa9.79□□□□□ -0.84
SLIRP-205ENST00000556310 CRLF1O75462 422 aa9.79□□□□□ -0.84
SLIRP-205ENST00000556310 LCATP04180 440 aa9.79□□□□□ -0.84
SLIRP-205ENST00000556310 TNFSF4P23510 183 aa9.79□□□□□ -0.84
SLIRP-205ENST00000556310 GSTT1P30711 240 aa9.79□□□□□ -0.84
SLIRP-205ENST00000556310 CRISP1P54107 249 aa9.79□□□□□ -0.84
SLIRP-205ENST00000556310 ESRRGP62508 458 aa9.79□□□□□ -0.84
SLIRP-205ENST00000556310 HLXQ14774 488 aaPredicted RBP9.79□□□□□ -0.84
SLIRP-205ENST00000556310 HFEQ30201 348 aa9.79□□□□□ -0.84
SLIRP-205ENST00000556310 PLBD1Q6P4A8 553 aa9.79□□□□□ -0.84
SLIRP-205ENST00000556310 Q6ZR03 302 aa9.79□□□□□ -0.84
SLIRP-205ENST00000556310 ZDHHC13Q8IUH4 622 aa9.79□□□□□ -0.84
SLIRP-205ENST00000556310 OR6N2Q8NGY6 317 aa9.79□□□□□ -0.84
SLIRP-205ENST00000556310 MSI2Q96DH6 328 aaKnown RBP9.79□□□□□ -0.84
SLIRP-205ENST00000556310 SLAMF6Q96DU3 332 aa9.79□□□□□ -0.84
SLIRP-205ENST00000556310 PLEKHA8Q96JA3 519 aa9.79□□□□□ -0.84
SLIRP-205ENST00000556310 COPS4Q9BT78 406 aa9.79□□□□□ -0.84
SLIRP-205ENST00000556310 PRRG3Q9BZD7 231 aa9.79□□□□□ -0.84
SLIRP-205ENST00000556310 KRT84Q9NSB2 600 aa9.79□□□□□ -0.84
SLIRP-205ENST00000556310 TMEM160Q9NX00 188 aa9.79□□□□□ -0.84
SLIRP-205ENST00000556310 DYSFO75923 2080 aa9.78□□□□□ -0.84
SLIRP-205ENST00000556310 IQCF6A8MYZ5 107 aa9.78□□□□□ -0.84
SLIRP-205ENST00000556310 EBAG9O00559 213 aa9.78□□□□□ -0.84
SLIRP-205ENST00000556310 VSIG8P0DPA2 414 aa9.78□□□□□ -0.84
SLIRP-205ENST00000556310 SELEP16581 610 aa9.78□□□□□ -0.84
SLIRP-205ENST00000556310 IL2RGP31785 369 aa9.78□□□□□ -0.84
SLIRP-205ENST00000556310 SLC6A9P48067 706 aa9.78□□□□□ -0.84
SLIRP-205ENST00000556310 ACTR3P61158 418 aa9.78□□□□□ -0.84
SLIRP-205ENST00000556310 TNFAIP6P98066 277 aaPredicted RBP9.78□□□□□ -0.84
SLIRP-205ENST00000556310 MALLQ13021 153 aa9.78□□□□□ -0.84
SLIRP-205ENST00000556310 SLC35D3Q5M8T2 416 aa9.78□□□□□ -0.84
SLIRP-205ENST00000556310 TMEM236Q5W0B7 351 aa9.78□□□□□ -0.84
SLIRP-205ENST00000556310 KDM4DQ6B0I6 523 aa9.78□□□□□ -0.84
SLIRP-205ENST00000556310 OR2T2Q6IF00 324 aa9.78□□□□□ -0.84
SLIRP-205ENST00000556310 FAM166AQ6J272 317 aa9.78□□□□□ -0.84
SLIRP-205ENST00000556310 DRAM2Q6UX65 266 aa9.78□□□□□ -0.84
SLIRP-205ENST00000556310 SHFQ7M4L6 423 aa9.78□□□□□ -0.84
SLIRP-205ENST00000556310 DPY19L4Q7Z388 723 aa9.78□□□□□ -0.84
SLIRP-205ENST00000556310 AMIGO2Q86SJ2 522 aa9.78□□□□□ -0.84
SLIRP-205ENST00000556310 ERI1Q8IV48 349 aaKnown RBP9.78□□□□□ -0.84
SLIRP-205ENST00000556310 CPOQ8IVL8 374 aa9.78□□□□□ -0.84
SLIRP-205ENST00000556310 TIGD4Q8IY51 512 aa9.78□□□□□ -0.84
SLIRP-205ENST00000556310 OR5AS1Q8N127 324 aa9.78□□□□□ -0.84
SLIRP-205ENST00000556310 OR8G5Q8NG78 346 aa9.78□□□□□ -0.84
SLIRP-205ENST00000556310 OR2Z1Q8NG97 314 aa9.78□□□□□ -0.84
SLIRP-205ENST00000556310 CLDND2Q8NHS1 167 aa9.78□□□□□ -0.84
SLIRP-205ENST00000556310 LRTOMTQ8WZ04 291 aa9.78□□□□□ -0.84
SLIRP-205ENST00000556310 ZMYND19Q96E35 227 aaPredicted RBP9.78□□□□□ -0.84
SLIRP-205ENST00000556310 C1orf159Q96HA4 380 aa9.78□□□□□ -0.84
SLIRP-205ENST00000556310 SOX7Q9BT81 388 aa9.78□□□□□ -0.84
SLIRP-205ENST00000556310 OR51V1Q9H2C8 321 aa9.78□□□□□ -0.84
SLIRP-205ENST00000556310 ENOPH1Q9UHY7 261 aa9.78□□□□□ -0.84
SLIRP-205ENST00000556310 KCNS2Q9ULS6 477 aa9.78□□□□□ -0.84
SLIRP-205ENST00000556310 CACNG2Q9Y698 323 aa9.78□□□□□ -0.84
SLIRP-205ENST00000556310 LOC100289279A0A1B0GTE1 492 aa9.77□□□□□ -0.85
SLIRP-205ENST00000556310 TNFRSF1AP19438 455 aa9.77□□□□□ -0.85
SLIRP-205ENST00000556310 SLC2A5P22732 501 aa9.77□□□□□ -0.85
SLIRP-205ENST00000556310 SLC15A1P46059 708 aa9.77□□□□□ -0.85
SLIRP-205ENST00000556310 CDH15P55291 814 aa9.77□□□□□ -0.85
SLIRP-205ENST00000556310 GRB2P62993 217 aaKnown RBP9.77□□□□□ -0.85
SLIRP-205ENST00000556310 SLC3A1Q07837 685 aa9.77□□□□□ -0.85
SLIRP-205ENST00000556310 EIF2B1Q14232 305 aaKnown RBP9.77□□□□□ -0.85
SLIRP-205ENST00000556310 GK2Q14410 553 aaPredicted RBP9.77□□□□□ -0.85
SLIRP-205ENST00000556310 PTGES3Q15185 160 aaKnown RBP9.77□□□□□ -0.85
SLIRP-205ENST00000556310 TAF13Q15543 124 aa9.77□□□□□ -0.85
SLIRP-205ENST00000556310 SNAPC1Q16533 368 aa9.77□□□□□ -0.85
SLIRP-205ENST00000556310 KLHL12Q53G59 568 aa9.77□□□□□ -0.85
SLIRP-205ENST00000556310 CXXC5Q7LFL8 322 aaKnown RBP9.77□□□□□ -0.85
SLIRP-205ENST00000556310 MRPL21Q7Z2W9 205 aaKnown RBP9.77□□□□□ -0.85
SLIRP-205ENST00000556310 NAA40Q86UY6 237 aa9.77□□□□□ -0.85
SLIRP-205ENST00000556310 BHLHE23Q8NDY6 225 aa9.77□□□□□ -0.85
SLIRP-205ENST00000556310 OR13G1Q8NGZ3 307 aa9.77□□□□□ -0.85
SLIRP-205ENST00000556310 RNF133Q8WVZ7 376 aa9.77□□□□□ -0.85
SLIRP-205ENST00000556310 TIMD4Q96H15 378 aa9.77□□□□□ -0.85
SLIRP-205ENST00000556310 CENPNQ96H22 339 aaPredicted RBP9.77□□□□□ -0.85
SLIRP-205ENST00000556310 ZNF582Q96NG8 517 aaPredicted RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms