RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 AP3S1Q92572 193 aa7.58□□□□□ -1.2
TDP1-208ENST00000553989 GCDHQ92947 438 aaPredicted RBP7.58□□□□□ -1.2
TDP1-208ENST00000553989 SLC35B4Q969S0 331 aa7.58□□□□□ -1.2
TDP1-208ENST00000553989 WDFY2Q96P53 400 aa7.58□□□□□ -1.2
TDP1-208ENST00000553989 FUZQ9BT04 418 aa7.58□□□□□ -1.2
TDP1-208ENST00000553989 OR51B6Q9H340 312 aa7.58□□□□□ -1.2
TDP1-208ENST00000553989 EVA1AQ9H8M9 152 aa7.58□□□□□ -1.2
TDP1-208ENST00000553989 C12orf10Q9HB07 376 aa7.58□□□□□ -1.2
TDP1-208ENST00000553989 TMEM27Q9HBJ8 222 aa7.58□□□□□ -1.2
TDP1-208ENST00000553989 FGF20Q9NP95 211 aaPredicted RBP7.58□□□□□ -1.2
TDP1-208ENST00000553989 ZNF275Q9NSD4 429 aaPredicted RBP7.58□□□□□ -1.2
TDP1-208ENST00000553989 TESQ9UGI8 421 aaKnown RBP7.58□□□□□ -1.2
TDP1-208ENST00000553989 FBXL3Q9UKT7 428 aa7.58□□□□□ -1.2
TDP1-208ENST00000553989 ZNF346Q9UL40 294 aaKnown RBP7.58□□□□□ -1.2
TDP1-208ENST00000553989 STUB1Q9UNE7 303 aa7.58□□□□□ -1.2
TDP1-208ENST00000553989 GSTK1Q9Y2Q3 226 aa7.58□□□□□ -1.2
TDP1-208ENST00000553989 EXOSC1Q9Y3B2 195 aaKnown RBP7.58□□□□□ -1.2
TDP1-208ENST00000553989 IGKV1D-42A0A075B6H8 117 aa7.57□□□□□ -1.2
TDP1-208ENST00000553989 TRBV4-1A0A0J9YWV2 114 aa7.57□□□□□ -1.2
TDP1-208ENST00000553989 C11orf98E9PRG8 122 aa7.57□□□□□ -1.2
TDP1-208ENST00000553989 ZNF670-ZNF695F2Z2N8 137 aa7.57□□□□□ -1.2
TDP1-208ENST00000553989 TRIM77I1YAP6 450 aa7.57□□□□□ -1.2
TDP1-208ENST00000553989 J3KTA2 159 aa7.57□□□□□ -1.2
TDP1-208ENST00000553989 TBX1O43435 398 aa7.57□□□□□ -1.2
TDP1-208ENST00000553989 CDC14BO60729 498 aa7.57□□□□□ -1.2
TDP1-208ENST00000553989 ATP6V1G1O75348 118 aa7.57□□□□□ -1.2
TDP1-208ENST00000553989 PNPP00491 289 aa7.57□□□□□ -1.2
TDP1-208ENST00000553989 IGFBP1P08833 259 aaPredicted RBP7.57□□□□□ -1.2
TDP1-208ENST00000553989 TRAPPC2P0DI81 140 aa7.57□□□□□ -1.2
TDP1-208ENST00000553989 TRAPPC2BP0DI82 140 aa7.57□□□□□ -1.2
TDP1-208ENST00000553989 ZNF35P13682 527 aa7.57□□□□□ -1.2
TDP1-208ENST00000553989 ZNF14P17017 642 aaPredicted RBP7.57□□□□□ -1.2
TDP1-208ENST00000553989 MYL12AP19105 171 aa7.57□□□□□ -1.2
TDP1-208ENST00000553989 TNFRSF1BP20333 461 aa7.57□□□□□ -1.2
TDP1-208ENST00000553989 TNFSF8P32971 234 aa7.57□□□□□ -1.2
TDP1-208ENST00000553989 SMCPP49901 116 aaPredicted RBP7.57□□□□□ -1.2
TDP1-208ENST00000553989 EFNB1P98172 346 aa7.57□□□□□ -1.2
TDP1-208ENST00000553989 CDK5Q00535 292 aa7.57□□□□□ -1.2
TDP1-208ENST00000553989 SCN1BQ07699 218 aa7.57□□□□□ -1.2
TDP1-208ENST00000553989 RAB40BQ12829 278 aa7.57□□□□□ -1.2
TDP1-208ENST00000553989 TPBGQ13641 420 aa7.57□□□□□ -1.2
TDP1-208ENST00000553989 GINS1Q14691 196 aa7.57□□□□□ -1.2
TDP1-208ENST00000553989 TRAM2Q15035 370 aa7.57□□□□□ -1.2
TDP1-208ENST00000553989 MSMPQ1L6U9 139 aa7.57□□□□□ -1.2
TDP1-208ENST00000553989 STEAP3Q658P3 488 aa7.57□□□□□ -1.2
TDP1-208ENST00000553989 PGBD2Q6P3X8 592 aa7.57□□□□□ -1.2
TDP1-208ENST00000553989 METAP1DQ6UB28 335 aaPredicted RBP7.57□□□□□ -1.2
TDP1-208ENST00000553989 TMPRSS11AQ6ZMR5 421 aa7.57□□□□□ -1.2
TDP1-208ENST00000553989 ZBTB46Q86UZ6 589 aa7.57□□□□□ -1.2
TDP1-208ENST00000553989 RANBP3LQ86VV4 465 aaPredicted RBP7.57□□□□□ -1.2
TDP1-208ENST00000553989 LRP11Q86VZ4 500 aa7.57□□□□□ -1.2
TDP1-208ENST00000553989 TEX29Q8N6K0 151 aa7.57□□□□□ -1.2
TDP1-208ENST00000553989 LSMEM1Q8N8F7 131 aa7.57□□□□□ -1.2
TDP1-208ENST00000553989 GDPD1Q8N9F7 314 aa7.57□□□□□ -1.2
TDP1-208ENST00000553989 SEMA6DQ8NFY4 1073 aa7.57□□□□□ -1.2
TDP1-208ENST00000553989 GPR32P1Q8NGA4 272 aa7.57□□□□□ -1.2
TDP1-208ENST00000553989 RFKQ969G6 155 aa7.57□□□□□ -1.2
TDP1-208ENST00000553989 ZMYND19Q96E35 227 aaPredicted RBP7.57□□□□□ -1.2
TDP1-208ENST00000553989 LRR1Q96L50 414 aa7.57□□□□□ -1.2
TDP1-208ENST00000553989 JMJD8Q96S16 334 aa7.57□□□□□ -1.2
TDP1-208ENST00000553989 CENPOQ9BU64 300 aa7.57□□□□□ -1.2
TDP1-208ENST00000553989 ZNF416Q9BWM5 594 aa7.57□□□□□ -1.2
TDP1-208ENST00000553989 TSSK6Q9BXA6 273 aa7.57□□□□□ -1.2
TDP1-208ENST00000553989 POLR2J2Q9GZM3 115 aaKnown RBP7.57□□□□□ -1.2
TDP1-208ENST00000553989 RNF121Q9H920 327 aa7.57□□□□□ -1.2
TDP1-208ENST00000553989 CDH20Q9HBT6 801 aa7.57□□□□□ -1.2
TDP1-208ENST00000553989 B3GNT2Q9NY97 397 aa7.57□□□□□ -1.2
TDP1-208ENST00000553989 MYEF2Q9P2K5 600 aaKnown RBP7.57□□□□□ -1.2
TDP1-208ENST00000553989 GPR160Q9UJ42 338 aa7.57□□□□□ -1.2
TDP1-208ENST00000553989 PCDHB10Q9UN67 800 aa7.57□□□□□ -1.2
TDP1-208ENST00000553989 LSM2Q9Y333 95 aaKnown RBP7.57□□□□□ -1.2
TDP1-208ENST00000553989 LOC105371242A0A075B767 164 aa7.56□□□□□ -1.2
TDP1-208ENST00000553989 TRAV20A0A0B4J274 112 aa7.56□□□□□ -1.2
TDP1-208ENST00000553989 LOC102725191A0A1B0GVB3 256 aa7.56□□□□□ -1.2
TDP1-208ENST00000553989 IQCMA0A1B0GVH7 501 aa7.56□□□□□ -1.2
TDP1-208ENST00000553989 MS4A18H0YCH9 400 aa7.56□□□□□ -1.2
TDP1-208ENST00000553989 WNT9BO14905 357 aa7.56□□□□□ -1.2
TDP1-208ENST00000553989 MYL12BO14950 172 aa7.56□□□□□ -1.2
TDP1-208ENST00000553989 GPX5O75715 221 aa7.56□□□□□ -1.2
TDP1-208ENST00000553989 NCR1O76036 304 aa7.56□□□□□ -1.2
TDP1-208ENST00000553989 FARS2O95363 451 aaKnown RBP7.56□□□□□ -1.2
TDP1-208ENST00000553989 BGLAPP02818 100 aa7.56□□□□□ -1.2
TDP1-208ENST00000553989 KRT8P05787 483 aa7.56□□□□□ -1.2
TDP1-208ENST00000553989 PATE4P0C8F1 98 aa7.56□□□□□ -1.2
TDP1-208ENST00000553989 CPEP16870 476 aa7.56□□□□□ -1.2
TDP1-208ENST00000553989 EPHA1P21709 976 aa7.56□□□□□ -1.2
TDP1-208ENST00000553989 GALP22466 123 aa7.56□□□□□ -1.2
TDP1-208ENST00000553989 S100A1P23297 94 aa7.56□□□□□ -1.2
TDP1-208ENST00000553989 CRYBB2P43320 205 aa7.56□□□□□ -1.2
TDP1-208ENST00000553989 RAD52P43351 418 aa7.56□□□□□ -1.2
TDP1-208ENST00000553989 MAGEB1P43366 347 aa7.56□□□□□ -1.2
TDP1-208ENST00000553989 BIDP55957 195 aa7.56□□□□□ -1.2
TDP1-208ENST00000553989 TMEM33P57088 247 aa7.56□□□□□ -1.2
TDP1-208ENST00000553989 CCL8P80075 99 aa7.56□□□□□ -1.2
TDP1-208ENST00000553989 ST3GAL3Q11203 375 aa7.56□□□□□ -1.2
TDP1-208ENST00000553989 GPR50Q13585 617 aa7.56□□□□□ -1.2
TDP1-208ENST00000553989 OR1Q1Q15612 314 aa7.56□□□□□ -1.2
TDP1-208ENST00000553989 MS4A18Q3C1V0 323 aa7.56□□□□□ -1.2
TDP1-208ENST00000553989 CCDC92Q53HC0 331 aaPredicted RBP7.56□□□□□ -1.2
TDP1-208ENST00000553989 AVPI1Q5T686 147 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms