RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 C11orf91Q3C1V1 193 aa10.81□□□□□ -0.68
SHMT2-214ENST00000554604 MESTQ5EB52 335 aa10.81□□□□□ -0.68
SHMT2-214ENST00000554604 SPANXN2Q5MJ10 180 aa10.81□□□□□ -0.68
SHMT2-214ENST00000554604 DMKNQ6E0U4 476 aaPredicted RBP10.81□□□□□ -0.68
SHMT2-214ENST00000554604 ANKRD16Q6P6B7 361 aa10.81□□□□□ -0.68
SHMT2-214ENST00000554604 TMEM91Q6ZNR0 172 aa10.81□□□□□ -0.68
SHMT2-214ENST00000554604 DTX2Q86UW9 622 aa10.81□□□□□ -0.68
SHMT2-214ENST00000554604 CENPSQ8N2Z9 138 aa10.81□□□□□ -0.68
SHMT2-214ENST00000554604 MUC15Q8N387 334 aa10.81□□□□□ -0.68
SHMT2-214ENST00000554604 PARP16Q8N5Y8 322 aa10.81□□□□□ -0.68
SHMT2-214ENST00000554604 OR2T4Q8NH00 348 aa10.81□□□□□ -0.68
SHMT2-214ENST00000554604 CEP19Q96LK0 163 aa10.81□□□□□ -0.68
SHMT2-214ENST00000554604 MNTQ99583 582 aa10.81□□□□□ -0.68
SHMT2-214ENST00000554604 ALG12Q9BV10 488 aa10.81□□□□□ -0.68
SHMT2-214ENST00000554604 INIPQ9NRY2 104 aa10.81□□□□□ -0.68
SHMT2-214ENST00000554604 MRPL39Q9NYK5 338 aaKnown RBP10.81□□□□□ -0.68
SHMT2-214ENST00000554604 TAS2R5Q9NYW4 299 aa10.81□□□□□ -0.68
SHMT2-214ENST00000554604 SIRT4Q9Y6E7 314 aaPredicted RBP10.81□□□□□ -0.68
SHMT2-214ENST00000554604 SONP18583 2426 aaKnown RBP10.81□□□□□ -0.68
SHMT2-214ENST00000554604 ZNF726A6NNF4 738 aa10.8□□□□□ -0.68
SHMT2-214ENST00000554604 MS4A18H0YCH9 400 aa10.8□□□□□ -0.68
SHMT2-214ENST00000554604 J3QLW9 94 aa10.8□□□□□ -0.68
SHMT2-214ENST00000554604 CTDSP2O14595 271 aa10.8□□□□□ -0.68
SHMT2-214ENST00000554604 TRAF3IP2O43734 574 aaPredicted RBP10.8□□□□□ -0.68
SHMT2-214ENST00000554604 SERPINI2O75830 405 aa10.8□□□□□ -0.68
SHMT2-214ENST00000554604 CD8AP01732 235 aa10.8□□□□□ -0.68
SHMT2-214ENST00000554604 CLEC2LP0C7M8 214 aa10.8□□□□□ -0.68
SHMT2-214ENST00000554604 ZNF19P17023 458 aa10.8□□□□□ -0.68
SHMT2-214ENST00000554604 AHCYP23526 432 aa10.8□□□□□ -0.68
SHMT2-214ENST00000554604 TNFSF8P32971 234 aa10.8□□□□□ -0.68
SHMT2-214ENST00000554604 MTNR1BP49286 362 aa10.8□□□□□ -0.68
SHMT2-214ENST00000554604 CENPAP49450 140 aa10.8□□□□□ -0.68
SHMT2-214ENST00000554604 GBX2P52951 348 aaPredicted RBP10.8□□□□□ -0.68
SHMT2-214ENST00000554604 OR12D2P58182 307 aa10.8□□□□□ -0.68
SHMT2-214ENST00000554604 ARF1P84077 181 aaKnown RBP10.8□□□□□ -0.68
SHMT2-214ENST00000554604 MXD1Q05195 221 aa10.8□□□□□ -0.68
SHMT2-214ENST00000554604 ZP4Q12836 540 aa10.8□□□□□ -0.68
SHMT2-214ENST00000554604 MS4A18Q3C1V0 323 aa10.8□□□□□ -0.68
SHMT2-214ENST00000554604 CCDC58Q4VC31 144 aa10.8□□□□□ -0.68
SHMT2-214ENST00000554604 CARD17Q5XLA6 110 aa10.8□□□□□ -0.68
SHMT2-214ENST00000554604 LINGO2Q7L985 606 aa10.8□□□□□ -0.68
SHMT2-214ENST00000554604 SSX6Q7RTT6 188 aa10.8□□□□□ -0.68
SHMT2-214ENST00000554604 SLC16A9Q7RTY1 509 aa10.8□□□□□ -0.68
SHMT2-214ENST00000554604 MS4A15Q8N5U1 240 aa10.8□□□□□ -0.68
SHMT2-214ENST00000554604 SYT14Q8NB59 555 aa10.8□□□□□ -0.68
SHMT2-214ENST00000554604 OR6K6Q8NGW6 343 aa10.8□□□□□ -0.68
SHMT2-214ENST00000554604 HAVCR2Q8TDQ0 301 aa10.8□□□□□ -0.68
SHMT2-214ENST00000554604 ZNRF4Q8WWF5 429 aa10.8□□□□□ -0.68
SHMT2-214ENST00000554604 BCL2L2Q92843 193 aaPredicted RBP10.8□□□□□ -0.68
SHMT2-214ENST00000554604 BOD1Q96IK1 185 aa10.8□□□□□ -0.68
SHMT2-214ENST00000554604 ADAD1Q96M93 576 aaKnown RBP10.8□□□□□ -0.68
SHMT2-214ENST00000554604 OR2M2Q96R28 347 aa10.8□□□□□ -0.68
SHMT2-214ENST00000554604 SLC30A2Q9BRI3 323 aa10.8□□□□□ -0.68
SHMT2-214ENST00000554604 CCDC32Q9BV29 185 aa10.8□□□□□ -0.68
SHMT2-214ENST00000554604 MARCH7Q9H992 704 aa10.8□□□□□ -0.68
SHMT2-214ENST00000554604 BARX1Q9HBU1 254 aaPredicted RBP10.8□□□□□ -0.68
SHMT2-214ENST00000554604 CRLF2Q9HC73 371 aa10.8□□□□□ -0.68
SHMT2-214ENST00000554604 GPR35Q9HC97 309 aa10.8□□□□□ -0.68
SHMT2-214ENST00000554604 MOV10Q9HCE1 1003 aaKnown RBP10.8□□□□□ -0.68
SHMT2-214ENST00000554604 B3GAT2Q9NPZ5 323 aa10.8□□□□□ -0.68
SHMT2-214ENST00000554604 RPRD1BQ9NQG5 326 aaKnown RBP10.8□□□□□ -0.68
SHMT2-214ENST00000554604 CBLN4Q9NTU7 201 aa10.8□□□□□ -0.68
SHMT2-214ENST00000554604 ZNF346Q9UL40 294 aaKnown RBP10.8□□□□□ -0.68
SHMT2-214ENST00000554604 CMAHPQ9Y471 501 aa10.8□□□□□ -0.68
SHMT2-214ENST00000554604 CR1P17927 2039 aa10.8□□□□□ -0.68
SHMT2-214ENST00000554604 FN1P02751 2386 aaKnown RBP10.8□□□□□ -0.68
SHMT2-214ENST00000554604 NPIPB13A6NJU9 1138 aa10.79□□□□□ -0.68
SHMT2-214ENST00000554604 NPIPB4C9JG80 1138 aa10.79□□□□□ -0.68
SHMT2-214ENST00000554604 E9PI62 339 aa10.79□□□□□ -0.68
SHMT2-214ENST00000554604 C11orf98E9PRG8 122 aa10.79□□□□□ -0.68
SHMT2-214ENST00000554604 ATP6V1G2-DDX39BF2Z307 99 aa10.79□□□□□ -0.68
SHMT2-214ENST00000554604 RPL36A-HNRNPH2H7BZ11 118 aa10.79□□□□□ -0.68
SHMT2-214ENST00000554604 PLPP3O14495 311 aa10.79□□□□□ -0.68
SHMT2-214ENST00000554604 SELENOFO60613 162 aa10.79□□□□□ -0.68
SHMT2-214ENST00000554604 SC5DO75845 299 aa10.79□□□□□ -0.68
SHMT2-214ENST00000554604 LY6G6DO95868 133 aa10.79□□□□□ -0.68
SHMT2-214ENST00000554604 SERPINA3P01011 423 aa10.79□□□□□ -0.68
SHMT2-214ENST00000554604 CRYAAP02489 173 aa10.79□□□□□ -0.68
SHMT2-214ENST00000554604 HEXAP06865 529 aa10.79□□□□□ -0.68
SHMT2-214ENST00000554604 OCM2P0CE71 109 aa10.79□□□□□ -0.68
SHMT2-214ENST00000554604 OCMP0CE72 109 aaPredicted RBP10.79□□□□□ -0.68
SHMT2-214ENST00000554604 HLA-DOBP13765 273 aa10.79□□□□□ -0.68
SHMT2-214ENST00000554604 HOXB1P14653 301 aaPredicted RBP10.79□□□□□ -0.68
SHMT2-214ENST00000554604 PYCR1P32322 319 aa10.79□□□□□ -0.68
SHMT2-214ENST00000554604 ACVR1BP36896 505 aa10.79□□□□□ -0.68
SHMT2-214ENST00000554604 NAA10P41227 235 aaPredicted RBP10.79□□□□□ -0.68
SHMT2-214ENST00000554604 TGM4P49221 684 aa10.79□□□□□ -0.68
SHMT2-214ENST00000554604 RPL27P61353 136 aaKnown RBP10.79□□□□□ -0.68
SHMT2-214ENST00000554604 DBPQ10586 325 aaPredicted RBP10.79□□□□□ -0.68
SHMT2-214ENST00000554604 MRPL28Q13084 256 aaKnown RBP10.79□□□□□ -0.68
SHMT2-214ENST00000554604 TNK1Q13470 666 aa10.79□□□□□ -0.68
SHMT2-214ENST00000554604 OXA1LQ15070 435 aa10.79□□□□□ -0.68
SHMT2-214ENST00000554604 CDK5R1Q15078 307 aa10.79□□□□□ -0.68
SHMT2-214ENST00000554604 CEACAM16Q2WEN9 425 aa10.79□□□□□ -0.68
SHMT2-214ENST00000554604 TP53I3Q53FA7 332 aa10.79□□□□□ -0.68
SHMT2-214ENST00000554604 ZNF544Q6NX49 715 aa10.79□□□□□ -0.68
SHMT2-214ENST00000554604 RPL22L1Q6P5R6 122 aaKnown RBP10.79□□□□□ -0.68
SHMT2-214ENST00000554604 ARL9Q6T311 187 aa10.79□□□□□ -0.68
SHMT2-214ENST00000554604 PXKQ7Z7A4 578 aa10.79□□□□□ -0.68
SHMT2-214ENST00000554604 TMEM123Q8N131 208 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms