RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 SEMA6AQ9H2E6 1030 aa11.58□□□□□ -0.56
SNX6-203ENST00000555416 TUBG2Q9NRH3 451 aa11.58□□□□□ -0.56
SNX6-203ENST00000555416 CENPMQ9NSP4 180 aa11.58□□□□□ -0.56
SNX6-203ENST00000555416 TMEFF2Q9UIK5 374 aaPredicted RBP11.58□□□□□ -0.56
SNX6-203ENST00000555416 KLHDC2Q9Y2U9 406 aa11.58□□□□□ -0.56
SNX6-203ENST00000555416 IGHV3-64DA0A0J9YX35 117 aa11.57□□□□□ -0.56
SNX6-203ENST00000555416 KIAA1324LA8MWY0 1029 aaPredicted RBP11.57□□□□□ -0.56
SNX6-203ENST00000555416 FAM157AC9JC47 383 aa11.57□□□□□ -0.56
SNX6-203ENST00000555416 PRR23D1E9PI22 279 aaPredicted RBP11.57□□□□□ -0.56
SNX6-203ENST00000555416 G3V2T6 193 aa11.57□□□□□ -0.56
SNX6-203ENST00000555416 MLNRO43193 412 aa11.57□□□□□ -0.56
SNX6-203ENST00000555416 PRR23D2P0DMB1 279 aaPredicted RBP11.57□□□□□ -0.56
SNX6-203ENST00000555416 FASP25445 335 aa11.57□□□□□ -0.56
SNX6-203ENST00000555416 LIPAP38571 399 aa11.57□□□□□ -0.56
SNX6-203ENST00000555416 EIF2B1Q14232 305 aaKnown RBP11.57□□□□□ -0.56
SNX6-203ENST00000555416 KPNB1Q14974 876 aaKnown RBP11.57□□□□□ -0.56
SNX6-203ENST00000555416 PTGES3Q15185 160 aaKnown RBP11.57□□□□□ -0.56
SNX6-203ENST00000555416 KDM4DQ6B0I6 523 aa11.57□□□□□ -0.56
SNX6-203ENST00000555416 CCDC121Q6ZUS5 278 aa11.57□□□□□ -0.56
SNX6-203ENST00000555416 IL17RELQ6ZVW7 336 aa11.57□□□□□ -0.56
SNX6-203ENST00000555416 HIPK1Q86Z02 1210 aa11.57□□□□□ -0.56
SNX6-203ENST00000555416 PARP8Q8N3A8 854 aa11.57□□□□□ -0.56
SNX6-203ENST00000555416 OR10AD1Q8NGE0 317 aa11.57□□□□□ -0.56
SNX6-203ENST00000555416 OR2AE1Q8NHA4 323 aa11.57□□□□□ -0.56
SNX6-203ENST00000555416 ITLN1Q8WWA0 313 aa11.57□□□□□ -0.56
SNX6-203ENST00000555416 CCL17Q92583 94 aa11.57□□□□□ -0.56
SNX6-203ENST00000555416 C1orf159Q96HA4 380 aa11.57□□□□□ -0.56
SNX6-203ENST00000555416 COG8Q96MW5 612 aa11.57□□□□□ -0.56
SNX6-203ENST00000555416 INTS14Q96SY0 518 aa11.57□□□□□ -0.56
SNX6-203ENST00000555416 COPS4Q9BT78 406 aa11.57□□□□□ -0.56
SNX6-203ENST00000555416 ABHD6Q9BV23 337 aa11.57□□□□□ -0.56
SNX6-203ENST00000555416 GABARAPL1Q9H0R8 117 aa11.57□□□□□ -0.56
SNX6-203ENST00000555416 CYSLTR2Q9NS75 346 aa11.57□□□□□ -0.56
SNX6-203ENST00000555416 TVP23BQ9NYZ1 205 aa11.57□□□□□ -0.56
SNX6-203ENST00000555416 KIF17Q9P2E2 1029 aa11.57□□□□□ -0.56
SNX6-203ENST00000555416 CGGBP1Q9UFW8 167 aaPredicted RBP11.57□□□□□ -0.56
SNX6-203ENST00000555416 ZDHHC8Q9ULC8 765 aa11.57□□□□□ -0.56
SNX6-203ENST00000555416 WIPI2Q9Y4P8 454 aa11.57□□□□□ -0.56
SNX6-203ENST00000555416 SVEP1Q4LDE5 3571 aa11.57□□□□□ -0.56
SNX6-203ENST00000555416 TANC2Q9HCD6 1990 aa11.57□□□□□ -0.56
SNX6-203ENST00000555416 CCDC182A6NF36 153 aa11.56□□□□□ -0.56
SNX6-203ENST00000555416 IQCF6A8MYZ5 107 aa11.56□□□□□ -0.56
SNX6-203ENST00000555416 H3BNX3 289 aa11.56□□□□□ -0.56
SNX6-203ENST00000555416 PRKYO43930 277 aa11.56□□□□□ -0.56
SNX6-203ENST00000555416 LMX1BO60663 402 aa11.56□□□□□ -0.56
SNX6-203ENST00000555416 CIB2O75838 187 aa11.56□□□□□ -0.56
SNX6-203ENST00000555416 TGFAP01135 160 aa11.56□□□□□ -0.56
SNX6-203ENST00000555416 HMGN1P05114 100 aa11.56□□□□□ -0.56
SNX6-203ENST00000555416 POLR2IP36954 125 aaKnown RBP11.56□□□□□ -0.56
SNX6-203ENST00000555416 SLC6A9P48067 706 aa11.56□□□□□ -0.56
SNX6-203ENST00000555416 HCCSP53701 268 aa11.56□□□□□ -0.56
SNX6-203ENST00000555416 CDH15P55291 814 aa11.56□□□□□ -0.56
SNX6-203ENST00000555416 TPTEP56180 551 aa11.56□□□□□ -0.56
SNX6-203ENST00000555416 ZNF92Q03936 586 aa11.56□□□□□ -0.56
SNX6-203ENST00000555416 KLHL12Q53G59 568 aa11.56□□□□□ -0.56
SNX6-203ENST00000555416 GLYATL3Q5SZD4 288 aa11.56□□□□□ -0.56
SNX6-203ENST00000555416 ZNF771Q7L3S4 317 aaPredicted RBP11.56□□□□□ -0.56
SNX6-203ENST00000555416 CXXC5Q7LFL8 322 aaKnown RBP11.56□□□□□ -0.56
SNX6-203ENST00000555416 OR8G5Q8NG78 346 aa11.56□□□□□ -0.56
SNX6-203ENST00000555416 OR5L1Q8NGL2 311 aa11.56□□□□□ -0.56
SNX6-203ENST00000555416 HPS1Q92902 700 aa11.56□□□□□ -0.56
SNX6-203ENST00000555416 SLC30A2Q9BRI3 323 aa11.56□□□□□ -0.56
SNX6-203ENST00000555416 OAZ3Q9UMX2 235 aa11.56□□□□□ -0.56
SNX6-203ENST00000555416 N6AMT1Q9Y5N5 214 aa11.56□□□□□ -0.56
SNX6-203ENST00000555416 DYSFO75923 2080 aa11.55□□□□□ -0.56
SNX6-203ENST00000555416 CUBNO60494 3623 aa11.55□□□□□ -0.56
SNX6-203ENST00000555416 SAC3D1A6NKF1 404 aa11.55□□□□□ -0.56
SNX6-203ENST00000555416 ZNF878C9JN71 531 aa11.55□□□□□ -0.56
SNX6-203ENST00000555416 F5H5P2 479 aa11.55□□□□□ -0.56
SNX6-203ENST00000555416 HLA-DPB1P04440 258 aa11.55□□□□□ -0.56
SNX6-203ENST00000555416 SELEP16581 610 aa11.55□□□□□ -0.56
SNX6-203ENST00000555416 PAICSP22234 425 aaKnown RBP11.55□□□□□ -0.56
SNX6-203ENST00000555416 NAA10P41227 235 aaPredicted RBP11.55□□□□□ -0.56
SNX6-203ENST00000555416 BLVRAP53004 296 aa11.55□□□□□ -0.56
SNX6-203ENST00000555416 ACTR3P61158 418 aa11.55□□□□□ -0.56
SNX6-203ENST00000555416 EFNB1P98172 346 aa11.55□□□□□ -0.56
SNX6-203ENST00000555416 APOFQ13790 326 aa11.55□□□□□ -0.56
SNX6-203ENST00000555416 SNAPC1Q16533 368 aa11.55□□□□□ -0.56
SNX6-203ENST00000555416 HFEQ30201 348 aa11.55□□□□□ -0.56
SNX6-203ENST00000555416 KRTAP21-3Q3LHN1 58 aa11.55□□□□□ -0.56
SNX6-203ENST00000555416 ZMAT1Q5H9K5 638 aa11.55□□□□□ -0.56
SNX6-203ENST00000555416 FAM166AQ6J272 317 aa11.55□□□□□ -0.56
SNX6-203ENST00000555416 DRAM2Q6UX65 266 aa11.55□□□□□ -0.56
SNX6-203ENST00000555416 PRSS45Q7RTY3 260 aa11.55□□□□□ -0.56
SNX6-203ENST00000555416 ZDHHC13Q8IUH4 622 aa11.55□□□□□ -0.56
SNX6-203ENST00000555416 ZNF283Q8N7M2 679 aa11.55□□□□□ -0.56
SNX6-203ENST00000555416 RNF133Q8WVZ7 376 aa11.55□□□□□ -0.56
SNX6-203ENST00000555416 DNAJC9Q8WXX5 260 aa11.55□□□□□ -0.56
SNX6-203ENST00000555416 SPTSSAQ969W0 71 aa11.55□□□□□ -0.56
SNX6-203ENST00000555416 OR2V2Q96R30 315 aa11.55□□□□□ -0.56
SNX6-203ENST00000555416 DIRC2Q96SL1 478 aa11.55□□□□□ -0.56
SNX6-203ENST00000555416 KCNJ15Q99712 375 aa11.55□□□□□ -0.56
SNX6-203ENST00000555416 CIB1Q99828 191 aa11.55□□□□□ -0.56
SNX6-203ENST00000555416 PKP2Q99959 881 aa11.55□□□□□ -0.56
SNX6-203ENST00000555416 EGLN1Q9GZT9 426 aa11.55□□□□□ -0.56
SNX6-203ENST00000555416 LPAR2Q9HBW0 351 aa11.55□□□□□ -0.56
SNX6-203ENST00000555416 KRT84Q9NSB2 600 aa11.55□□□□□ -0.56
SNX6-203ENST00000555416 ZNF319Q9P2F9 582 aa11.55□□□□□ -0.56
SNX6-203ENST00000555416 A0A1B0GWJ7 208 aa11.54□□□□□ -0.56
SNX6-203ENST00000555416 ZAR1LA6NP61 321 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms