RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 G6PC2Q9NQR9 355 aa12.49□□□□□ -0.41
SHOX2-206ENST00000554685 ENPP5Q9UJA9 477 aa12.49□□□□□ -0.41
SHOX2-206ENST00000554685 SSR3Q9UNL2 185 aa12.49□□□□□ -0.41
SHOX2-206ENST00000554685 ZNF281Q9Y2X9 895 aa12.49□□□□□ -0.41
SHOX2-206ENST00000554685 SIRT4Q9Y6E7 314 aaPredicted RBP12.49□□□□□ -0.41
SHOX2-206ENST00000554685 RP1L1Q8IWN7 2480 aaPredicted RBP12.49□□□□□ -0.41
SHOX2-206ENST00000554685 A0A1W2PR80 420 aa12.48□□□□□ -0.41
SHOX2-206ENST00000554685 C5orf49A4QMS7 147 aa12.48□□□□□ -0.41
SHOX2-206ENST00000554685 A6NHS1 94 aa12.48□□□□□ -0.41
SHOX2-206ENST00000554685 ZNF701M0R085 212 aaPredicted RBP12.48□□□□□ -0.41
SHOX2-206ENST00000554685 AIREO43918 545 aa12.48□□□□□ -0.41
SHOX2-206ENST00000554685 RGS9O75916 674 aaPredicted RBP12.48□□□□□ -0.41
SHOX2-206ENST00000554685 ZFPL1O95159 310 aa12.48□□□□□ -0.41
SHOX2-206ENST00000554685 IGLV1-44P01699 117 aa12.48□□□□□ -0.41
SHOX2-206ENST00000554685 ISG15P05161 165 aa12.48□□□□□ -0.41
SHOX2-206ENST00000554685 DBHP09172 617 aa12.48□□□□□ -0.41
SHOX2-206ENST00000554685 ZNF12P17014 697 aa12.48□□□□□ -0.41
SHOX2-206ENST00000554685 ACHEP22303 614 aa12.48□□□□□ -0.41
SHOX2-206ENST00000554685 MAPK3P27361 379 aaPredicted RBP12.48□□□□□ -0.41
SHOX2-206ENST00000554685 CCKARP32238 428 aa12.48□□□□□ -0.41
SHOX2-206ENST00000554685 PEX19P40855 299 aa12.48□□□□□ -0.41
SHOX2-206ENST00000554685 KIR3DL2P43630 455 aa12.48□□□□□ -0.41
SHOX2-206ENST00000554685 FAM57BQ71RH2 274 aa12.48□□□□□ -0.41
SHOX2-206ENST00000554685 PRSS35Q8N3Z0 413 aa12.48□□□□□ -0.41
SHOX2-206ENST00000554685 GPR148Q8TDV2 347 aa12.48□□□□□ -0.41
SHOX2-206ENST00000554685 SLC7A6Q92536 515 aa12.48□□□□□ -0.41
SHOX2-206ENST00000554685 ITFG2Q969R8 447 aa12.48□□□□□ -0.41
SHOX2-206ENST00000554685 TMED9Q9BVK6 235 aa12.48□□□□□ -0.41
SHOX2-206ENST00000554685 C1QTNF5Q9BXJ0 243 aa12.48□□□□□ -0.41
SHOX2-206ENST00000554685 RGCCQ9H4X1 137 aa12.48□□□□□ -0.41
SHOX2-206ENST00000554685 NGBQ9NPG2 151 aa12.48□□□□□ -0.41
SHOX2-206ENST00000554685 EIF3KQ9UBQ5 218 aaKnown RBP12.48□□□□□ -0.41
SHOX2-206ENST00000554685 NDRG3Q9UGV2 375 aa12.48□□□□□ -0.41
SHOX2-206ENST00000554685 GSTK1Q9Y2Q3 226 aa12.48□□□□□ -0.41
SHOX2-206ENST00000554685 SF3B6Q9Y3B4 125 aaKnown RBP12.48□□□□□ -0.41
SHOX2-206ENST00000554685 LOC100509620A0A075B734 347 aa12.47□□□□□ -0.41
SHOX2-206ENST00000554685 A0A0U1RQV5 110 aa12.47□□□□□ -0.41
SHOX2-206ENST00000554685 A0A1B0GVI7 797 aa12.47□□□□□ -0.41
SHOX2-206ENST00000554685 TRDV1A0A1B0GX56 115 aa12.47□□□□□ -0.41
SHOX2-206ENST00000554685 TBX1O43435 398 aa12.47□□□□□ -0.41
SHOX2-206ENST00000554685 XRCC2O43543 280 aa12.47□□□□□ -0.41
SHOX2-206ENST00000554685 GATBO75879 557 aaKnown RBP12.47□□□□□ -0.41
SHOX2-206ENST00000554685 GABARAPO95166 117 aa12.47□□□□□ -0.41
SHOX2-206ENST00000554685 CLDN14O95500 239 aa12.47□□□□□ -0.41
SHOX2-206ENST00000554685 LCATP04180 440 aa12.47□□□□□ -0.41
SHOX2-206ENST00000554685 SLC2A1P11166 492 aa12.47□□□□□ -0.41
SHOX2-206ENST00000554685 CCNOP22674 350 aa12.47□□□□□ -0.41
SHOX2-206ENST00000554685 CFL1P23528 166 aaKnown RBP12.47□□□□□ -0.41
SHOX2-206ENST00000554685 GADD45AP24522 165 aa12.47□□□□□ -0.41
SHOX2-206ENST00000554685 RPS25P62851 125 aaKnown RBP12.47□□□□□ -0.41
SHOX2-206ENST00000554685 TAB1Q15750 504 aa12.47□□□□□ -0.41
SHOX2-206ENST00000554685 RSPO1Q2MKA7 263 aaPredicted RBP12.47□□□□□ -0.41
SHOX2-206ENST00000554685 CD200R1LQ6Q8B3 271 aa12.47□□□□□ -0.41
SHOX2-206ENST00000554685 PRSS45Q7RTY3 260 aa12.47□□□□□ -0.41
SHOX2-206ENST00000554685 ZNF584Q8IVC4 421 aa12.47□□□□□ -0.41
SHOX2-206ENST00000554685 C1orf174Q8IYL3 243 aa12.47□□□□□ -0.41
SHOX2-206ENST00000554685 OR8B12Q8NGG6 310 aa12.47□□□□□ -0.41
SHOX2-206ENST00000554685 OR5L1Q8NGL2 311 aa12.47□□□□□ -0.41
SHOX2-206ENST00000554685 ITLN2Q8WWU7 325 aaPredicted RBP12.47□□□□□ -0.41
SHOX2-206ENST00000554685 PHYHIPQ92561 330 aa12.47□□□□□ -0.41
SHOX2-206ENST00000554685 APOBEC3DQ96AK3 386 aaPredicted RBP12.47□□□□□ -0.41
SHOX2-206ENST00000554685 KCNS3Q9BQ31 491 aa12.47□□□□□ -0.41
SHOX2-206ENST00000554685 PDCD1LG2Q9BQ51 273 aa12.47□□□□□ -0.41
SHOX2-206ENST00000554685 MED18Q9BUE0 208 aa12.47□□□□□ -0.41
SHOX2-206ENST00000554685 OPA3Q9H6K4 179 aa12.47□□□□□ -0.41
SHOX2-206ENST00000554685 EXOSC4Q9NPD3 245 aaKnown RBP12.47□□□□□ -0.41
SHOX2-206ENST00000554685 TBCCD1Q9NVR7 557 aa12.47□□□□□ -0.41
SHOX2-206ENST00000554685 RSL24D1Q9UHA3 163 aaKnown RBP12.47□□□□□ -0.41
SHOX2-206ENST00000554685 HHLA2Q9UM44 414 aa12.47□□□□□ -0.41
SHOX2-206ENST00000554685 SLC22A13Q9Y226 551 aa12.47□□□□□ -0.41
SHOX2-206ENST00000554685 CEPT1Q9Y6K0 416 aa12.47□□□□□ -0.41
SHOX2-206ENST00000554685 KALRNO60229 2985 aa12.46□□□□□ -0.41
SHOX2-206ENST00000554685 NKX2-6A6NCS4 301 aa12.46□□□□□ -0.41
SHOX2-206ENST00000554685 H3BSA7 217 aa12.46□□□□□ -0.41
SHOX2-206ENST00000554685 ZG16O60844 167 aa12.46□□□□□ -0.41
SHOX2-206ENST00000554685 AGFG2O95081 481 aa12.46□□□□□ -0.41
SHOX2-206ENST00000554685 TTRP02766 147 aa12.46□□□□□ -0.41
SHOX2-206ENST00000554685 CECR9P0C854 216 aa12.46□□□□□ -0.41
SHOX2-206ENST00000554685 TUBG1P23258 451 aa12.46□□□□□ -0.41
SHOX2-206ENST00000554685 PCSK6P29122 969 aa12.46□□□□□ -0.41
SHOX2-206ENST00000554685 MALLQ13021 153 aa12.46□□□□□ -0.41
SHOX2-206ENST00000554685 COLCA1Q6ZS62 124 aa12.46□□□□□ -0.41
SHOX2-206ENST00000554685 COMMD2Q86X83 199 aa12.46□□□□□ -0.41
SHOX2-206ENST00000554685 ABHD4Q8TB40 342 aa12.46□□□□□ -0.41
SHOX2-206ENST00000554685 AKAP1Q92667 903 aaKnown RBP eCLIP12.46□□□□□ -0.41
SHOX2-206ENST00000554685 TMEM203Q969S6 136 aa12.46□□□□□ -0.41
SHOX2-206ENST00000554685 DGCR14Q96DF8 476 aaKnown RBP12.46□□□□□ -0.41
SHOX2-206ENST00000554685 HS3ST6Q96QI5 342 aa12.46□□□□□ -0.41
SHOX2-206ENST00000554685 CHCHD6Q9BRQ6 235 aa12.46□□□□□ -0.41
SHOX2-206ENST00000554685 RBM38Q9H0Z9 239 aaKnown RBP12.46□□□□□ -0.41
SHOX2-206ENST00000554685 SLC24A3Q9HC58 644 aa12.46□□□□□ -0.41
SHOX2-206ENST00000554685 TUBG2Q9NRH3 451 aa12.46□□□□□ -0.41
SHOX2-206ENST00000554685 N6AMT1Q9Y5N5 214 aa12.46□□□□□ -0.41
SHOX2-206ENST00000554685 IGHV1-18A0A0C4DH31 117 aa12.45□□□□□ -0.42
SHOX2-206ENST00000554685 LOC100506127A0A0U1RQW1 187 aa12.45□□□□□ -0.42
SHOX2-206ENST00000554685 LOC107986453A0A1B0GWG9 222 aa12.45□□□□□ -0.42
SHOX2-206ENST00000554685 M0R1B8 84 aa12.45□□□□□ -0.42
SHOX2-206ENST00000554685 GABRPO00591 440 aa12.45□□□□□ -0.42
SHOX2-206ENST00000554685 SYT7O43581 403 aa12.45□□□□□ -0.42
SHOX2-206ENST00000554685 ICMTO60725 284 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms