RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 NAA40Q86UY6 237 aa9.05□□□□□ -0.96
SHMT2-213ENST00000554600 PRIMA1Q86XR5 153 aa9.05□□□□□ -0.96
SHMT2-213ENST00000554600 PAPD5Q8NDF8 572 aaKnown RBP9.05□□□□□ -0.96
SHMT2-213ENST00000554600 OR10AD1Q8NGE0 317 aa9.05□□□□□ -0.96
SHMT2-213ENST00000554600 ITLN1Q8WWA0 313 aa9.05□□□□□ -0.96
SHMT2-213ENST00000554600 SLAMF6Q96DU3 332 aa9.05□□□□□ -0.96
SHMT2-213ENST00000554600 ZNF582Q96NG8 517 aaPredicted RBP9.05□□□□□ -0.96
SHMT2-213ENST00000554600 INTS14Q96SY0 518 aa9.05□□□□□ -0.96
SHMT2-213ENST00000554600 NMNAT2Q9BZQ4 307 aa9.05□□□□□ -0.96
SHMT2-213ENST00000554600 PNRC2Q9NPJ4 139 aaKnown RBP9.05□□□□□ -0.96
SHMT2-213ENST00000554600 UBAP1Q9NZ09 502 aa9.05□□□□□ -0.96
SHMT2-213ENST00000554600 LPAR3Q9UBY5 353 aa9.05□□□□□ -0.96
SHMT2-213ENST00000554600 WIPI2Q9Y4P8 454 aa9.05□□□□□ -0.96
SHMT2-213ENST00000554600 STAB1Q9NY15 2570 aa9.05□□□□□ -0.96
SHMT2-213ENST00000554600 KIAA1324LA8MWY0 1029 aaPredicted RBP9.04□□□□□ -0.96
SHMT2-213ENST00000554600 B4DSR2 109 aa9.04□□□□□ -0.96
SHMT2-213ENST00000554600 GLCEO94923 617 aa9.04□□□□□ -0.96
SHMT2-213ENST00000554600 IFNA2P01563 188 aa9.04□□□□□ -0.96
SHMT2-213ENST00000554600 CD55P08174 381 aa9.04□□□□□ -0.96
SHMT2-213ENST00000554600 SELEP16581 610 aa9.04□□□□□ -0.96
SHMT2-213ENST00000554600 FASP25445 335 aa9.04□□□□□ -0.96
SHMT2-213ENST00000554600 HSD11B1P28845 292 aa9.04□□□□□ -0.96
SHMT2-213ENST00000554600 GSTT1P30711 240 aa9.04□□□□□ -0.96
SHMT2-213ENST00000554600 RSPO1Q2MKA7 263 aaPredicted RBP9.04□□□□□ -0.96
SHMT2-213ENST00000554600 CR1LQ2VPA4 569 aa9.04□□□□□ -0.96
SHMT2-213ENST00000554600 FAM120AOSQ5T036 256 aa9.04□□□□□ -0.96
SHMT2-213ENST00000554600 TMEM236Q5W0B7 351 aa9.04□□□□□ -0.96
SHMT2-213ENST00000554600 Q6ZR03 302 aa9.04□□□□□ -0.96
SHMT2-213ENST00000554600 PGAP1Q75T13 922 aa9.04□□□□□ -0.96
SHMT2-213ENST00000554600 DPY19L4Q7Z388 723 aa9.04□□□□□ -0.96
SHMT2-213ENST00000554600 GLCCI1Q86VQ1 547 aa9.04□□□□□ -0.96
SHMT2-213ENST00000554600 ZNF283Q8N7M2 679 aa9.04□□□□□ -0.96
SHMT2-213ENST00000554600 OR8G5Q8NG78 346 aa9.04□□□□□ -0.96
SHMT2-213ENST00000554600 OR10S1Q8NGN2 331 aa9.04□□□□□ -0.96
SHMT2-213ENST00000554600 OR13G1Q8NGZ3 307 aa9.04□□□□□ -0.96
SHMT2-213ENST00000554600 OR5K1Q8NHB7 308 aa9.04□□□□□ -0.96
SHMT2-213ENST00000554600 SPRYD4Q8WW59 207 aaPredicted RBP9.04□□□□□ -0.96
SHMT2-213ENST00000554600 RAB39BQ96DA2 213 aa9.04□□□□□ -0.96
SHMT2-213ENST00000554600 ZMYND19Q96E35 227 aaPredicted RBP9.04□□□□□ -0.96
SHMT2-213ENST00000554600 OR2V2Q96R30 315 aa9.04□□□□□ -0.96
SHMT2-213ENST00000554600 GAL3ST1Q99999 423 aa9.04□□□□□ -0.96
SHMT2-213ENST00000554600 C1QTNF5Q9BXJ0 243 aa9.04□□□□□ -0.96
SHMT2-213ENST00000554600 PAPOLBQ9NRJ5 636 aaKnown RBP9.04□□□□□ -0.96
SHMT2-213ENST00000554600 AP4S1Q9Y587 144 aa9.04□□□□□ -0.96
SHMT2-213ENST00000554600 IGHV3-64DA0A0J9YX35 117 aa9.03□□□□□ -0.96
SHMT2-213ENST00000554600 GGT3PA6NGU5 568 aa9.03□□□□□ -0.96
SHMT2-213ENST00000554600 FAM157AC9JC47 383 aa9.03□□□□□ -0.96
SHMT2-213ENST00000554600 ZNF878C9JN71 531 aa9.03□□□□□ -0.96
SHMT2-213ENST00000554600 EBAG9O00559 213 aa9.03□□□□□ -0.96
SHMT2-213ENST00000554600 TBX1O43435 398 aa9.03□□□□□ -0.96
SHMT2-213ENST00000554600 ANXA2P07355 339 aaKnown RBP9.03□□□□□ -0.96
SHMT2-213ENST00000554600 FAM157CP0CG43 387 aa9.03□□□□□ -0.96
SHMT2-213ENST00000554600 SLC2A1P11166 492 aa9.03□□□□□ -0.96
SHMT2-213ENST00000554600 PSKH1P11801 424 aa9.03□□□□□ -0.96
SHMT2-213ENST00000554600 SRD5A1P18405 259 aa9.03□□□□□ -0.96
SHMT2-213ENST00000554600 SRP14P37108 136 aaKnown RBP9.03□□□□□ -0.96
SHMT2-213ENST00000554600 SLC15A1P46059 708 aa9.03□□□□□ -0.96
SHMT2-213ENST00000554600 HNRNPA0Q13151 305 aaKnown RBP9.03□□□□□ -0.96
SHMT2-213ENST00000554600 GK2Q14410 553 aaPredicted RBP9.03□□□□□ -0.96
SHMT2-213ENST00000554600 ATP6AP1Q15904 470 aa9.03□□□□□ -0.96
SHMT2-213ENST00000554600 SNAPC1Q16533 368 aa9.03□□□□□ -0.96
SHMT2-213ENST00000554600 LINC01590Q5TEZ4 76 aa9.03□□□□□ -0.96
SHMT2-213ENST00000554600 COLCA1Q6ZS62 124 aa9.03□□□□□ -0.96
SHMT2-213ENST00000554600 CXXC5Q7LFL8 322 aaKnown RBP9.03□□□□□ -0.96
SHMT2-213ENST00000554600 SHFQ7M4L6 423 aa9.03□□□□□ -0.96
SHMT2-213ENST00000554600 AMIGO2Q86SJ2 522 aa9.03□□□□□ -0.96
SHMT2-213ENST00000554600 CPOQ8IVL8 374 aa9.03□□□□□ -0.96
SHMT2-213ENST00000554600 OR2AE1Q8NHA4 323 aa9.03□□□□□ -0.96
SHMT2-213ENST00000554600 DNAJC9Q8WXX5 260 aa9.03□□□□□ -0.96
SHMT2-213ENST00000554600 NRBF2Q96F24 287 aa9.03□□□□□ -0.96
SHMT2-213ENST00000554600 KCNJ15Q99712 375 aa9.03□□□□□ -0.96
SHMT2-213ENST00000554600 ZNF665Q9H7R5 613 aa9.03□□□□□ -0.96
SHMT2-213ENST00000554600 NTN4Q9HB63 628 aa9.03□□□□□ -0.96
SHMT2-213ENST00000554600 KRT84Q9NSB2 600 aa9.03□□□□□ -0.96
SHMT2-213ENST00000554600 DDX28Q9NUL7 540 aaKnown RBP9.03□□□□□ -0.96
SHMT2-213ENST00000554600 TMEM100Q9NV29 134 aa9.03□□□□□ -0.96
SHMT2-213ENST00000554600 TMEM160Q9NX00 188 aa9.03□□□□□ -0.96
SHMT2-213ENST00000554600 TVP23BQ9NYZ1 205 aa9.03□□□□□ -0.96
SHMT2-213ENST00000554600 DNAJC27Q9NZQ0 273 aa9.03□□□□□ -0.96
SHMT2-213ENST00000554600 IL19Q9UHD0 177 aa9.03□□□□□ -0.96
SHMT2-213ENST00000554600 TMEFF2Q9UIK5 374 aaPredicted RBP9.03□□□□□ -0.96
SHMT2-213ENST00000554600 PCDHB10Q9UN67 800 aa9.03□□□□□ -0.96
SHMT2-213ENST00000554600 PPP1R3CQ9UQK1 317 aa9.03□□□□□ -0.96
SHMT2-213ENST00000554600 MXRA5Q9NR99 2828 aa9.02□□□□□ -0.97
SHMT2-213ENST00000554600 IQCF6A8MYZ5 107 aa9.02□□□□□ -0.97
SHMT2-213ENST00000554600 F5H5P2 479 aa9.02□□□□□ -0.97
SHMT2-213ENST00000554600 G3V2T6 193 aa9.02□□□□□ -0.97
SHMT2-213ENST00000554600 H0YL77 283 aa9.02□□□□□ -0.97
SHMT2-213ENST00000554600 SELENOFO60613 162 aa9.02□□□□□ -0.97
SHMT2-213ENST00000554600 HLA-DPB1P04440 258 aa9.02□□□□□ -0.97
SHMT2-213ENST00000554600 SBK2P0C263 348 aa9.02□□□□□ -0.97
SHMT2-213ENST00000554600 FCGR1AP12314 374 aa9.02□□□□□ -0.97
SHMT2-213ENST00000554600 PCMT1P22061 227 aa9.02□□□□□ -0.97
SHMT2-213ENST00000554600 RBMXP38159 391 aaKnown RBP9.02□□□□□ -0.97
SHMT2-213ENST00000554600 NAA10P41227 235 aaPredicted RBP9.02□□□□□ -0.97
SHMT2-213ENST00000554600 CX3CR1P49238 355 aa9.02□□□□□ -0.97
SHMT2-213ENST00000554600 SRP9P49458 86 aaKnown RBP9.02□□□□□ -0.97
SHMT2-213ENST00000554600 DAPP51397 102 aa9.02□□□□□ -0.97
SHMT2-213ENST00000554600 CRISP1P54107 249 aa9.02□□□□□ -0.97
SHMT2-213ENST00000554600 RAD23AP54725 363 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms