RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 ZNF514Q96K75 400 aaPredicted RBP8.56□□□□□ -1.04
SIX4-202ENST00000554079 PRRT1Q99946 306 aa8.56□□□□□ -1.04
SIX4-202ENST00000554079 ALKBH7Q9BT30 221 aaPredicted RBP8.56□□□□□ -1.04
SIX4-202ENST00000554079 SGPP1Q9BX95 441 aa8.56□□□□□ -1.04
SIX4-202ENST00000554079 MAGEH1Q9H213 219 aa8.56□□□□□ -1.04
SIX4-202ENST00000554079 PRM3Q9NNZ6 103 aa8.56□□□□□ -1.04
SIX4-202ENST00000554079 LUZP4Q9P127 313 aa8.56□□□□□ -1.04
SIX4-202ENST00000554079 FBXL17Q9UF56 701 aa8.56□□□□□ -1.04
SIX4-202ENST00000554079 CDC40O60508 579 aaKnown RBP eCLIP8.56□□□□□ -1.04
SIX4-202ENST00000554079 SCGNO76038 276 aa8.56□□□□□ -1.04
SIX4-202ENST00000554079 JTBO76095 146 aa8.56□□□□□ -1.04
SIX4-202ENST00000554079 NDUFB8O95169 186 aa8.56□□□□□ -1.04
SIX4-202ENST00000554079 CYB5AP00167 134 aa8.56□□□□□ -1.04
SIX4-202ENST00000554079 CYB5R3P00387 301 aaPredicted RBP8.56□□□□□ -1.04
SIX4-202ENST00000554079 HPRT1P00492 218 aa8.56□□□□□ -1.04
SIX4-202ENST00000554079 LGALS2P05162 132 aa8.56□□□□□ -1.04
SIX4-202ENST00000554079 MMP3P08254 477 aa8.56□□□□□ -1.04
SIX4-202ENST00000554079 F3P13726 295 aa8.56□□□□□ -1.04
SIX4-202ENST00000554079 CXCR1P25024 350 aa8.56□□□□□ -1.04
SIX4-202ENST00000554079 PPP1CCP36873 323 aaKnown RBP8.56□□□□□ -1.04
SIX4-202ENST00000554079 WNT5AP41221 380 aa8.56□□□□□ -1.04
SIX4-202ENST00000554079 NAA10P41227 235 aaPredicted RBP8.56□□□□□ -1.04
SIX4-202ENST00000554079 FHITP49789 147 aa8.56□□□□□ -1.04
SIX4-202ENST00000554079 POLR2HP52434 150 aaKnown RBP8.56□□□□□ -1.04
SIX4-202ENST00000554079 ELLP55199 621 aaPredicted RBP8.56□□□□□ -1.04
SIX4-202ENST00000554079 BACE1P56817 501 aa8.56□□□□□ -1.04
SIX4-202ENST00000554079 COL10A1Q03692 680 aa8.56□□□□□ -1.04
SIX4-202ENST00000554079 EIF2B1Q14232 305 aaKnown RBP8.56□□□□□ -1.04
SIX4-202ENST00000554079 Q499Y3 187 aa8.56□□□□□ -1.04
SIX4-202ENST00000554079 AGTRAPQ6RW13 159 aa8.56□□□□□ -1.04
SIX4-202ENST00000554079 FAM219AQ8IW50 185 aa8.56□□□□□ -1.04
SIX4-202ENST00000554079 ZNF100Q8IYN0 542 aa8.56□□□□□ -1.04
SIX4-202ENST00000554079 GBGT1Q8N5D6 347 aa8.56□□□□□ -1.04
SIX4-202ENST00000554079 POC1AQ8NBT0 407 aa8.56□□□□□ -1.04
SIX4-202ENST00000554079 OR1L6Q8NGR2 347 aa8.56□□□□□ -1.04
SIX4-202ENST00000554079 ORAOV1Q8WV07 137 aa8.56□□□□□ -1.04
SIX4-202ENST00000554079 DNAJB3Q8WWF6 145 aa8.56□□□□□ -1.04
SIX4-202ENST00000554079 ZMYND19Q96E35 227 aaPredicted RBP8.56□□□□□ -1.04
SIX4-202ENST00000554079 RARRES2Q99969 163 aa8.56□□□□□ -1.04
SIX4-202ENST00000554079 C20orf144Q9BQM9 153 aa8.56□□□□□ -1.04
SIX4-202ENST00000554079 MIEN1Q9BRT3 115 aa8.56□□□□□ -1.04
SIX4-202ENST00000554079 CSTL1Q9H114 145 aa8.56□□□□□ -1.04
SIX4-202ENST00000554079 SLCO5A1Q9H2Y9 848 aa8.56□□□□□ -1.04
SIX4-202ENST00000554079 SIDT1Q9NXL6 827 aaKnown RBP8.56□□□□□ -1.04
SIX4-202ENST00000554079 KIAA1549LQ6ZVL6 1849 aa8.55□□□□□ -1.04
SIX4-202ENST00000554079 TRBV5-7A0A0A0MS05 114 aa8.55□□□□□ -1.04
SIX4-202ENST00000554079 CCDC163A0A0D9SF12 145 aa8.55□□□□□ -1.04
SIX4-202ENST00000554079 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.55□□□□□ -1.04
SIX4-202ENST00000554079 RIIAD1A6NNX1 92 aa8.55□□□□□ -1.04
SIX4-202ENST00000554079 GRM6O15303 877 aa8.55□□□□□ -1.04
SIX4-202ENST00000554079 FCMRO60667 390 aa8.55□□□□□ -1.04
SIX4-202ENST00000554079 CSN2P05814 226 aa8.55□□□□□ -1.04
SIX4-202ENST00000554079 SRP19P09132 144 aaKnown RBP8.55□□□□□ -1.04
SIX4-202ENST00000554079 FUT3P21217 361 aa8.55□□□□□ -1.04
SIX4-202ENST00000554079 HOXC8P31273 242 aa8.55□□□□□ -1.04
SIX4-202ENST00000554079 CCKARP32238 428 aa8.55□□□□□ -1.04
SIX4-202ENST00000554079 CAMLGP49069 296 aa8.55□□□□□ -1.04
SIX4-202ENST00000554079 PRPS1P60891 318 aa8.55□□□□□ -1.04
SIX4-202ENST00000554079 SPEM2Q0P670 501 aa8.55□□□□□ -1.04
SIX4-202ENST00000554079 NKAIN1Q4KMZ8 207 aa8.55□□□□□ -1.04
SIX4-202ENST00000554079 SPRYD7Q5W111 196 aa8.55□□□□□ -1.04
SIX4-202ENST00000554079 CFAP161Q6P656 301 aa8.55□□□□□ -1.04
SIX4-202ENST00000554079 MRPL41Q8IXM3 137 aaKnown RBP8.55□□□□□ -1.04
SIX4-202ENST00000554079 C12orf76Q8N812 135 aaPredicted RBP8.55□□□□□ -1.04
SIX4-202ENST00000554079 KLHDC9Q8NEP7 349 aa8.55□□□□□ -1.04
SIX4-202ENST00000554079 LFNGQ8NES3 379 aa8.55□□□□□ -1.04
SIX4-202ENST00000554079 OR14L1PQ8NHC6 308 aa8.55□□□□□ -1.04
SIX4-202ENST00000554079 FAM174AQ8TBP5 190 aa8.55□□□□□ -1.04
SIX4-202ENST00000554079 METTL21AQ8WXB1 218 aa8.55□□□□□ -1.04
SIX4-202ENST00000554079 TSLPQ969D9 159 aa8.55□□□□□ -1.04
SIX4-202ENST00000554079 FBXO32Q969P5 355 aa8.55□□□□□ -1.04
SIX4-202ENST00000554079 C16orf58Q96GQ5 468 aa8.55□□□□□ -1.04
SIX4-202ENST00000554079 COMMD4Q9H0A8 199 aa8.55□□□□□ -1.04
SIX4-202ENST00000554079 RAB18Q9NP72 206 aa8.55□□□□□ -1.04
SIX4-202ENST00000554079 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.55□□□□□ -1.04
SIX4-202ENST00000554079 ZDHHC3Q9NYG2 299 aa8.55□□□□□ -1.04
SIX4-202ENST00000554079 B3GAT1Q9P2W7 334 aa8.55□□□□□ -1.04
SIX4-202ENST00000554079 SERGEFQ9UGK8 458 aa8.55□□□□□ -1.04
SIX4-202ENST00000554079 DKKL1Q9UK85 242 aa8.55□□□□□ -1.04
SIX4-202ENST00000554079 RAB22AQ9UL26 194 aa8.55□□□□□ -1.04
SIX4-202ENST00000554079 KCNK6Q9Y257 313 aa8.55□□□□□ -1.04
SIX4-202ENST00000554079 TRBV24-1A0A075B6N3 115 aa8.54□□□□□ -1.04
SIX4-202ENST00000554079 ZNF860A6NHJ4 632 aa8.54□□□□□ -1.04
SIX4-202ENST00000554079 CBY3A6NI87 242 aa8.54□□□□□ -1.04
SIX4-202ENST00000554079 PRR32B1ATL7 298 aa8.54□□□□□ -1.04
SIX4-202ENST00000554079 FTCDNL1E5RQL4 147 aa8.54□□□□□ -1.04
SIX4-202ENST00000554079 PPP5D1E7EU14 171 aa8.54□□□□□ -1.04
SIX4-202ENST00000554079 H3BNC9 293 aa8.54□□□□□ -1.04
SIX4-202ENST00000554079 M0QZQ0 153 aa8.54□□□□□ -1.04
SIX4-202ENST00000554079 ZNF264O43296 627 aa8.54□□□□□ -1.04
SIX4-202ENST00000554079 ERAL1O75616 437 aaKnown RBP8.54□□□□□ -1.04
SIX4-202ENST00000554079 STK17BO94768 372 aa8.54□□□□□ -1.04
SIX4-202ENST00000554079 IGLV3-27P01718 113 aa8.54□□□□□ -1.04
SIX4-202ENST00000554079 SEC11BP0C7V7 166 aa8.54□□□□□ -1.04
SIX4-202ENST00000554079 S100A7P31151 101 aa8.54□□□□□ -1.04
SIX4-202ENST00000554079 LSSP48449 732 aa8.54□□□□□ -1.04
SIX4-202ENST00000554079 KHKP50053 298 aa8.54□□□□□ -1.04
SIX4-202ENST00000554079 EFEMP1Q12805 493 aa8.54□□□□□ -1.04
SIX4-202ENST00000554079 GAS6Q14393 721 aa8.54□□□□□ -1.04
SIX4-202ENST00000554079 AGERQ15109 404 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms