RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 TMPRSS11AQ6ZMR5 421 aa9.45□□□□□ -0.9
SHMT2-218ENST00000555213 C20orf204Q6ZNR8 217 aa9.45□□□□□ -0.9
SHMT2-218ENST00000555213 HIST2H3AQ71DI3 136 aa9.45□□□□□ -0.9
SHMT2-218ENST00000555213 OR6N2Q8NGY6 317 aa9.45□□□□□ -0.9
SHMT2-218ENST00000555213 AKR7LQ8NHP1 331 aa9.45□□□□□ -0.9
SHMT2-218ENST00000555213 FGFBP3Q8TAT2 258 aa9.45□□□□□ -0.9
SHMT2-218ENST00000555213 AKAP1Q92667 903 aaKnown RBP eCLIP9.45□□□□□ -0.9
SHMT2-218ENST00000555213 FBXW5Q969U6 566 aa9.45□□□□□ -0.9
SHMT2-218ENST00000555213 MS4A3Q96HJ5 214 aa9.45□□□□□ -0.9
SHMT2-218ENST00000555213 MAP6Q96JE9 813 aa9.45□□□□□ -0.9
SHMT2-218ENST00000555213 DCLRE1CQ96SD1 692 aaKnown RBP9.45□□□□□ -0.9
SHMT2-218ENST00000555213 MNTQ99583 582 aa9.45□□□□□ -0.9
SHMT2-218ENST00000555213 ABHD6Q9BV23 337 aa9.45□□□□□ -0.9
SHMT2-218ENST00000555213 TTTY10Q9BZA0 68 aa9.45□□□□□ -0.9
SHMT2-218ENST00000555213 RNF167Q9H6Y7 350 aa9.45□□□□□ -0.9
SHMT2-218ENST00000555213 UBTD1Q9HAC8 227 aa9.45□□□□□ -0.9
SHMT2-218ENST00000555213 ATPIF1Q9UII2 106 aa9.45□□□□□ -0.9
SHMT2-218ENST00000555213 GRIP1Q9Y3R0 1128 aa9.45□□□□□ -0.9
SHMT2-218ENST00000555213 LHFPL6Q9Y693 200 aa9.45□□□□□ -0.9
SHMT2-218ENST00000555213 ATP23Q9Y6H3 246 aa9.45□□□□□ -0.9
SHMT2-218ENST00000555213 MYO9AB2RTY4 2548 aa9.44□□□□□ -0.9
SHMT2-218ENST00000555213 OR6C6A6NF89 314 aa9.44□□□□□ -0.9
SHMT2-218ENST00000555213 METTL15A6NJ78 407 aa9.44□□□□□ -0.9
SHMT2-218ENST00000555213 VSTM5A8MXK1 200 aa9.44□□□□□ -0.9
SHMT2-218ENST00000555213 SHISA9B4DS77 424 aa9.44□□□□□ -0.9
SHMT2-218ENST00000555213 ZNF670-ZNF695F2Z2N8 137 aa9.44□□□□□ -0.9
SHMT2-218ENST00000555213 PLPP2O43688 288 aa9.44□□□□□ -0.9
SHMT2-218ENST00000555213 SRSF10O75494 262 aaKnown RBP9.44□□□□□ -0.9
SHMT2-218ENST00000555213 MT-ND5P03915 603 aa9.44□□□□□ -0.9
SHMT2-218ENST00000555213 COX5BP10606 129 aa9.44□□□□□ -0.9
SHMT2-218ENST00000555213 PRF1P14222 555 aa9.44□□□□□ -0.9
SHMT2-218ENST00000555213 APEX1P27695 318 aaKnown RBP9.44□□□□□ -0.9
SHMT2-218ENST00000555213 PSMB10P40306 273 aa9.44□□□□□ -0.9
SHMT2-218ENST00000555213 NANOS3P60323 173 aaKnown RBP9.44□□□□□ -0.9
SHMT2-218ENST00000555213 EGR3Q06889 387 aa9.44□□□□□ -0.9
SHMT2-218ENST00000555213 ECH1Q13011 328 aa9.44□□□□□ -0.9
SHMT2-218ENST00000555213 SPCS2Q15005 226 aa9.44□□□□□ -0.9
SHMT2-218ENST00000555213 RSPO1Q2MKA7 263 aaPredicted RBP9.44□□□□□ -0.9
SHMT2-218ENST00000555213 ELFN2Q5R3F8 820 aa9.44□□□□□ -0.9
SHMT2-218ENST00000555213 LIPNQ5VXI9 398 aa9.44□□□□□ -0.9
SHMT2-218ENST00000555213 SLC18B1Q6NT16 456 aa9.44□□□□□ -0.9
SHMT2-218ENST00000555213 ZNF774Q6NX45 483 aa9.44□□□□□ -0.9
SHMT2-218ENST00000555213 CD200R1LQ6Q8B3 271 aa9.44□□□□□ -0.9
SHMT2-218ENST00000555213 CORO6Q6QEF8 472 aa9.44□□□□□ -0.9
SHMT2-218ENST00000555213 TMEM91Q6ZNR0 172 aa9.44□□□□□ -0.9
SHMT2-218ENST00000555213 KCTD20Q7Z5Y7 419 aa9.44□□□□□ -0.9
SHMT2-218ENST00000555213 ZNF584Q8IVC4 421 aa9.44□□□□□ -0.9
SHMT2-218ENST00000555213 LINC00346Q8IVM7 164 aa9.44□□□□□ -0.9
SHMT2-218ENST00000555213 ZNF454Q8N9F8 522 aa9.44□□□□□ -0.9
SHMT2-218ENST00000555213 NUP37Q8NFH4 326 aa9.44□□□□□ -0.9
SHMT2-218ENST00000555213 OR1F12Q8NHA8 337 aa9.44□□□□□ -0.9
SHMT2-218ENST00000555213 THEM6Q8WUY1 208 aa9.44□□□□□ -0.9
SHMT2-218ENST00000555213 ZNF75AQ96N20 296 aa9.44□□□□□ -0.9
SHMT2-218ENST00000555213 OR8B4Q96RC9 309 aa9.44□□□□□ -0.9
SHMT2-218ENST00000555213 CENPOQ9BU64 300 aa9.44□□□□□ -0.9
SHMT2-218ENST00000555213 WNT5BQ9H1J7 359 aa9.44□□□□□ -0.9
SHMT2-218ENST00000555213 PNRC2Q9NPJ4 139 aaKnown RBP9.44□□□□□ -0.9
SHMT2-218ENST00000555213 NDUFB11Q9NX14 153 aa9.44□□□□□ -0.9
SHMT2-218ENST00000555213 EIF3KQ9UBQ5 218 aaKnown RBP9.44□□□□□ -0.9
SHMT2-218ENST00000555213 GDF2Q9UK05 429 aaPredicted RBP9.44□□□□□ -0.9
SHMT2-218ENST00000555213 C5orf49A4QMS7 147 aa9.43□□□□□ -0.9
SHMT2-218ENST00000555213 RER1O15258 196 aa9.43□□□□□ -0.9
SHMT2-218ENST00000555213 SULT1C4O75897 302 aa9.43□□□□□ -0.9
SHMT2-218ENST00000555213 PNPP00491 289 aa9.43□□□□□ -0.9
SHMT2-218ENST00000555213 CD1AP06126 327 aa9.43□□□□□ -0.9
SHMT2-218ENST00000555213 CELP19835 753 aa9.43□□□□□ -0.9
SHMT2-218ENST00000555213 CCNOP22674 350 aa9.43□□□□□ -0.9
SHMT2-218ENST00000555213 NCS1P62166 190 aa9.43□□□□□ -0.9
SHMT2-218ENST00000555213 RPS11P62280 158 aaKnown RBP eCLIP9.43□□□□□ -0.9
SHMT2-218ENST00000555213 RPS25P62851 125 aaKnown RBP9.43□□□□□ -0.9
SHMT2-218ENST00000555213 FABP5Q01469 135 aa9.43□□□□□ -0.9
SHMT2-218ENST00000555213 SNTB2Q13425 540 aaKnown RBP9.43□□□□□ -0.9
SHMT2-218ENST00000555213 ZNF544Q6NX49 715 aa9.43□□□□□ -0.9
SHMT2-218ENST00000555213 FDX2Q6P4F2 183 aa9.43□□□□□ -0.9
SHMT2-218ENST00000555213 PAMR1Q6UXH9 720 aa9.43□□□□□ -0.9
SHMT2-218ENST00000555213 PLEKHG7Q6ZR37 379 aa9.43□□□□□ -0.9
SHMT2-218ENST00000555213 MYPOPQ86VE0 399 aaPredicted RBP9.43□□□□□ -0.9
SHMT2-218ENST00000555213 ZNF611Q8N823 705 aa9.43□□□□□ -0.9
SHMT2-218ENST00000555213 CPEB3Q8NE35 698 aaKnown RBP9.43□□□□□ -0.9
SHMT2-218ENST00000555213 RAB2BQ8WUD1 216 aa9.43□□□□□ -0.9
SHMT2-218ENST00000555213 SNX33Q8WV41 574 aa9.43□□□□□ -0.9
SHMT2-218ENST00000555213 PPP1R14AQ96A00 147 aa9.43□□□□□ -0.9
SHMT2-218ENST00000555213 PGLYRP3Q96LB9 341 aa9.43□□□□□ -0.9
SHMT2-218ENST00000555213 COQ7Q99807 217 aa9.43□□□□□ -0.9
SHMT2-218ENST00000555213 ATF6BQ99941 703 aa9.43□□□□□ -0.9
SHMT2-218ENST00000555213 DHRS9Q9BPW9 319 aa9.43□□□□□ -0.9
SHMT2-218ENST00000555213 BCL7BQ9BQE9 202 aa9.43□□□□□ -0.9
SHMT2-218ENST00000555213 PLEKHF2Q9H8W4 249 aa9.43□□□□□ -0.9
SHMT2-218ENST00000555213 ELOVL3Q9HB03 270 aa9.43□□□□□ -0.9
SHMT2-218ENST00000555213 ACOXLQ9NUZ1 547 aa9.43□□□□□ -0.9
SHMT2-218ENST00000555213 CISD1Q9NZ45 108 aaKnown RBP9.43□□□□□ -0.9
SHMT2-218ENST00000555213 FRRS1LQ9P0K9 344 aa9.43□□□□□ -0.9
SHMT2-218ENST00000555213 LAMP5Q9UJQ1 280 aa9.43□□□□□ -0.9
SHMT2-218ENST00000555213 TMEM14AQ9Y6G1 99 aa9.43□□□□□ -0.9
SHMT2-218ENST00000555213 ADGRG4Q8IZF6 3080 aa9.42□□□□□ -0.9
SHMT2-218ENST00000555213 PNMA8CA0A1B0GUJ8 204 aa9.42□□□□□ -0.9
SHMT2-218ENST00000555213 A0A1W2PPW3 197 aa9.42□□□□□ -0.9
SHMT2-218ENST00000555213 SYNGR3O43761 229 aa9.42□□□□□ -0.9
SHMT2-218ENST00000555213 AIREO43918 545 aa9.42□□□□□ -0.9
SHMT2-218ENST00000555213 SC5DO75845 299 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms