RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 ZNF462Q96JM2 2506 aa9.73□□□□□ -0.85
SHMT2-220ENST00000555634 CYSRT1A8MQ03 144 aa9.73□□□□□ -0.85
SHMT2-220ENST00000555634 VSTM5A8MXK1 200 aa9.73□□□□□ -0.85
SHMT2-220ENST00000555634 INMTO95050 263 aa9.73□□□□□ -0.85
SHMT2-220ENST00000555634 ATE1O95260 518 aa9.73□□□□□ -0.85
SHMT2-220ENST00000555634 IGLV1-44P01699 117 aa9.73□□□□□ -0.85
SHMT2-220ENST00000555634 HLA-DPB1P04440 258 aa9.73□□□□□ -0.85
SHMT2-220ENST00000555634 ACSM4P0C7M7 580 aa9.73□□□□□ -0.85
SHMT2-220ENST00000555634 CECR9P0C854 216 aa9.73□□□□□ -0.85
SHMT2-220ENST00000555634 OCM2P0CE71 109 aa9.73□□□□□ -0.85
SHMT2-220ENST00000555634 OCMP0CE72 109 aaPredicted RBP9.73□□□□□ -0.85
SHMT2-220ENST00000555634 PCSK6P29122 969 aa9.73□□□□□ -0.85
SHMT2-220ENST00000555634 OTX1P32242 354 aaPredicted RBP9.73□□□□□ -0.85
SHMT2-220ENST00000555634 PSMB10P40306 273 aa9.73□□□□□ -0.85
SHMT2-220ENST00000555634 YIF1BQ5BJH7 314 aa9.73□□□□□ -0.85
SHMT2-220ENST00000555634 ZNF684Q5T5D7 378 aa9.73□□□□□ -0.85
SHMT2-220ENST00000555634 XAF1Q6GPH4 301 aa9.73□□□□□ -0.85
SHMT2-220ENST00000555634 FDX2Q6P4F2 183 aa9.73□□□□□ -0.85
SHMT2-220ENST00000555634 PAMR1Q6UXH9 720 aa9.73□□□□□ -0.85
SHMT2-220ENST00000555634 CPEB3Q8NE35 698 aaKnown RBP9.73□□□□□ -0.85
SHMT2-220ENST00000555634 OR10S1Q8NGN2 331 aa9.73□□□□□ -0.85
SHMT2-220ENST00000555634 ABHD4Q8TB40 342 aa9.73□□□□□ -0.85
SHMT2-220ENST00000555634 GPR148Q8TDV2 347 aa9.73□□□□□ -0.85
SHMT2-220ENST00000555634 ITFG2Q969R8 447 aa9.73□□□□□ -0.85
SHMT2-220ENST00000555634 RADILQ96JH8 1075 aa9.73□□□□□ -0.85
SHMT2-220ENST00000555634 C4orf45Q96LM5 186 aa9.73□□□□□ -0.85
SHMT2-220ENST00000555634 DACH2Q96NX9 599 aa9.73□□□□□ -0.85
SHMT2-220ENST00000555634 OPALINQ96PE5 141 aa9.73□□□□□ -0.85
SHMT2-220ENST00000555634 TMED9Q9BVK6 235 aa9.73□□□□□ -0.85
SHMT2-220ENST00000555634 C1QTNF6Q9BXI9 259 aa9.73□□□□□ -0.85
SHMT2-220ENST00000555634 PBOV1Q9GZY1 135 aa9.73□□□□□ -0.85
SHMT2-220ENST00000555634 NEK6Q9HC98 313 aa9.73□□□□□ -0.85
SHMT2-220ENST00000555634 FAM206AQ9NX38 181 aa9.73□□□□□ -0.85
SHMT2-220ENST00000555634 CKLFQ9UBR5 152 aa9.73□□□□□ -0.85
SHMT2-220ENST00000555634 HHLA2Q9UM44 414 aa9.73□□□□□ -0.85
SHMT2-220ENST00000555634 KLF2Q9Y5W3 355 aaPredicted RBP9.73□□□□□ -0.85
SHMT2-220ENST00000555634 HELZ2Q9BYK8 2649 aaKnown RBP9.73□□□□□ -0.85
SHMT2-220ENST00000555634 IGHV1-18A0A0C4DH31 117 aa9.72□□□□□ -0.85
SHMT2-220ENST00000555634 A0A0U1RQV5 110 aa9.72□□□□□ -0.85
SHMT2-220ENST00000555634 LOC107986453A0A1B0GWG9 222 aa9.72□□□□□ -0.85
SHMT2-220ENST00000555634 ZNF503-AS2A6NEH8 195 aa9.72□□□□□ -0.85
SHMT2-220ENST00000555634 ZNF879B4DU55 563 aa9.72□□□□□ -0.85
SHMT2-220ENST00000555634 H3BSA7 217 aa9.72□□□□□ -0.85
SHMT2-220ENST00000555634 MAGEB4O15481 346 aaPredicted RBP9.72□□□□□ -0.85
SHMT2-220ENST00000555634 SYT7O43581 403 aa9.72□□□□□ -0.85
SHMT2-220ENST00000555634 PLPP2O43688 288 aa9.72□□□□□ -0.85
SHMT2-220ENST00000555634 ARL6IP5O75915 188 aa9.72□□□□□ -0.85
SHMT2-220ENST00000555634 RGS9O75916 674 aaPredicted RBP9.72□□□□□ -0.85
SHMT2-220ENST00000555634 GOSR1O95249 250 aa9.72□□□□□ -0.85
SHMT2-220ENST00000555634 CD1AP06126 327 aa9.72□□□□□ -0.85
SHMT2-220ENST00000555634 CD3EP07766 207 aa9.72□□□□□ -0.85
SHMT2-220ENST00000555634 EPXP11678 715 aa9.72□□□□□ -0.85
SHMT2-220ENST00000555634 PLA2G2AP14555 144 aa9.72□□□□□ -0.85
SHMT2-220ENST00000555634 CD36P16671 472 aa9.72□□□□□ -0.85
SHMT2-220ENST00000555634 ZNF20P17024 532 aa9.72□□□□□ -0.85
SHMT2-220ENST00000555634 ACHEP22303 614 aa9.72□□□□□ -0.85
SHMT2-220ENST00000555634 KIR2DL3P43628 341 aa9.72□□□□□ -0.85
SHMT2-220ENST00000555634 SELENOVP59797 346 aa9.72□□□□□ -0.85
SHMT2-220ENST00000555634 MFGE8Q08431 387 aaPredicted RBP9.72□□□□□ -0.85
SHMT2-220ENST00000555634 BLMHQ13867 455 aa9.72□□□□□ -0.85
SHMT2-220ENST00000555634 BEX5Q5H9J7 111 aa9.72□□□□□ -0.85
SHMT2-220ENST00000555634 WDR38Q5JTN6 314 aa9.72□□□□□ -0.85
SHMT2-220ENST00000555634 SEZ6L2Q6UXD5 910 aa9.72□□□□□ -0.85
SHMT2-220ENST00000555634 DOK3Q7L591 496 aa9.72□□□□□ -0.85
SHMT2-220ENST00000555634 CATSPERDQ86XM0 798 aa9.72□□□□□ -0.85
SHMT2-220ENST00000555634 PIAS4Q8N2W9 510 aaPredicted RBP9.72□□□□□ -0.85
SHMT2-220ENST00000555634 ZFP41Q8N8Y5 198 aa9.72□□□□□ -0.85
SHMT2-220ENST00000555634 OR13C3Q8NGS6 347 aa9.72□□□□□ -0.85
SHMT2-220ENST00000555634 FGFBP3Q8TAT2 258 aa9.72□□□□□ -0.85
SHMT2-220ENST00000555634 MS4A3Q96HJ5 214 aa9.72□□□□□ -0.85
SHMT2-220ENST00000555634 POM121L2Q96KW2 1035 aa9.72□□□□□ -0.85
SHMT2-220ENST00000555634 ZNF649Q9BS31 505 aa9.72□□□□□ -0.85
SHMT2-220ENST00000555634 SLITRK2Q9H156 845 aa9.72□□□□□ -0.85
SHMT2-220ENST00000555634 NOX3Q9HBY0 568 aa9.72□□□□□ -0.85
SHMT2-220ENST00000555634 BATF3Q9NR55 127 aa9.72□□□□□ -0.85
SHMT2-220ENST00000555634 TBCCD1Q9NVR7 557 aa9.72□□□□□ -0.85
SHMT2-220ENST00000555634 NDUFA13Q9P0J0 144 aa9.72□□□□□ -0.85
SHMT2-220ENST00000555634 STUB1Q9UNE7 303 aa9.72□□□□□ -0.85
SHMT2-220ENST00000555634 SSR3Q9UNL2 185 aa9.72□□□□□ -0.85
SHMT2-220ENST00000555634 DHDHQ9UQ10 334 aa9.72□□□□□ -0.85
SHMT2-220ENST00000555634 GSTK1Q9Y2Q3 226 aa9.72□□□□□ -0.85
SHMT2-220ENST00000555634 ZNF281Q9Y2X9 895 aa9.72□□□□□ -0.85
SHMT2-220ENST00000555634 MYO18BQ8IUG5 2567 aa9.71□□□□□ -0.85
SHMT2-220ENST00000555634 SMIM31A0A1B0GVY4 71 aa9.71□□□□□ -0.86
SHMT2-220ENST00000555634 PRR32B1ATL7 298 aa9.71□□□□□ -0.86
SHMT2-220ENST00000555634 OGG1O15527 345 aa9.71□□□□□ -0.86
SHMT2-220ENST00000555634 DBHP09172 617 aa9.71□□□□□ -0.86
SHMT2-220ENST00000555634 SLC2A1P11166 492 aa9.71□□□□□ -0.86
SHMT2-220ENST00000555634 SELEP16581 610 aa9.71□□□□□ -0.86
SHMT2-220ENST00000555634 GALP22466 123 aa9.71□□□□□ -0.86
SHMT2-220ENST00000555634 MYL9P24844 172 aa9.71□□□□□ -0.86
SHMT2-220ENST00000555634 CD40P25942 277 aa9.71□□□□□ -0.86
SHMT2-220ENST00000555634 GCH1P30793 250 aa9.71□□□□□ -0.86
SHMT2-220ENST00000555634 GP2P55259 537 aaKnown RBP9.71□□□□□ -0.86
SHMT2-220ENST00000555634 NAAAQ02083 359 aa9.71□□□□□ -0.86
SHMT2-220ENST00000555634 TPBGQ13641 420 aa9.71□□□□□ -0.86
SHMT2-220ENST00000555634 ODF4Q2M2E3 257 aa9.71□□□□□ -0.86
SHMT2-220ENST00000555634 DMKNQ6E0U4 476 aaPredicted RBP9.71□□□□□ -0.86
SHMT2-220ENST00000555634 SLC22A25Q6T423 547 aa9.71□□□□□ -0.86
SHMT2-220ENST00000555634 PGAP1Q75T13 922 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms