RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 CEACAM16Q2WEN9 425 aa12.92□□□□□ -0.34
VPS33B-205ENST00000556096 CHMP1BQ7LBR1 199 aa12.92□□□□□ -0.34
VPS33B-205ENST00000556096 NRARPQ7Z6K4 114 aa12.92□□□□□ -0.34
VPS33B-205ENST00000556096 FNDC9Q8TBE3 224 aa12.92□□□□□ -0.34
VPS33B-205ENST00000556096 OR51E1Q8TCB6 317 aa12.92□□□□□ -0.34
VPS33B-205ENST00000556096 EXTL1Q92935 676 aa12.92□□□□□ -0.34
VPS33B-205ENST00000556096 FGGYQ96C11 551 aa12.92□□□□□ -0.34
VPS33B-205ENST00000556096 S100A16Q96FQ6 103 aaKnown RBP12.92□□□□□ -0.34
VPS33B-205ENST00000556096 ALKBH3Q96Q83 286 aaPredicted RBP12.92□□□□□ -0.34
VPS33B-205ENST00000556096 THAP7Q9BT49 309 aaPredicted RBP12.92□□□□□ -0.34
VPS33B-205ENST00000556096 PRRG4Q9BZD6 226 aa12.92□□□□□ -0.34
VPS33B-205ENST00000556096 C11orf54Q9H0W9 315 aaPredicted RBP12.92□□□□□ -0.34
VPS33B-205ENST00000556096 EXO5Q9H790 373 aa12.92□□□□□ -0.34
VPS33B-205ENST00000556096 SLC5A6Q9Y289 635 aa12.92□□□□□ -0.34
VPS33B-205ENST00000556096 PKD1L2Q7Z442 2459 aa12.92□□□□□ -0.34
VPS33B-205ENST00000556096 EPG5Q9HCE0 2579 aa12.92□□□□□ -0.34
VPS33B-205ENST00000556096 RPL36A-HNRNPH2H7BZ11 118 aa12.91□□□□□ -0.34
VPS33B-205ENST00000556096 SULT1B1O43704 296 aa12.91□□□□□ -0.34
VPS33B-205ENST00000556096 GSTZ1O43708 216 aaPredicted RBP12.91□□□□□ -0.34
VPS33B-205ENST00000556096 IGHG3P01860 377 aa12.91□□□□□ -0.34
VPS33B-205ENST00000556096 YES1P07947 543 aa12.91□□□□□ -0.34
VPS33B-205ENST00000556096 DDOSTP39656 456 aa12.91□□□□□ -0.34
VPS33B-205ENST00000556096 MNDAP41218 407 aa12.91□□□□□ -0.34
VPS33B-205ENST00000556096 UCNP55089 124 aa12.91□□□□□ -0.34
VPS33B-205ENST00000556096 SCRN3Q0VDG4 424 aa12.91□□□□□ -0.34
VPS33B-205ENST00000556096 ECH1Q13011 328 aa12.91□□□□□ -0.34
VPS33B-205ENST00000556096 RAB35Q15286 201 aa12.91□□□□□ -0.34
VPS33B-205ENST00000556096 RAB11BQ15907 218 aa12.91□□□□□ -0.34
VPS33B-205ENST00000556096 RSPO1Q2MKA7 263 aaPredicted RBP12.91□□□□□ -0.34
VPS33B-205ENST00000556096 TSPO2Q5TGU0 170 aa12.91□□□□□ -0.34
VPS33B-205ENST00000556096 TUSC5Q8IXB3 177 aa12.91□□□□□ -0.34
VPS33B-205ENST00000556096 SLC22A24Q8N4F4 322 aa12.91□□□□□ -0.34
VPS33B-205ENST00000556096 NKAIN3Q8N8D7 197 aa12.91□□□□□ -0.34
VPS33B-205ENST00000556096 DTX3Q8N9I9 347 aa12.91□□□□□ -0.34
VPS33B-205ENST00000556096 SYNPRQ8TBG9 265 aa12.91□□□□□ -0.34
VPS33B-205ENST00000556096 TRIM63Q969Q1 353 aa12.91□□□□□ -0.34
VPS33B-205ENST00000556096 RFT1Q96AA3 541 aa12.91□□□□□ -0.34
VPS33B-205ENST00000556096 FOXRED1Q96CU9 486 aaPredicted RBP12.91□□□□□ -0.34
VPS33B-205ENST00000556096 HAVCR1Q96D42 359 aa12.91□□□□□ -0.34
VPS33B-205ENST00000556096 HDHD2Q9H0R4 259 aa12.91□□□□□ -0.34
VPS33B-205ENST00000556096 PLEK2Q9NYT0 353 aa12.91□□□□□ -0.34
VPS33B-205ENST00000556096 CACNA1BQ00975 2339 aa12.91□□□□□ -0.34
VPS33B-205ENST00000556096 LINC00854A0A1B0GVQ3 168 aa12.91□□□□□ -0.34
VPS33B-205ENST00000556096 LOC390937A0A1W2PQ73 354 aa12.91□□□□□ -0.34
VPS33B-205ENST00000556096 SGCEO43556 437 aa12.91□□□□□ -0.34
VPS33B-205ENST00000556096 LMX1BO60663 402 aa12.91□□□□□ -0.34
VPS33B-205ENST00000556096 IGLV3-1P01715 115 aa12.91□□□□□ -0.34
VPS33B-205ENST00000556096 ITGA5P08648 1049 aa12.91□□□□□ -0.34
VPS33B-205ENST00000556096 INPP1P49441 399 aa12.91□□□□□ -0.34
VPS33B-205ENST00000556096 PCBD1P61457 104 aa12.91□□□□□ -0.34
VPS33B-205ENST00000556096 GALK2Q01415 458 aa12.91□□□□□ -0.34
VPS33B-205ENST00000556096 C1orf100Q5SVJ3 147 aa12.91□□□□□ -0.34
VPS33B-205ENST00000556096 MZT2BQ6NZ67 158 aa12.91□□□□□ -0.34
VPS33B-205ENST00000556096 ZNF529Q6P280 563 aa12.91□□□□□ -0.34
VPS33B-205ENST00000556096 FAM57BQ71RH2 274 aa12.91□□□□□ -0.34
VPS33B-205ENST00000556096 DOK3Q7L591 496 aa12.91□□□□□ -0.34
VPS33B-205ENST00000556096 LYPD6Q86Y78 171 aa12.91□□□□□ -0.34
VPS33B-205ENST00000556096 OR5D14Q8NGL3 314 aa12.91□□□□□ -0.34
VPS33B-205ENST00000556096 OR1J2Q8NGS2 313 aa12.91□□□□□ -0.34
VPS33B-205ENST00000556096 SPTSSAQ969W0 71 aa12.91□□□□□ -0.34
VPS33B-205ENST00000556096 SLC25A28Q96A46 364 aa12.91□□□□□ -0.34
VPS33B-205ENST00000556096 ZC3HAV1LQ96H79 300 aaKnown RBP12.91□□□□□ -0.34
VPS33B-205ENST00000556096 GP6Q9HCN6 339 aa12.91□□□□□ -0.34
VPS33B-205ENST00000556096 SLC17A5Q9NRA2 495 aa12.91□□□□□ -0.34
VPS33B-205ENST00000556096 ZNF319Q9P2F9 582 aa12.91□□□□□ -0.34
VPS33B-205ENST00000556096 SPRR3Q9UBC9 169 aa12.91□□□□□ -0.34
VPS33B-205ENST00000556096 NCOA6Q14686 2063 aaPredicted RBP12.9□□□□□ -0.34
VPS33B-205ENST00000556096 ITPR1Q14643 2758 aa12.9□□□□□ -0.34
VPS33B-205ENST00000556096 A0A0U1RQV5 110 aa12.9□□□□□ -0.34
VPS33B-205ENST00000556096 TFECO14948 347 aaPredicted RBP12.9□□□□□ -0.34
VPS33B-205ENST00000556096 SYNGR3O43761 229 aa12.9□□□□□ -0.34
VPS33B-205ENST00000556096 SSX4O60224 188 aa12.9□□□□□ -0.34
VPS33B-205ENST00000556096 KRT33AO76009 404 aa12.9□□□□□ -0.34
VPS33B-205ENST00000556096 SLC2A1P11166 492 aa12.9□□□□□ -0.34
VPS33B-205ENST00000556096 MAP2K3P46734 347 aa12.9□□□□□ -0.34
VPS33B-205ENST00000556096 ZNF813Q6ZN06 617 aa12.9□□□□□ -0.34
VPS33B-205ENST00000556096 Q6ZSR3 168 aa12.9□□□□□ -0.34
VPS33B-205ENST00000556096 ABHD12BQ7Z5M8 362 aaPredicted RBP12.9□□□□□ -0.34
VPS33B-205ENST00000556096 CADM3Q8N126 398 aa12.9□□□□□ -0.34
VPS33B-205ENST00000556096 PLPP7Q8NBV4 271 aa12.9□□□□□ -0.34
VPS33B-205ENST00000556096 CCDC54Q8NEL0 328 aa12.9□□□□□ -0.34
VPS33B-205ENST00000556096 OR6M1Q8NGM8 313 aa12.9□□□□□ -0.34
VPS33B-205ENST00000556096 C15orf40Q8WUR7 153 aa12.9□□□□□ -0.34
VPS33B-205ENST00000556096 FAM3DQ96BQ1 224 aa12.9□□□□□ -0.34
VPS33B-205ENST00000556096 ADAT3Q96EY9 351 aaPredicted RBP12.9□□□□□ -0.34
VPS33B-205ENST00000556096 PGAM5Q96HS1 289 aa12.9□□□□□ -0.34
VPS33B-205ENST00000556096 PRORYQ9H606 182 aa12.9□□□□□ -0.34
VPS33B-205ENST00000556096 GPR84Q9NQS5 396 aa12.9□□□□□ -0.34
VPS33B-205ENST00000556096 SLC7A10Q9NS82 523 aa12.9□□□□□ -0.34
VPS33B-205ENST00000556096 RHBDL2Q9NX52 303 aa12.9□□□□□ -0.34
VPS33B-205ENST00000556096 ZNF175Q9Y473 711 aa12.9□□□□□ -0.34
VPS33B-205ENST00000556096 TIMM10BQ9Y5J6 103 aa12.9□□□□□ -0.34
VPS33B-205ENST00000556096 LOC100289279A0A1B0GTE1 492 aa12.89□□□□□ -0.35
VPS33B-205ENST00000556096 F5H5K5 113 aa12.89□□□□□ -0.35
VPS33B-205ENST00000556096 M0R135 149 aa12.89□□□□□ -0.35
VPS33B-205ENST00000556096 B4GALT1P15291 398 aa12.89□□□□□ -0.35
VPS33B-205ENST00000556096 ZNF24P17028 368 aa12.89□□□□□ -0.35
VPS33B-205ENST00000556096 CRYGSP22914 178 aa12.89□□□□□ -0.35
VPS33B-205ENST00000556096 HTR2CP28335 458 aa12.89□□□□□ -0.35
VPS33B-205ENST00000556096 BDKRB2P30411 391 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms