RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 DLEU1O43261 78 aa14.04□□□□□ -0.16
SYNE3-203ENST00000554873 GMFGO60234 142 aa14.04□□□□□ -0.16
SYNE3-203ENST00000554873 TIMP1P01033 207 aa14.04□□□□□ -0.16
SYNE3-203ENST00000554873 CSN2P05814 226 aa14.04□□□□□ -0.16
SYNE3-203ENST00000554873 CFPP27918 469 aa14.04□□□□□ -0.16
SYNE3-203ENST00000554873 FHL1Q13642 323 aa14.04□□□□□ -0.16
SYNE3-203ENST00000554873 SLC10A1Q14973 349 aa14.04□□□□□ -0.16
SYNE3-203ENST00000554873 JOSD1Q15040 202 aaPredicted RBP14.04□□□□□ -0.16
SYNE3-203ENST00000554873 CST6Q15828 149 aa14.04□□□□□ -0.16
SYNE3-203ENST00000554873 C2orf76Q3KRA6 126 aa14.04□□□□□ -0.16
SYNE3-203ENST00000554873 TMEFF1Q8IYR6 380 aa14.04□□□□□ -0.16
SYNE3-203ENST00000554873 COX18Q8N8Q8 333 aa14.04□□□□□ -0.16
SYNE3-203ENST00000554873 OR9A4Q8NGU2 314 aa14.04□□□□□ -0.16
SYNE3-203ENST00000554873 TERB2Q8NHR7 220 aa14.04□□□□□ -0.16
SYNE3-203ENST00000554873 RNF166Q96A37 237 aaPredicted RBP14.04□□□□□ -0.16
SYNE3-203ENST00000554873 CCDC74AQ96AQ1 378 aa14.04□□□□□ -0.16
SYNE3-203ENST00000554873 BSCL2Q96G97 398 aaPredicted RBP14.04□□□□□ -0.16
SYNE3-203ENST00000554873 SLC17A4Q9Y2C5 497 aa14.04□□□□□ -0.16
SYNE3-203ENST00000554873 TMED7Q9Y3B3 224 aa14.04□□□□□ -0.16
SYNE3-203ENST00000554873 LOC100289279A0A1B0GTE1 492 aa14.04□□□□□ -0.16
SYNE3-203ENST00000554873 LINC00614P0C842 121 aa14.04□□□□□ -0.16
SYNE3-203ENST00000554873 PBX2P40425 430 aa14.04□□□□□ -0.16
SYNE3-203ENST00000554873 DIO1P49895 249 aa14.04□□□□□ -0.16
SYNE3-203ENST00000554873 GNG10P50151 68 aa14.04□□□□□ -0.16
SYNE3-203ENST00000554873 UCP2P55851 309 aa14.04□□□□□ -0.16
SYNE3-203ENST00000554873 GAGE1Q13065 139 aa14.04□□□□□ -0.16
SYNE3-203ENST00000554873 EBPQ15125 230 aaKnown RBP14.04□□□□□ -0.16
SYNE3-203ENST00000554873 LANCL3Q6ZV70 420 aa14.04□□□□□ -0.16
SYNE3-203ENST00000554873 C12orf76Q8N812 135 aaPredicted RBP14.04□□□□□ -0.16
SYNE3-203ENST00000554873 OR13D1Q8NGV5 346 aa14.04□□□□□ -0.16
SYNE3-203ENST00000554873 SLC22A18Q96BI1 424 aa14.04□□□□□ -0.16
SYNE3-203ENST00000554873 SRMSQ9H3Y6 488 aa14.04□□□□□ -0.16
SYNE3-203ENST00000554873 OR5AC2Q9NZP5 309 aa14.04□□□□□ -0.16
SYNE3-203ENST00000554873 DNAJB11Q9UBS4 358 aa14.04□□□□□ -0.16
SYNE3-203ENST00000554873 CSTBP04080 98 aaKnown RBP14.03□□□□□ -0.16
SYNE3-203ENST00000554873 NGFRP08138 427 aa14.03□□□□□ -0.16
SYNE3-203ENST00000554873 SLC6A6P31641 620 aa14.03□□□□□ -0.16
SYNE3-203ENST00000554873 IGFALSP35858 605 aa14.03□□□□□ -0.16
SYNE3-203ENST00000554873 RPS15AP62244 130 aaKnown RBP14.03□□□□□ -0.16
SYNE3-203ENST00000554873 EXOSC6Q5RKV6 272 aaKnown RBP14.03□□□□□ -0.16
SYNE3-203ENST00000554873 C1orf53Q5VUE5 145 aa14.03□□□□□ -0.16
SYNE3-203ENST00000554873 TMEM268Q5VZI3 342 aa14.03□□□□□ -0.16
SYNE3-203ENST00000554873 ZAR1Q86SH2 424 aa14.03□□□□□ -0.16
SYNE3-203ENST00000554873 OR4K13Q8NH42 304 aa14.03□□□□□ -0.16
SYNE3-203ENST00000554873 FAM3DQ96BQ1 224 aa14.03□□□□□ -0.16
SYNE3-203ENST00000554873 SLC35B3Q9H1N7 401 aa14.03□□□□□ -0.16
SYNE3-203ENST00000554873 FLRT3Q9NZU0 649 aa14.03□□□□□ -0.16
SYNE3-203ENST00000554873 OR14J1Q9UGF5 321 aa14.03□□□□□ -0.16
SYNE3-203ENST00000554873 SERTAD3Q9UJW9 196 aa14.03□□□□□ -0.16
SYNE3-203ENST00000554873 DAPP1Q9UN19 280 aa14.03□□□□□ -0.16
SYNE3-203ENST00000554873 SYT7O43581 403 aa14.03□□□□□ -0.16
SYNE3-203ENST00000554873 LDB3O75112 727 aa14.03□□□□□ -0.16
SYNE3-203ENST00000554873 EML2O95834 649 aa14.03□□□□□ -0.16
SYNE3-203ENST00000554873 ERCC1P07992 297 aaPredicted RBP14.03□□□□□ -0.16
SYNE3-203ENST00000554873 SMIM10L1P0DMW3 83 aa14.03□□□□□ -0.16
SYNE3-203ENST00000554873 ARRB1P49407 418 aaPredicted RBP14.03□□□□□ -0.16
SYNE3-203ENST00000554873 MOGAT2Q3SYC2 334 aa14.03□□□□□ -0.16
SYNE3-203ENST00000554873 MIDNQ504T8 468 aa14.03□□□□□ -0.16
SYNE3-203ENST00000554873 C2orf27AQ580R0 203 aa14.03□□□□□ -0.16
SYNE3-203ENST00000554873 GGNBP1Q5YKI7 109 aa14.03□□□□□ -0.16
SYNE3-203ENST00000554873 OR2T2Q6IF00 324 aa14.03□□□□□ -0.16
SYNE3-203ENST00000554873 SPRED2Q7Z698 418 aa14.03□□□□□ -0.16
SYNE3-203ENST00000554873 NT5CQ8TCD5 201 aa14.03□□□□□ -0.16
SYNE3-203ENST00000554873 SMIM10Q96HG1 83 aa14.03□□□□□ -0.16
SYNE3-203ENST00000554873 Q96M85 177 aa14.03□□□□□ -0.16
SYNE3-203ENST00000554873 PTCHD1Q96NR3 888 aa14.03□□□□□ -0.16
SYNE3-203ENST00000554873 SNHG12Q9BXW3 62 aa14.03□□□□□ -0.16
SYNE3-203ENST00000554873 RIMS4Q9H426 269 aaPredicted RBP14.03□□□□□ -0.16
SYNE3-203ENST00000554873 KCNK15Q9H427 330 aa14.03□□□□□ -0.16
SYNE3-203ENST00000554873 KIR3DX1Q9H7L2 352 aa14.03□□□□□ -0.16
SYNE3-203ENST00000554873 FBXL21Q9UKT6 434 aa14.03□□□□□ -0.16
SYNE3-203ENST00000554873 ATG2BQ96BY7 2078 aa14.02□□□□□ -0.16
SYNE3-203ENST00000554873 TRBV5-7A0A0A0MS05 114 aa14.02□□□□□ -0.16
SYNE3-203ENST00000554873 ZNF860A6NHJ4 632 aa14.02□□□□□ -0.16
SYNE3-203ENST00000554873 DVL1O14640 695 aa14.02□□□□□ -0.16
SYNE3-203ENST00000554873 EFSO43281 561 aa14.02□□□□□ -0.16
SYNE3-203ENST00000554873 CST4P01036 141 aa14.02□□□□□ -0.16
SYNE3-203ENST00000554873 TLX1P31314 330 aaPredicted RBP14.02□□□□□ -0.16
SYNE3-203ENST00000554873 MAP3K8P41279 467 aa14.02□□□□□ -0.16
SYNE3-203ENST00000554873 RAB11BQ15907 218 aa14.02□□□□□ -0.16
SYNE3-203ENST00000554873 ZNF563Q8TA94 476 aa14.02□□□□□ -0.16
SYNE3-203ENST00000554873 RBM18Q96H35 190 aaKnown RBP14.02□□□□□ -0.16
SYNE3-203ENST00000554873 SERINC2Q96SA4 455 aa14.02□□□□□ -0.16
SYNE3-203ENST00000554873 DNAH14Q0VDD8 3507 aa14.02□□□□□ -0.16
SYNE3-203ENST00000554873 A0A0B4J2E0 115 aa14.02□□□□□ -0.17
SYNE3-203ENST00000554873 A0A1B0GWA3 101 aa14.02□□□□□ -0.17
SYNE3-203ENST00000554873 A0A1B0GX12 115 aa14.02□□□□□ -0.17
SYNE3-203ENST00000554873 RPP14O95059 124 aaKnown RBP14.02□□□□□ -0.17
SYNE3-203ENST00000554873 QDPRP09417 244 aa14.02□□□□□ -0.17
SYNE3-203ENST00000554873 HIST1H1CP16403 213 aaKnown RBP14.02□□□□□ -0.17
SYNE3-203ENST00000554873 GABRA3P34903 492 aa14.02□□□□□ -0.17
SYNE3-203ENST00000554873 SGCGQ13326 291 aa14.02□□□□□ -0.17
SYNE3-203ENST00000554873 EXOSC7Q15024 291 aaKnown RBP14.02□□□□□ -0.17
SYNE3-203ENST00000554873 VITQ6UXI7 678 aa14.02□□□□□ -0.17
SYNE3-203ENST00000554873 ZNF627Q7L945 461 aa14.02□□□□□ -0.17
SYNE3-203ENST00000554873 LRRC18Q8N456 261 aa14.02□□□□□ -0.17
SYNE3-203ENST00000554873 ZNF615Q8N8J6 731 aa14.02□□□□□ -0.17
SYNE3-203ENST00000554873 OR9K2Q8NGE7 335 aa14.02□□□□□ -0.17
SYNE3-203ENST00000554873 SLC25A43Q8WUT9 341 aaPredicted RBP14.02□□□□□ -0.17
SYNE3-203ENST00000554873 ZNRF4Q8WWF5 429 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms