RNA–Protein interactions for RNA: ENST00000554927.1

TUBB3-207, Transcript of tubulin beta 3 class III, humanhuman

TSL 2

Gene TUBB3, Length 561 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-207ENST00000554927 DCTN3O75935 186 aa11.06□□□□□ -0.64
TUBB3-207ENST00000554927 TXNDC12O95881 172 aa11.06□□□□□ -0.64
TUBB3-207ENST00000554927 FABP3P05413 133 aa11.06□□□□□ -0.64
TUBB3-207ENST00000554927 HSD17B1P14061 328 aa11.06□□□□□ -0.64
TUBB3-207ENST00000554927 RAC2P15153 192 aa11.06□□□□□ -0.64
TUBB3-207ENST00000554927 RPS2P15880 293 aaKnown RBP11.06□□□□□ -0.64
TUBB3-207ENST00000554927 ZNF26P17031 533 aaPredicted RBP11.06□□□□□ -0.64
TUBB3-207ENST00000554927 MDH2P40926 338 aaKnown RBP11.06□□□□□ -0.64
TUBB3-207ENST00000554927 CDK5R2Q13319 367 aa11.06□□□□□ -0.64
TUBB3-207ENST00000554927 FAM189A2Q15884 450 aa11.06□□□□□ -0.64
TUBB3-207ENST00000554927 RFX4Q33E94 735 aa11.06□□□□□ -0.64
TUBB3-207ENST00000554927 SPATS1Q496A3 300 aa11.06□□□□□ -0.64
TUBB3-207ENST00000554927 Q6YL49 198 aa11.06□□□□□ -0.64
TUBB3-207ENST00000554927 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.06□□□□□ -0.64
TUBB3-207ENST00000554927 PGAM4Q8N0Y7 254 aa11.06□□□□□ -0.64
TUBB3-207ENST00000554927 MUC20Q8N307 709 aaPredicted RBP11.06□□□□□ -0.64
TUBB3-207ENST00000554927 ZNF283Q8N7M2 679 aa11.06□□□□□ -0.64
TUBB3-207ENST00000554927 ATG16L2Q8NAA4 619 aa11.06□□□□□ -0.64
TUBB3-207ENST00000554927 OR2AJ1Q8NGZ0 328 aa11.06□□□□□ -0.64
TUBB3-207ENST00000554927 FANK1Q8TC84 345 aa11.06□□□□□ -0.64
TUBB3-207ENST00000554927 RAB40AQ8WXH6 277 aa11.06□□□□□ -0.64
TUBB3-207ENST00000554927 SAMD8Q96LT4 415 aa11.06□□□□□ -0.64
TUBB3-207ENST00000554927 IFT27Q9BW83 186 aa11.06□□□□□ -0.64
TUBB3-207ENST00000554927 SRA1Q9HD15 236 aaKnown RBP11.06□□□□□ -0.64
TUBB3-207ENST00000554927 TAGLN3Q9UI15 199 aa11.06□□□□□ -0.64
TUBB3-207ENST00000554927 ARL2BPQ9Y2Y0 163 aa11.06□□□□□ -0.64
TUBB3-207ENST00000554927 STARD10Q9Y365 291 aa11.06□□□□□ -0.64
TUBB3-207ENST00000554927 IFNL4K9M1U5 179 aa11.05□□□□□ -0.64
TUBB3-207ENST00000554927 RER1O15258 196 aa11.05□□□□□ -0.64
TUBB3-207ENST00000554927 IDH3BO43837 385 aa11.05□□□□□ -0.64
TUBB3-207ENST00000554927 CLPXO76031 633 aa11.05□□□□□ -0.64
TUBB3-207ENST00000554927 PPP1R3DO95685 299 aa11.05□□□□□ -0.64
TUBB3-207ENST00000554927 HLA-DQA2P01906 255 aa11.05□□□□□ -0.64
TUBB3-207ENST00000554927 CSF1P09603 554 aa11.05□□□□□ -0.64
TUBB3-207ENST00000554927 KITLGP21583 273 aa11.05□□□□□ -0.64
TUBB3-207ENST00000554927 FPR3P25089 353 aa11.05□□□□□ -0.64
TUBB3-207ENST00000554927 CDKN2AP42771 156 aaKnown RBP11.05□□□□□ -0.64
TUBB3-207ENST00000554927 SEC23BQ15437 767 aa11.05□□□□□ -0.64
TUBB3-207ENST00000554927 KCNMB1Q16558 191 aa11.05□□□□□ -0.64
TUBB3-207ENST00000554927 BEAN1Q3B7T3 259 aa11.05□□□□□ -0.64
TUBB3-207ENST00000554927 RUSC1-AS1Q66K80 236 aa11.05□□□□□ -0.64
TUBB3-207ENST00000554927 TMEM86BQ8N661 226 aa11.05□□□□□ -0.64
TUBB3-207ENST00000554927 FAM86B1Q8N7N1 296 aa11.05□□□□□ -0.64
TUBB3-207ENST00000554927 LINC01006Q8NI28 216 aa11.05□□□□□ -0.64
TUBB3-207ENST00000554927 MRAPQ8TCY5 172 aa11.05□□□□□ -0.64
TUBB3-207ENST00000554927 GNPDA2Q8TDQ7 276 aa11.05□□□□□ -0.64
TUBB3-207ENST00000554927 APOBEC3DQ96AK3 386 aaPredicted RBP11.05□□□□□ -0.64
TUBB3-207ENST00000554927 PLEKHA8Q96JA3 519 aa11.05□□□□□ -0.64
TUBB3-207ENST00000554927 FAM71F1Q96KD3 344 aaPredicted RBP11.05□□□□□ -0.64
TUBB3-207ENST00000554927 DHRS1Q96LJ7 313 aa11.05□□□□□ -0.64
TUBB3-207ENST00000554927 ZNF582Q96NG8 517 aaPredicted RBP11.05□□□□□ -0.64
TUBB3-207ENST00000554927 HDHD2Q9H0R4 259 aa11.05□□□□□ -0.64
TUBB3-207ENST00000554927 OR52D1Q9H346 318 aa11.05□□□□□ -0.64
TUBB3-207ENST00000554927 PRDM13Q9H4Q3 707 aa11.05□□□□□ -0.64
TUBB3-207ENST00000554927 IL19Q9UHD0 177 aa11.05□□□□□ -0.64
TUBB3-207ENST00000554927 PPP1R3CQ9UQK1 317 aa11.05□□□□□ -0.64
TUBB3-207ENST00000554927 KMT2CQ8NEZ4 4911 aaKnown RBP11.04□□□□□ -0.64
TUBB3-207ENST00000554927 ARPC3O15145 178 aa11.04□□□□□ -0.64
TUBB3-207ENST00000554927 KRT36O76013 467 aa11.04□□□□□ -0.64
TUBB3-207ENST00000554927 ZNF205O95201 554 aa11.04□□□□□ -0.64
TUBB3-207ENST00000554927 MELTFP08582 738 aa11.04□□□□□ -0.64
TUBB3-207ENST00000554927 WNT2P09544 360 aa11.04□□□□□ -0.64
TUBB3-207ENST00000554927 RRM2P31350 389 aa11.04□□□□□ -0.64
TUBB3-207ENST00000554927 PROK1P58294 105 aa11.04□□□□□ -0.64
TUBB3-207ENST00000554927 FGF12P61328 243 aa11.04□□□□□ -0.64
TUBB3-207ENST00000554927 GNGT1P63211 74 aa11.04□□□□□ -0.64
TUBB3-207ENST00000554927 PAX2Q02962 417 aa11.04□□□□□ -0.64
TUBB3-207ENST00000554927 ECH1Q13011 328 aa11.04□□□□□ -0.64
TUBB3-207ENST00000554927 CCDC92Q53HC0 331 aaPredicted RBP11.04□□□□□ -0.64
TUBB3-207ENST00000554927 PTCHD4Q6ZW05 846 aa11.04□□□□□ -0.64
TUBB3-207ENST00000554927 REC114Q7Z4M0 266 aa11.04□□□□□ -0.64
TUBB3-207ENST00000554927 KLBQ86Z14 1044 aa11.04□□□□□ -0.64
TUBB3-207ENST00000554927 LINC00471Q8N535 108 aa11.04□□□□□ -0.64
TUBB3-207ENST00000554927 OR52L1Q8NGH7 329 aa11.04□□□□□ -0.64
TUBB3-207ENST00000554927 OR13G1Q8NGZ3 307 aa11.04□□□□□ -0.64
TUBB3-207ENST00000554927 TBC1D15Q8TC07 691 aa11.04□□□□□ -0.64
TUBB3-207ENST00000554927 SSMEM1Q8WWF3 244 aa11.04□□□□□ -0.64
TUBB3-207ENST00000554927 DYRK2Q92630 601 aa11.04□□□□□ -0.64
TUBB3-207ENST00000554927 NMNAT3Q96T66 252 aa11.04□□□□□ -0.64
TUBB3-207ENST00000554927 COQ7Q99807 217 aa11.04□□□□□ -0.64
TUBB3-207ENST00000554927 NUDT16L1Q9BRJ7 211 aaKnown RBP11.04□□□□□ -0.64
TUBB3-207ENST00000554927 HCAR1Q9BXC0 346 aa11.04□□□□□ -0.64
TUBB3-207ENST00000554927 IL1RAPQ9NPH3 570 aa11.04□□□□□ -0.64
TUBB3-207ENST00000554927 KIF17Q9P2E2 1029 aa11.04□□□□□ -0.64
TUBB3-207ENST00000554927 B9D1Q9UPM9 204 aa11.04□□□□□ -0.64
TUBB3-207ENST00000554927 POMT1Q9Y6A1 747 aa11.04□□□□□ -0.64
TUBB3-207ENST00000554927 ARPC2O15144 300 aa11.03□□□□□ -0.64
TUBB3-207ENST00000554927 GPR137BO60478 399 aa11.03□□□□□ -0.64
TUBB3-207ENST00000554927 ZNF823P16415 610 aa11.03□□□□□ -0.64
TUBB3-207ENST00000554927 MSX2P35548 267 aaPredicted RBP11.03□□□□□ -0.64
TUBB3-207ENST00000554927 SRP9P49458 86 aaKnown RBP11.03□□□□□ -0.64
TUBB3-207ENST00000554927 RPL15P61313 204 aaKnown RBP11.03□□□□□ -0.64
TUBB3-207ENST00000554927 MALLQ13021 153 aa11.03□□□□□ -0.64
TUBB3-207ENST00000554927 RPL13AP3Q6NVV1 102 aa11.03□□□□□ -0.64
TUBB3-207ENST00000554927 ZDHHC21Q8IVQ6 265 aa11.03□□□□□ -0.64
TUBB3-207ENST00000554927 DEFB107AQ8IZN7 70 aa11.03□□□□□ -0.64
TUBB3-207ENST00000554927 OR8G5Q8NG78 346 aa11.03□□□□□ -0.64
TUBB3-207ENST00000554927 OR4K13Q8NH42 304 aa11.03□□□□□ -0.64
TUBB3-207ENST00000554927 ITLN1Q8WWA0 313 aa11.03□□□□□ -0.64
TUBB3-207ENST00000554927 SLC7A6Q92536 515 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms